RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 FKBP1CQ5VVH2 108 aa18.9■□□□□ 0.62
USHBP1-203ENST00000431146 SARM1Q6SZW1 724 aa18.9■□□□□ 0.62
USHBP1-203ENST00000431146 CUL5Q93034 780 aa18.9■□□□□ 0.62
USHBP1-203ENST00000431146 GMCL1Q96IK5 515 aa18.9■□□□□ 0.62
USHBP1-203ENST00000431146 PLIN2Q99541 437 aa18.9■□□□□ 0.62
USHBP1-203ENST00000431146 PCDHA1Q9Y5I3 950 aa18.9■□□□□ 0.62
USHBP1-203ENST00000431146 TDP2O95551 362 aa18.89■□□□□ 0.62
USHBP1-203ENST00000431146 BMP3P12645 472 aa18.89■□□□□ 0.62
USHBP1-203ENST00000431146 GMPSP49915 693 aaPredicted RBP18.89■□□□□ 0.62
USHBP1-203ENST00000431146 PPP1R18Q6NYC8 613 aa18.89■□□□□ 0.62
USHBP1-203ENST00000431146 SH3RF1Q7Z6J0 888 aa18.89■□□□□ 0.62
USHBP1-203ENST00000431146 FAM83AQ86UY5 434 aa18.89■□□□□ 0.62
USHBP1-203ENST00000431146 IQUBQ8NA54 791 aa18.89■□□□□ 0.62
USHBP1-203ENST00000431146 UPF1Q92900 1129 aaKnown RBP eCLIP18.89■□□□□ 0.62
USHBP1-203ENST00000431146 BLZF1Q9H2G9 400 aa18.89■□□□□ 0.62
USHBP1-203ENST00000431146 PSTPIP2Q9H939 334 aa18.89■□□□□ 0.62
USHBP1-203ENST00000431146 PGAP2Q9UHJ9 254 aa18.89■□□□□ 0.62
USHBP1-203ENST00000431146 USP17L15C9J2P7 530 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 USP17L13C9JLJ4 530 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 USP17L11C9JVI0 530 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 USP17L18D6R9N7 530 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 USP17L22D6RA61 530 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 USP17L17D6RBQ6 530 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 USP17L19D6RCP7 530 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 USP17L20D6RJB6 530 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 OR52Z1P0C646 297 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 LMOD1P29536 600 aaPredicted RBP18.89■□□□□ 0.61
USHBP1-203ENST00000431146 CLCN1P35523 988 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 USP17L24Q0WX57 530 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 MORC3Q14149 939 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 RASA3Q14644 834 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 USH1GQ495M9 461 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 TBC1D10BQ4KMP7 808 aaPredicted RBP18.89■□□□□ 0.61
USHBP1-203ENST00000431146 PDXDC2PQ6P474 469 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 USP17L6PQ6QN14 398 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 MICALL2Q8IY33 904 aa18.89■□□□□ 0.61
USHBP1-203ENST00000431146 SLC37A4O43826 429 aa18.88■□□□□ 0.61
USHBP1-203ENST00000431146 CLK2P49760 499 aaKnown RBP18.88■□□□□ 0.61
USHBP1-203ENST00000431146 RASSF8Q8NHQ8 419 aa18.88■□□□□ 0.61
USHBP1-203ENST00000431146 SPATA20Q8TB22 786 aa18.88■□□□□ 0.61
USHBP1-203ENST00000431146 MTRQ99707 1265 aa18.88■□□□□ 0.61
USHBP1-203ENST00000431146 ARHGEF10LQ9HCE6 1279 aa18.88■□□□□ 0.61
USHBP1-203ENST00000431146 LAD1O00515 517 aa18.88■□□□□ 0.61
USHBP1-203ENST00000431146 PTGS1P23219 599 aa18.88■□□□□ 0.61
USHBP1-203ENST00000431146 TXLNAP40222 546 aa18.88■□□□□ 0.61
USHBP1-203ENST00000431146 DPYDQ12882 1025 aa18.88■□□□□ 0.61
USHBP1-203ENST00000431146 SYDE2Q5VT97 1194 aa18.88■□□□□ 0.61
USHBP1-203ENST00000431146 GLIS2Q9BZE0 524 aaPredicted RBP18.88■□□□□ 0.61
USHBP1-203ENST00000431146 HSD3B7Q9H2F3 369 aa18.88■□□□□ 0.61
USHBP1-203ENST00000431146 SMTNL1A8MU46 457 aa18.87■□□□□ 0.61
USHBP1-203ENST00000431146 RRP9O43818 475 aaKnown RBP18.87■□□□□ 0.61
USHBP1-203ENST00000431146 ATP1A3P13637 1013 aa18.87■□□□□ 0.61
USHBP1-203ENST00000431146 PRPHP41219 470 aa18.87■□□□□ 0.61
USHBP1-203ENST00000431146 TECP42680 631 aa18.87■□□□□ 0.61
USHBP1-203ENST00000431146 MRPL12P52815 198 aaKnown RBP18.87■□□□□ 0.61
USHBP1-203ENST00000431146 ZNF280AP59817 542 aaPredicted RBP18.87■□□□□ 0.61
USHBP1-203ENST00000431146 DISC1Q9NRI5 854 aa18.87■□□□□ 0.61
USHBP1-203ENST00000431146 SMC2O95347 1197 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 CAP2P40123 477 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 UBA7P41226 1012 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 STAT6P42226 847 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 TXKP42681 527 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 MYL5Q02045 173 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 HSP90AA4PQ58FG1 418 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 FAM83BQ5T0W9 1011 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 CCDC186Q7Z3E2 898 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 CCDC34Q96HJ3 373 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 KCNF1Q9H3M0 494 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 CNOT7Q9UIV1 285 aaKnown RBP18.86■□□□□ 0.61
USHBP1-203ENST00000431146 TMX2Q9Y320 296 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 IKBKBO14920 756 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 TBC1D12O60347 775 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 FMR1Q06787 632 aaKnown RBP eCLIP18.86■□□□□ 0.61
USHBP1-203ENST00000431146 CUL4BQ13620 913 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 SAMD1Q6SPF0 538 aaPredicted RBP18.86■□□□□ 0.61
USHBP1-203ENST00000431146 TRMT44Q8IYL2 757 aaKnown RBP18.86■□□□□ 0.61
USHBP1-203ENST00000431146 SMYD4Q8IYR2 804 aaPredicted RBP18.86■□□□□ 0.61
USHBP1-203ENST00000431146 LRRC15Q8TF66 581 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 ZNF541Q9H0D2 1346 aa18.86■□□□□ 0.61
USHBP1-203ENST00000431146 GOLGA6L6A8MZA4 724 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 FZD9O00144 591 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 CCDC144BQ3MJ40 725 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 NAALADL2Q58DX5 795 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.85■□□□□ 0.61
USHBP1-203ENST00000431146 GJA10Q969M2 543 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 UIMC1Q96RL1 719 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 LTBP3Q9NS15 1303 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 ATAD5Q96QE3 1844 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 RPS12P25398 132 aaKnown RBP18.85■□□□□ 0.61
USHBP1-203ENST00000431146 CALCRLQ16602 461 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 RRAGBQ5VZM2 374 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 FBXO11Q86XK2 927 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 MRFAP1L1Q96HT8 127 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 AMNQ9BXJ7 453 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 GOPCQ9HD26 462 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 IFNKQ9P0W0 207 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 PRR12Q9ULL5 1215 aa18.85■□□□□ 0.61
USHBP1-203ENST00000431146 STAT2P52630 851 aa18.84■□□□□ 0.61
USHBP1-203ENST00000431146 TPM4P67936 248 aa18.84■□□□□ 0.61
USHBP1-203ENST00000431146 TRIML1Q8N9V2 468 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms