RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 KRT83P78385 493 aa4.5□□□□□ -1.69
CLHC1-201ENST00000401408 XRRA1Q6P2D8 792 aa4.5□□□□□ -1.69
CLHC1-201ENST00000401408 PLBD1Q6P4A8 553 aa4.5□□□□□ -1.69
CLHC1-201ENST00000401408 CCBE1Q6UXH8 406 aaPredicted RBP4.5□□□□□ -1.69
CLHC1-201ENST00000401408 CYP26C1Q6V0L0 522 aa4.5□□□□□ -1.69
CLHC1-201ENST00000401408 NKAPQ8N5F7 415 aaKnown RBP4.5□□□□□ -1.69
CLHC1-201ENST00000401408 IL17REQ8NFR9 667 aa4.5□□□□□ -1.69
CLHC1-201ENST00000401408 NKX2-3Q8TAU0 364 aa4.5□□□□□ -1.69
CLHC1-201ENST00000401408 MGARPQ8TDB4 240 aa4.5□□□□□ -1.69
CLHC1-201ENST00000401408 USP33Q8TEY7 942 aa4.5□□□□□ -1.69
CLHC1-201ENST00000401408 THAP3Q8WTV1 239 aaPredicted RBP4.5□□□□□ -1.69
CLHC1-201ENST00000401408 SYMPKQ92797 1274 aaKnown RBP4.5□□□□□ -1.69
CLHC1-201ENST00000401408 PURBQ96QR8 312 aaKnown RBP4.5□□□□□ -1.69
CLHC1-201ENST00000401408 NIF3L1Q9GZT8 377 aa4.5□□□□□ -1.69
CLHC1-201ENST00000401408 ALG13Q9NP73 1137 aaKnown RBP4.5□□□□□ -1.69
CLHC1-201ENST00000401408 NMRK2Q9NPI5 230 aa4.5□□□□□ -1.69
CLHC1-201ENST00000401408 PRKAG3Q9UGI9 489 aa4.5□□□□□ -1.69
CLHC1-201ENST00000401408 STAP2Q9UGK3 403 aa4.5□□□□□ -1.69
CLHC1-201ENST00000401408 ITM2BQ9Y287 266 aa4.5□□□□□ -1.69
CLHC1-201ENST00000401408 PTCH2Q9Y6C5 1203 aa4.5□□□□□ -1.69
CLHC1-201ENST00000401408 VIRMAQ69YN4 1812 aaKnown RBP4.5□□□□□ -1.69
CLHC1-201ENST00000401408 GCP02774 474 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 ATP1A2P50993 1020 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 ZNF280AP59817 542 aaPredicted RBP4.49□□□□□ -1.69
CLHC1-201ENST00000401408 KRT72Q14CN4 511 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 SEPT7Q16181 437 aaKnown RBP4.49□□□□□ -1.69
CLHC1-201ENST00000401408 INF2Q27J81 1249 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 EML3Q32P44 896 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 RNF180Q86T96 592 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 C7orf61Q8IZ16 206 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 STAG2Q8N3U4 1231 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 ZNF454Q8N9F8 522 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 NAXEQ8NCW5 288 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 OR8H1Q8NGG4 311 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 CPLX3Q8WVH0 158 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 POF1BQ8WVV4 589 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 CHMP4CQ96CF2 233 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 ZNF396Q96N95 335 aaPredicted RBP4.49□□□□□ -1.69
CLHC1-201ENST00000401408 SPON2Q9BUD6 331 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 RHOBTB2Q9BYZ6 727 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 RWDD1Q9H446 243 aaPredicted RBP4.49□□□□□ -1.69
CLHC1-201ENST00000401408 EPB41L4AQ9HCS5 686 aaPredicted RBP4.49□□□□□ -1.69
CLHC1-201ENST00000401408 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.49□□□□□ -1.69
CLHC1-201ENST00000401408 PHTF1Q9UMS5 762 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 CUL9Q8IWT3 2517 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 SFI1A8K8P3 1242 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 PLOD3O60568 738 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 RFPL1O75677 317 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 BBOX1O75936 387 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 TPM3P06753 285 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 NUDT7P0C024 238 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 PHKG2P15735 406 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 EIF4BP23588 611 aaKnown RBP4.49□□□□□ -1.69
CLHC1-201ENST00000401408 ATP6V1E1P36543 226 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 PSEN2P49810 448 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 TPD52P55327 224 aaPredicted RBP4.49□□□□□ -1.69
CLHC1-201ENST00000401408 MRPS35P82673 323 aaKnown RBP4.49□□□□□ -1.69
CLHC1-201ENST00000401408 CCDC15Q0P6D6 951 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 MRPL28Q13084 256 aaKnown RBP4.49□□□□□ -1.69
CLHC1-201ENST00000401408 TRIM14Q14142 442 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 TAF1CQ15572 869 aaPredicted RBP4.49□□□□□ -1.69
CLHC1-201ENST00000401408 AKAP4Q5JQC9 854 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 SLC27A3Q5K4L6 730 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 LDHAL6AQ6ZMR3 332 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 SRLQ86TD4 932 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 TRIM50Q86XT4 487 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 SYNPOQ8N3V7 929 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 FAM26EQ8N5C1 309 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 TEKT1Q969V4 418 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 ALKBH8Q96BT7 664 aaKnown RBP4.49□□□□□ -1.69
CLHC1-201ENST00000401408 TNIP3Q96KP6 325 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 UROC1Q96N76 676 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 FAM129BQ96TA1 746 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 HINFPQ9BQA5 517 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 NUCKS1Q9H1E3 243 aaKnown RBP4.49□□□□□ -1.69
CLHC1-201ENST00000401408 RPAP3Q9H6T3 665 aaPredicted RBP4.49□□□□□ -1.69
CLHC1-201ENST00000401408 FBRSQ9HAH7 460 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 NLRC4Q9NPP4 1024 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 STRIP2Q9ULQ0 834 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 LUC7L2Q9Y383 392 aaKnown RBP4.49□□□□□ -1.69
CLHC1-201ENST00000401408 UBR3Q6ZT12 1888 aa4.49□□□□□ -1.69
CLHC1-201ENST00000401408 MKI67P46013 3256 aaKnown RBP4.48□□□□□ -1.69
CLHC1-201ENST00000401408 SZT2Q5T011 3432 aa4.48□□□□□ -1.69
CLHC1-201ENST00000401408 ABHD14A-ACY1A0A1B0GW23 586 aa4.48□□□□□ -1.69
CLHC1-201ENST00000401408 RTCAO00442 366 aaKnown RBP4.48□□□□□ -1.69
CLHC1-201ENST00000401408 ELL2O00472 640 aaPredicted RBP4.48□□□□□ -1.69
CLHC1-201ENST00000401408 MTHFD1P11586 935 aaKnown RBP4.48□□□□□ -1.69
CLHC1-201ENST00000401408 HOXD10P28358 340 aa4.48□□□□□ -1.69
CLHC1-201ENST00000401408 GALNSP34059 522 aa4.48□□□□□ -1.69
CLHC1-201ENST00000401408 EIF2B5Q13144 721 aaKnown RBP4.48□□□□□ -1.69
CLHC1-201ENST00000401408 RASGRF1Q13972 1273 aa4.48□□□□□ -1.69
CLHC1-201ENST00000401408 MTERF2Q49AM1 385 aa4.48□□□□□ -1.69
CLHC1-201ENST00000401408 MEI1Q5TIA1 1274 aa4.48□□□□□ -1.69
CLHC1-201ENST00000401408 GALNT17Q6IS24 598 aa4.48□□□□□ -1.69
CLHC1-201ENST00000401408 IRGCQ6NXR0 463 aa4.48□□□□□ -1.69
CLHC1-201ENST00000401408 CTR9Q6PD62 1173 aa4.48□□□□□ -1.69
CLHC1-201ENST00000401408 PADI6Q6TGC4 694 aa4.48□□□□□ -1.69
CLHC1-201ENST00000401408 IGF2-ASQ6U949 168 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms