RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 CHST3Q7LGC8 479 aa13.89□□□□□ -0.19
TRERNA1-201ENST00000431460 IL17RAQ96F46 866 aa13.89□□□□□ -0.19
TRERNA1-201ENST00000431460 TMEM87BQ96K49 555 aa13.89□□□□□ -0.19
TRERNA1-201ENST00000431460 JAKMIP1Q96N16 626 aaKnown RBP13.89□□□□□ -0.19
TRERNA1-201ENST00000431460 TM6SF1Q9BZW5 370 aa13.89□□□□□ -0.19
TRERNA1-201ENST00000431460 UBA5Q9GZZ9 404 aa13.89□□□□□ -0.19
TRERNA1-201ENST00000431460 ZMYND8Q9ULU4 1186 aaPredicted RBP13.89□□□□□ -0.19
TRERNA1-201ENST00000431460 ALPK3Q96L96 1907 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 KBTBD13C9JR72 458 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 DNM1LO00429 736 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 NFIBO00712 420 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 PGK1P00558 417 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 SNHG28P0DPA3 235 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 RARBP10826 455 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 SYN1P17600 705 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 COL9A3Q14050 684 aaPredicted RBP13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 LRRC26Q2I0M4 334 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 TKFCQ3LXA3 575 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 USH1GQ495M9 461 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 TMEM67Q5HYA8 995 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 BTNL9Q6UXG8 535 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 TMTC2Q8N394 836 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 FGD4Q96M96 766 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 PURBQ96QR8 312 aaKnown RBP13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 XPNPEP3Q9NQH7 507 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 COLQQ9Y215 455 aaPredicted RBP13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 SYNGAP1Q96PV0 1343 aa13.88□□□□□ -0.19
TRERNA1-201ENST00000431460 PTPDC1A2A3K4 754 aa13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 SNAI1O95863 264 aaPredicted RBP13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 PARP1P09874 1014 aaKnown RBP13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 ZNF865P0CJ78 1059 aaPredicted RBP13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 COL6A1P12109 1028 aa13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 AKR1A1P14550 325 aa13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 LIFRP42702 1097 aa13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 WTAPQ15007 396 aa13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 GPATCH4Q5T3I0 446 aaKnown RBP13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 BLOC1S2Q6QNY1 142 aa13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 ARMCX2Q7L311 632 aa13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 CCDC144CPQ8IYA2 1237 aa13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 ARRDC4Q8NCT1 418 aa13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 FERMT2Q96AC1 680 aa13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 ZSWIM6Q9HCJ5 1215 aa13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 VAT1LQ9HCJ6 419 aa13.87□□□□□ -0.19
TRERNA1-201ENST00000431460 SOWAHBA6NEL2 793 aa13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 SH2B2O14492 632 aaPredicted RBP13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 CASTP20810 708 aaKnown RBP13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 CALML3P27482 149 aa13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 ACVR2BQ13705 512 aa13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 LRRC41Q15345 812 aa13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 CDC37Q16543 378 aaPredicted RBP13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 ASPRV1Q53RT3 343 aa13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 MAMDC4Q6UXC1 1216 aa13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 SLC30A10Q6XR72 485 aa13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 ZNF467Q7Z7K2 595 aaPredicted RBP13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 MSL3Q8N5Y2 521 aaKnown RBP13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 FAM133AQ8N9E0 248 aa13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 BACH2Q9BYV9 841 aa13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 LY9Q9HBG7 655 aa13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 SENP2Q9HC62 589 aa13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 CYP39A1Q9NYL5 469 aa13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 NRBP1Q9UHY1 535 aa13.86□□□□□ -0.19
TRERNA1-201ENST00000431460 RPS6KB1P23443 525 aa13.85□□□□□ -0.19
TRERNA1-201ENST00000431460 ADCYAP1R1P41586 468 aa13.85□□□□□ -0.19
TRERNA1-201ENST00000431460 BAATQ14032 418 aaPredicted RBP13.85□□□□□ -0.19
TRERNA1-201ENST00000431460 HABP4Q5JVS0 413 aaKnown RBP13.85□□□□□ -0.19
TRERNA1-201ENST00000431460 RUFY3Q7L099 469 aa13.85□□□□□ -0.19
TRERNA1-201ENST00000431460 EEPD1Q7L9B9 569 aa13.85□□□□□ -0.19
TRERNA1-201ENST00000431460 ADGRF4Q8IZF3 695 aa13.85□□□□□ -0.19
TRERNA1-201ENST00000431460 STAG2Q8N3U4 1231 aa13.85□□□□□ -0.19
TRERNA1-201ENST00000431460 FBXL16Q8N461 479 aa13.85□□□□□ -0.19
TRERNA1-201ENST00000431460 FAM184BQ9ULE4 1060 aa13.85□□□□□ -0.19
TRERNA1-201ENST00000431460 CYP46A1Q9Y6A2 500 aa13.85□□□□□ -0.19
TRERNA1-201ENST00000431460 ASTN1O14525 1302 aa13.85□□□□□ -0.19
TRERNA1-201ENST00000431460 SYNRGQ9UMZ2 1314 aa13.85□□□□□ -0.19
TRERNA1-201ENST00000431460 ADCY6O43306 1168 aa13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 CPA1P15085 419 aa13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 RBM25P49756 843 aaKnown RBP13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 IRX5P78411 483 aaPredicted RBP13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 CCDC144BQ3MJ40 725 aa13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 NOL8Q76FK4 1167 aaKnown RBP13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 CATIPQ7Z7H3 387 aa13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 RNF180Q86T96 592 aa13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 SGMS1Q86VZ5 419 aa13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 FBXO16Q8IX29 292 aaPredicted RBP13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 CLEC4DQ8WXI8 215 aa13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 LRRC2Q9BYS8 371 aa13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 C22orf23Q9BZE7 217 aa13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 ABHD16BQ9H3Z7 469 aa13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 UPF2Q9HAU5 1272 aaKnown RBP13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 GPHNQ9NQX3 736 aaPredicted RBP13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 RBM27Q9P2N5 1060 aaKnown RBP13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 ATP11BQ9Y2G3 1177 aa13.84□□□□□ -0.19
TRERNA1-201ENST00000431460 CEP290O15078 2479 aa13.83□□□□□ -0.2
TRERNA1-201ENST00000431460 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.83□□□□□ -0.2
TRERNA1-201ENST00000431460 MYADML2A6NDP7 307 aa13.83□□□□□ -0.2
TRERNA1-201ENST00000431460 CCDC69A6NI79 296 aa13.83□□□□□ -0.2
TRERNA1-201ENST00000431460 DDAH1O94760 285 aa13.83□□□□□ -0.2
TRERNA1-201ENST00000431460 PTGS1P23219 599 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms