RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 KLRF2D3W0D1 207 aa28.82■■■□□ 2.2
RAPGEF1-206ENST00000438647 NFIBO00712 420 aa28.82■■■□□ 2.2
RAPGEF1-206ENST00000438647 PRC1O43663 620 aa28.82■■■□□ 2.2
RAPGEF1-206ENST00000438647 EVI5O60447 810 aa28.82■■■□□ 2.2
RAPGEF1-206ENST00000438647 TAL1P17542 331 aaPredicted RBP28.82■■■□□ 2.2
RAPGEF1-206ENST00000438647 CCDC144CPQ8IYA2 1237 aa28.82■■■□□ 2.2
RAPGEF1-206ENST00000438647 TMTC2Q8N394 836 aa28.82■■■□□ 2.2
RAPGEF1-206ENST00000438647 TMEM87BQ96K49 555 aa28.82■■■□□ 2.2
RAPGEF1-206ENST00000438647 MAD2L2Q9UI95 211 aa28.82■■■□□ 2.2
RAPGEF1-206ENST00000438647 FAM184BQ9ULE4 1060 aa28.82■■■□□ 2.2
RAPGEF1-206ENST00000438647 PTPDC1A2A3K4 754 aa28.81■■■□□ 2.2
RAPGEF1-206ENST00000438647 PALM3A6NDB9 673 aaPredicted RBP28.81■■■□□ 2.2
RAPGEF1-206ENST00000438647 COL6A1P12109 1028 aa28.81■■■□□ 2.2
RAPGEF1-206ENST00000438647 ACVR2BQ13705 512 aa28.81■■■□□ 2.2
RAPGEF1-206ENST00000438647 GRM4Q14833 912 aa28.81■■■□□ 2.2
RAPGEF1-206ENST00000438647 USH1GQ495M9 461 aa28.81■■■□□ 2.2
RAPGEF1-206ENST00000438647 STAG2Q8N3U4 1231 aa28.81■■■□□ 2.2
RAPGEF1-206ENST00000438647 MAF1Q9H063 256 aa28.81■■■□□ 2.2
RAPGEF1-206ENST00000438647 ADD3Q9UEY8 706 aaKnown RBP28.81■■■□□ 2.2
RAPGEF1-206ENST00000438647 ABCB11O95342 1321 aa28.8■■■□□ 2.2
RAPGEF1-206ENST00000438647 SOWAHBA6NEL2 793 aa28.8■■■□□ 2.2
RAPGEF1-206ENST00000438647 KBTBD13C9JR72 458 aa28.8■■■□□ 2.2
RAPGEF1-206ENST00000438647 TROAPQ12815 778 aa28.8■■■□□ 2.2
RAPGEF1-206ENST00000438647 BAATQ14032 418 aaPredicted RBP28.8■■■□□ 2.2
RAPGEF1-206ENST00000438647 CLEC4DQ8WXI8 215 aa28.8■■■□□ 2.2
RAPGEF1-206ENST00000438647 JMJD4Q9H9V9 463 aa28.8■■■□□ 2.2
RAPGEF1-206ENST00000438647 LY9Q9HBG7 655 aa28.8■■■□□ 2.2
RAPGEF1-206ENST00000438647 SENP2Q9HC62 589 aa28.8■■■□□ 2.2
RAPGEF1-206ENST00000438647 VAT1LQ9HCJ6 419 aa28.8■■■□□ 2.2
RAPGEF1-206ENST00000438647 XPNPEP3Q9NQH7 507 aa28.8■■■□□ 2.2
RAPGEF1-206ENST00000438647 SMCHD1A6NHR9 2005 aa28.79■■■□□ 2.2
RAPGEF1-206ENST00000438647 LOC102724159A0A0B4J2E5 919 aa28.79■■■□□ 2.2
RAPGEF1-206ENST00000438647 PWP2Q15269 919 aaKnown RBP28.79■■■□□ 2.2
RAPGEF1-206ENST00000438647 QRICH1Q2TAL8 776 aa28.79■■■□□ 2.2
RAPGEF1-206ENST00000438647 RNF207Q6ZRF8 634 aa28.79■■■□□ 2.2
RAPGEF1-206ENST00000438647 KRT32Q14532 448 aa28.78■■■□□ 2.2
RAPGEF1-206ENST00000438647 FBXO11Q86XK2 927 aa28.78■■■□□ 2.2
RAPGEF1-206ENST00000438647 RGS22Q8NE09 1264 aa28.78■■■□□ 2.2
RAPGEF1-206ENST00000438647 MAP3K14Q99558 947 aa28.78■■■□□ 2.2
RAPGEF1-206ENST00000438647 DDAH1O94760 285 aa28.77■■■□□ 2.2
RAPGEF1-206ENST00000438647 MYCNP04198 464 aaPredicted RBP28.77■■■□□ 2.2
RAPGEF1-206ENST00000438647 GJC2Q5T442 439 aaPredicted RBP28.77■■■□□ 2.2
RAPGEF1-206ENST00000438647 NFXL1Q6ZNB6 911 aa28.77■■■□□ 2.2
RAPGEF1-206ENST00000438647 RNF180Q86T96 592 aa28.77■■■□□ 2.2
RAPGEF1-206ENST00000438647 MPHOSPH6Q99547 160 aaKnown RBP28.77■■■□□ 2.2
RAPGEF1-206ENST00000438647 SENP6Q9GZR1 1112 aaPredicted RBP28.77■■■□□ 2.2
RAPGEF1-206ENST00000438647 MRPL11Q9Y3B7 192 aaKnown RBP28.77■■■□□ 2.2
RAPGEF1-206ENST00000438647 CCDC69A6NI79 296 aa28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 H0YGN5 161 aa28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 SH2B2O14492 632 aaPredicted RBP28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 REC8O95072 547 aa28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 CALML3P27482 149 aa28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 KIF5BP33176 963 aa28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 LIFRP42702 1097 aa28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 RPS6P62753 249 aaKnown RBP28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 TRAF1Q13077 416 aa28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 LRRC41Q15345 812 aa28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 TSGA10IPQ3SY00 556 aa28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 MCF2L2Q86YR7 1114 aa28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 ZNF654Q8IZM8 581 aa28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 CTCFLQ8NI51 663 aaPredicted RBP28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 NUP133Q8WUM0 1156 aa28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 NEK1Q96PY6 1258 aa28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 AMNQ9BXJ7 453 aa28.76■■■□□ 2.19
RAPGEF1-206ENST00000438647 ASTN1O14525 1302 aa28.75■■■□□ 2.19
RAPGEF1-206ENST00000438647 ZBTB5O15062 677 aa28.75■■■□□ 2.19
RAPGEF1-206ENST00000438647 DUSP11O75319 330 aaKnown RBP28.75■■■□□ 2.19
RAPGEF1-206ENST00000438647 CCDC144BQ3MJ40 725 aa28.75■■■□□ 2.19
RAPGEF1-206ENST00000438647 SLC30A10Q6XR72 485 aa28.75■■■□□ 2.19
RAPGEF1-206ENST00000438647 MTMR8Q96EF0 704 aa28.75■■■□□ 2.19
RAPGEF1-206ENST00000438647 MCM3APO60318 1980 aa28.75■■■□□ 2.19
RAPGEF1-206ENST00000438647 ALDH5A1P51649 535 aaPredicted RBP28.74■■■□□ 2.19
RAPGEF1-206ENST00000438647 DNERQ8NFT8 737 aa28.74■■■□□ 2.19
RAPGEF1-206ENST00000438647 KATNBL1Q9H079 304 aa28.74■■■□□ 2.19
RAPGEF1-206ENST00000438647 RIOX1Q9H6W3 641 aa28.74■■■□□ 2.19
RAPGEF1-206ENST00000438647 SPC25Q9HBM1 224 aa28.74■■■□□ 2.19
RAPGEF1-206ENST00000438647 B4DLN1 442 aa28.73■■■□□ 2.19
RAPGEF1-206ENST00000438647 CEP290O15078 2479 aa28.73■■■□□ 2.19
RAPGEF1-206ENST00000438647 PGK1P00558 417 aa28.73■■■□□ 2.19
RAPGEF1-206ENST00000438647 CALM1P0DP23 149 aa28.73■■■□□ 2.19
RAPGEF1-206ENST00000438647 CALM2P0DP24 149 aa28.73■■■□□ 2.19
RAPGEF1-206ENST00000438647 CALM3P0DP25 149 aa28.73■■■□□ 2.19
RAPGEF1-206ENST00000438647 MRPL12P52815 198 aaKnown RBP28.73■■■□□ 2.19
RAPGEF1-206ENST00000438647 MORC4Q8TE76 937 aa28.73■■■□□ 2.19
RAPGEF1-206ENST00000438647 PURBQ96QR8 312 aaKnown RBP28.73■■■□□ 2.19
RAPGEF1-206ENST00000438647 HMGB1P09429 215 aaKnown RBP28.72■■■□□ 2.19
RAPGEF1-206ENST00000438647 HOMER1Q86YM7 354 aa28.72■■■□□ 2.19
RAPGEF1-206ENST00000438647 C7orf61Q8IZ16 206 aa28.72■■■□□ 2.19
RAPGEF1-206ENST00000438647 LENG1Q96BZ8 264 aaPredicted RBP28.72■■■□□ 2.19
RAPGEF1-206ENST00000438647 VTA1Q9NP79 307 aa28.72■■■□□ 2.19
RAPGEF1-206ENST00000438647 GPHNQ9NQX3 736 aaPredicted RBP28.72■■■□□ 2.19
RAPGEF1-206ENST00000438647 SLC12A7Q9Y666 1083 aa28.72■■■□□ 2.19
RAPGEF1-206ENST00000438647 MYH6P13533 1939 aa28.72■■■□□ 2.19
RAPGEF1-206ENST00000438647 ADAMTS4O75173 837 aa28.71■■■□□ 2.19
RAPGEF1-206ENST00000438647 GNAQP50148 359 aa28.71■■■□□ 2.19
RAPGEF1-206ENST00000438647 DHX32Q7L7V1 743 aaKnown RBP28.71■■■□□ 2.19
RAPGEF1-206ENST00000438647 RASEFQ8IZ41 740 aa28.71■■■□□ 2.19
RAPGEF1-206ENST00000438647 LZTS2Q9BRK4 669 aa28.71■■■□□ 2.19
RAPGEF1-206ENST00000438647 SYNRGQ9UMZ2 1314 aa28.7■■■□□ 2.19
RAPGEF1-206ENST00000438647 LRRC26Q2I0M4 334 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms