RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 SOWAHBA6NEL2 793 aa13.8□□□□□ -0.2
RFC4-202ENST00000392481 KLRF2D3W0D1 207 aa13.8□□□□□ -0.2
RFC4-202ENST00000392481 NFIBO00712 420 aa13.8□□□□□ -0.2
RFC4-202ENST00000392481 PRC1O43663 620 aa13.8□□□□□ -0.2
RFC4-202ENST00000392481 DHX16O60231 1041 aaKnown RBP13.8□□□□□ -0.2
RFC4-202ENST00000392481 COL6A1P12109 1028 aa13.8□□□□□ -0.2
RFC4-202ENST00000392481 TROAPQ12815 778 aa13.8□□□□□ -0.2
RFC4-202ENST00000392481 GRM4Q14833 912 aa13.8□□□□□ -0.2
RFC4-202ENST00000392481 TSGA10IPQ3SY00 556 aa13.8□□□□□ -0.2
RFC4-202ENST00000392481 ARMCX2Q7L311 632 aa13.8□□□□□ -0.2
RFC4-202ENST00000392481 CATIPQ7Z7H3 387 aa13.8□□□□□ -0.2
RFC4-202ENST00000392481 TMTC2Q8N394 836 aa13.8□□□□□ -0.2
RFC4-202ENST00000392481 TMEM87BQ96K49 555 aa13.8□□□□□ -0.2
RFC4-202ENST00000392481 ABHD16BQ9H3Z7 469 aa13.8□□□□□ -0.2
RFC4-202ENST00000392481 JMJD4Q9H9V9 463 aa13.8□□□□□ -0.2
RFC4-202ENST00000392481 MYH6P13533 1939 aa13.79□□□□□ -0.2
RFC4-202ENST00000392481 BAZ2BQ9UIF8 2168 aaKnown RBP13.79□□□□□ -0.2
RFC4-202ENST00000392481 ASB14A6NK59 587 aa13.79□□□□□ -0.2
RFC4-202ENST00000392481 DNM1LO00429 736 aa13.79□□□□□ -0.2
RFC4-202ENST00000392481 RARBP10826 455 aa13.79□□□□□ -0.2
RFC4-202ENST00000392481 AKR1A1P14550 325 aa13.79□□□□□ -0.2
RFC4-202ENST00000392481 ACVR2BQ13705 512 aa13.79□□□□□ -0.2
RFC4-202ENST00000392481 BAATQ14032 418 aaPredicted RBP13.79□□□□□ -0.2
RFC4-202ENST00000392481 ANO1Q5XXA6 986 aa13.79□□□□□ -0.2
RFC4-202ENST00000392481 CCDC144CPQ8IYA2 1237 aa13.79□□□□□ -0.2
RFC4-202ENST00000392481 RGS22Q8NE09 1264 aa13.79□□□□□ -0.2
RFC4-202ENST00000392481 MAP3K14Q99558 947 aa13.79□□□□□ -0.2
RFC4-202ENST00000392481 MAF1Q9H063 256 aa13.79□□□□□ -0.2
RFC4-202ENST00000392481 LY9Q9HBG7 655 aa13.79□□□□□ -0.2
RFC4-202ENST00000392481 VAT1LQ9HCJ6 419 aa13.79□□□□□ -0.2
RFC4-202ENST00000392481 NR2E3Q9Y5X4 410 aa13.79□□□□□ -0.2
RFC4-202ENST00000392481 ABCB11O95342 1321 aa13.78□□□□□ -0.2
RFC4-202ENST00000392481 LOC102724159A0A0B4J2E5 919 aa13.78□□□□□ -0.2
RFC4-202ENST00000392481 PTPDC1A2A3K4 754 aa13.78□□□□□ -0.2
RFC4-202ENST00000392481 LIFRP42702 1097 aa13.78□□□□□ -0.2
RFC4-202ENST00000392481 PWP2Q15269 919 aaKnown RBP13.78□□□□□ -0.2
RFC4-202ENST00000392481 QRICH1Q2TAL8 776 aa13.78□□□□□ -0.2
RFC4-202ENST00000392481 USH1GQ495M9 461 aa13.78□□□□□ -0.2
RFC4-202ENST00000392481 RNF207Q6ZRF8 634 aa13.78□□□□□ -0.2
RFC4-202ENST00000392481 FBXO11Q86XK2 927 aa13.78□□□□□ -0.2
RFC4-202ENST00000392481 MTMR8Q96EF0 704 aa13.78□□□□□ -0.2
RFC4-202ENST00000392481 GPHNQ9NQX3 736 aaPredicted RBP13.78□□□□□ -0.2
RFC4-202ENST00000392481 ADD3Q9UEY8 706 aaKnown RBP13.78□□□□□ -0.2
RFC4-202ENST00000392481 ZHX1Q9UKY1 873 aaPredicted RBP13.78□□□□□ -0.2
RFC4-202ENST00000392481 FAM184BQ9ULE4 1060 aa13.78□□□□□ -0.2
RFC4-202ENST00000392481 ASTN1O14525 1302 aa13.78□□□□□ -0.2
RFC4-202ENST00000392481 SH2B2O14492 632 aaPredicted RBP13.77□□□□□ -0.21
RFC4-202ENST00000392481 EVI5O60447 810 aa13.77□□□□□ -0.21
RFC4-202ENST00000392481 DDAH1O94760 285 aa13.77□□□□□ -0.21
RFC4-202ENST00000392481 REC8O95072 547 aa13.77□□□□□ -0.21
RFC4-202ENST00000392481 RPS6P62753 249 aaKnown RBP13.77□□□□□ -0.21
RFC4-202ENST00000392481 COL9A3Q14050 684 aaPredicted RBP13.77□□□□□ -0.21
RFC4-202ENST00000392481 KRT32Q14532 448 aa13.77□□□□□ -0.21
RFC4-202ENST00000392481 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
RFC4-202ENST00000392481 ZNF654Q8IZM8 581 aa13.77□□□□□ -0.21
RFC4-202ENST00000392481 MORC4Q8TE76 937 aa13.77□□□□□ -0.21
RFC4-202ENST00000392481 NEK1Q96PY6 1258 aa13.77□□□□□ -0.21
RFC4-202ENST00000392481 KATNBL1Q9H079 304 aa13.77□□□□□ -0.21
RFC4-202ENST00000392481 RIOX1Q9H6W3 641 aa13.77□□□□□ -0.21
RFC4-202ENST00000392481 XPNPEP3Q9NQH7 507 aa13.77□□□□□ -0.21
RFC4-202ENST00000392481 LCTP09848 1927 aa13.77□□□□□ -0.21
RFC4-202ENST00000392481 KBTBD13C9JR72 458 aa13.76□□□□□ -0.21
RFC4-202ENST00000392481 H0YGN5 161 aa13.76□□□□□ -0.21
RFC4-202ENST00000392481 ZBTB5O15062 677 aa13.76□□□□□ -0.21
RFC4-202ENST00000392481 DUSP11O75319 330 aaKnown RBP13.76□□□□□ -0.21
RFC4-202ENST00000392481 CALML3P27482 149 aa13.76□□□□□ -0.21
RFC4-202ENST00000392481 KIF5BP33176 963 aa13.76□□□□□ -0.21
RFC4-202ENST00000392481 LRRC41Q15345 812 aa13.76□□□□□ -0.21
RFC4-202ENST00000392481 CCDC144BQ3MJ40 725 aa13.76□□□□□ -0.21
RFC4-202ENST00000392481 GJC2Q5T442 439 aaPredicted RBP13.76□□□□□ -0.21
RFC4-202ENST00000392481 SLC30A10Q6XR72 485 aa13.76□□□□□ -0.21
RFC4-202ENST00000392481 NFXL1Q6ZNB6 911 aa13.76□□□□□ -0.21
RFC4-202ENST00000392481 NUP133Q8WUM0 1156 aa13.76□□□□□ -0.21
RFC4-202ENST00000392481 KCNB2Q92953 911 aa13.76□□□□□ -0.21
RFC4-202ENST00000392481 PURBQ96QR8 312 aaKnown RBP13.76□□□□□ -0.21
RFC4-202ENST00000392481 AMNQ9BXJ7 453 aa13.76□□□□□ -0.21
RFC4-202ENST00000392481 MRPL11Q9Y3B7 192 aaKnown RBP13.76□□□□□ -0.21
RFC4-202ENST00000392481 ALPK3Q96L96 1907 aa13.76□□□□□ -0.21
RFC4-202ENST00000392481 RANBP2P49792 3224 aaKnown RBP13.76□□□□□ -0.21
RFC4-202ENST00000392481 CCDC69A6NI79 296 aa13.75□□□□□ -0.21
RFC4-202ENST00000392481 PGK1P00558 417 aa13.75□□□□□ -0.21
RFC4-202ENST00000392481 ALDH5A1P51649 535 aaPredicted RBP13.75□□□□□ -0.21
RFC4-202ENST00000392481 TRAF1Q13077 416 aa13.75□□□□□ -0.21
RFC4-202ENST00000392481 SLC35G1Q2M3R5 365 aa13.75□□□□□ -0.21
RFC4-202ENST00000392481 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
RFC4-202ENST00000392481 DHX32Q7L7V1 743 aaKnown RBP13.75□□□□□ -0.21
RFC4-202ENST00000392481 RNF180Q86T96 592 aa13.75□□□□□ -0.21
RFC4-202ENST00000392481 SGMS1Q86VZ5 419 aa13.75□□□□□ -0.21
RFC4-202ENST00000392481 MCF2L2Q86YR7 1114 aa13.75□□□□□ -0.21
RFC4-202ENST00000392481 DNERQ8NFT8 737 aa13.75□□□□□ -0.21
RFC4-202ENST00000392481 CTCFLQ8NI51 663 aaPredicted RBP13.75□□□□□ -0.21
RFC4-202ENST00000392481 SENP6Q9GZR1 1112 aaPredicted RBP13.75□□□□□ -0.21
RFC4-202ENST00000392481 TRIOBPQ9H2D6 2365 aa13.75□□□□□ -0.21
RFC4-202ENST00000392481 EPB41L2O43491 1005 aaKnown RBP13.74□□□□□ -0.21
RFC4-202ENST00000392481 CYTH3O43739 400 aa13.74□□□□□ -0.21
RFC4-202ENST00000392481 MYCNP04198 464 aaPredicted RBP13.74□□□□□ -0.21
RFC4-202ENST00000392481 HMGB1P09429 215 aaKnown RBP13.74□□□□□ -0.21
RFC4-202ENST00000392481 CALM1P0DP23 149 aa13.74□□□□□ -0.21
RFC4-202ENST00000392481 CALM2P0DP24 149 aa13.74□□□□□ -0.21
RFC4-202ENST00000392481 CALM3P0DP25 149 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms