RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 MRFAP1Q9Y605 127 aa11.62□□□□□ -0.55
TUBB-208ENST00000396389 ECE1P42892 770 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 TNFAIP1Q13829 316 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 SPECC1Q5M775 1068 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 C16orf86Q6ZW13 317 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 ENAHQ8N8S7 591 aaPredicted RBP11.61□□□□□ -0.55
TUBB-208ENST00000396389 EFCC1Q9HA90 598 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 CWC15Q9P013 229 aaKnown RBP11.61□□□□□ -0.55
TUBB-208ENST00000396389 ERICH2A1L162 156 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 GOLGA8BA8MQT2 603 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 KIF28PB7ZC32 967 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 SPTLC2O15270 562 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 FOXN1O15353 648 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 MYCNP04198 464 aaPredicted RBP11.61□□□□□ -0.55
TUBB-208ENST00000396389 PFKFB1P16118 471 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 CDC27P30260 824 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 SBK1Q52WX2 424 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 AXDND1Q5T1B0 1012 aaPredicted RBP11.61□□□□□ -0.55
TUBB-208ENST00000396389 IQCA1Q86XH1 822 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 GPATCH11Q8N954 259 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 EXOC4Q96A65 974 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 KRT23Q9C075 422 aa11.61□□□□□ -0.55
TUBB-208ENST00000396389 ENTPD3O75355 529 aa11.6□□□□□ -0.55
TUBB-208ENST00000396389 PDIA3P30101 505 aaKnown RBP11.6□□□□□ -0.55
TUBB-208ENST00000396389 WTAPQ15007 396 aa11.6□□□□□ -0.55
TUBB-208ENST00000396389 TSGA10IPQ3SY00 556 aa11.6□□□□□ -0.55
TUBB-208ENST00000396389 IFIT1BQ5T764 474 aaKnown RBP11.6□□□□□ -0.55
TUBB-208ENST00000396389 MTMR14Q8NCE2 650 aa11.6□□□□□ -0.55
TUBB-208ENST00000396389 CPLX3Q8WVH0 158 aa11.6□□□□□ -0.55
TUBB-208ENST00000396389 L3MBTL3Q96JM7 780 aaPredicted RBP11.6□□□□□ -0.55
TUBB-208ENST00000396389 CLIC6Q96NY7 704 aa11.6□□□□□ -0.55
TUBB-208ENST00000396389 ZSCAN10Q96SZ4 725 aaPredicted RBP11.6□□□□□ -0.55
TUBB-208ENST00000396389 NUP88Q99567 741 aaPredicted RBP11.6□□□□□ -0.55
TUBB-208ENST00000396389 SRRTQ9BXP5 876 aaKnown RBP11.6□□□□□ -0.55
TUBB-208ENST00000396389 DHX36Q9H2U1 1008 aaKnown RBP11.6□□□□□ -0.55
TUBB-208ENST00000396389 RABEP2Q9H5N1 569 aa11.6□□□□□ -0.55
TUBB-208ENST00000396389 MRPL44Q9H9J2 332 aaKnown RBP11.6□□□□□ -0.55
TUBB-208ENST00000396389 ANGEL1Q9UNK9 670 aaKnown RBP11.6□□□□□ -0.55
TUBB-208ENST00000396389 ABL1P00519 1130 aa11.6□□□□□ -0.55
TUBB-208ENST00000396389 ICE2Q659A1 982 aa11.6□□□□□ -0.55
TUBB-208ENST00000396389 LEKR1Q6ZMV7 388 aa11.6□□□□□ -0.55
TUBB-208ENST00000396389 CLMNQ96JQ2 1002 aa11.6□□□□□ -0.55
TUBB-208ENST00000396389 AIFM3Q96NN9 605 aa11.6□□□□□ -0.55
TUBB-208ENST00000396389 BAG1Q99933 345 aaPredicted RBP11.6□□□□□ -0.55
TUBB-208ENST00000396389 ABCB6Q9NP58 842 aa11.6□□□□□ -0.55
TUBB-208ENST00000396389 TIAM2Q8IVF5 1701 aa11.6□□□□□ -0.55
TUBB-208ENST00000396389 TRIM75PA6NK02 468 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 EIF3CLB5ME19 914 aaKnown RBP11.59□□□□□ -0.55
TUBB-208ENST00000396389 YY1P25490 414 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 EXOSC10Q01780 885 aaKnown RBP11.59□□□□□ -0.55
TUBB-208ENST00000396389 GABPAQ06546 454 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 ABCB5Q2M3G0 1257 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 FOXP4Q8IVH2 680 aaPredicted RBP11.59□□□□□ -0.55
TUBB-208ENST00000396389 VSTM4Q8IW00 320 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 TRMT44Q8IYL2 757 aaKnown RBP11.59□□□□□ -0.55
TUBB-208ENST00000396389 ACER1Q8TDN7 264 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 CCDC102AQ96A19 550 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 KIFC2Q96AC6 838 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 EIF3CQ99613 913 aaKnown RBP11.59□□□□□ -0.55
TUBB-208ENST00000396389 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.59□□□□□ -0.55
TUBB-208ENST00000396389 RTEL1Q9NZ71 1219 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.59□□□□□ -0.55
TUBB-208ENST00000396389 FRMPD2Q68DX3 1309 aaPredicted RBP11.59□□□□□ -0.55
TUBB-208ENST00000396389 TXLNAP40222 546 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 IGDCC4Q8TDY8 1250 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 CDCA5Q96FF9 252 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 GDAP1L1Q96MZ0 367 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 CNNM2Q9H8M5 875 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 ANKZF1Q9H8Y5 726 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 VAT1LQ9HCJ6 419 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 ANAPC4Q9UJX5 808 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 JRKLQ9Y4A0 524 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 SLC12A7Q9Y666 1083 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 ZSCAN12O43309 604 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 ATP8B1O43520 1251 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 USP50Q70EL3 339 aaPredicted RBP11.59□□□□□ -0.55
TUBB-208ENST00000396389 APOBEC3FQ8IUX4 373 aaKnown RBP11.59□□□□□ -0.55
TUBB-208ENST00000396389 GOLGA1Q92805 767 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 PHKBQ93100 1093 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 HINFPQ9BQA5 517 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 LY9Q9HBG7 655 aa11.59□□□□□ -0.55
TUBB-208ENST00000396389 SOWAHDA6NJG2 315 aa11.58□□□□□ -0.56
TUBB-208ENST00000396389 TPM1P09493 284 aa11.58□□□□□ -0.56
TUBB-208ENST00000396389 PSEN1P49768 467 aa11.58□□□□□ -0.56
TUBB-208ENST00000396389 SNAP25P60880 206 aa11.58□□□□□ -0.56
TUBB-208ENST00000396389 BEND6Q5SZJ8 279 aaPredicted RBP11.58□□□□□ -0.56
TUBB-208ENST00000396389 USP17L2Q6R6M4 530 aa11.58□□□□□ -0.56
TUBB-208ENST00000396389 RABGGTAQ92696 567 aa11.58□□□□□ -0.56
TUBB-208ENST00000396389 BAZ2BQ9UIF8 2168 aaKnown RBP11.58□□□□□ -0.56
TUBB-208ENST00000396389 SH2B2O14492 632 aaPredicted RBP11.58□□□□□ -0.56
TUBB-208ENST00000396389 MAP2K7O14733 419 aa11.58□□□□□ -0.56
TUBB-208ENST00000396389 EEF2P13639 858 aaKnown RBP11.58□□□□□ -0.56
TUBB-208ENST00000396389 KCNJ6P48051 423 aa11.58□□□□□ -0.56
TUBB-208ENST00000396389 CHMP4BP1P59074 171 aa11.58□□□□□ -0.56
TUBB-208ENST00000396389 FAM83AQ86UY5 434 aa11.58□□□□□ -0.56
TUBB-208ENST00000396389 POLR2AP24928 1970 aaKnown RBP11.58□□□□□ -0.56
TUBB-208ENST00000396389 CELF2O95319 508 aaKnown RBP11.57□□□□□ -0.56
TUBB-208ENST00000396389 TAL1P17542 331 aaPredicted RBP11.57□□□□□ -0.56
TUBB-208ENST00000396389 BMP6P22004 513 aa11.57□□□□□ -0.56
TUBB-208ENST00000396389 SLC16A2P36021 539 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms