RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 HABP4Q5JVS0 413 aaKnown RBP16.29■□□□□ 0.2
CCDC57-204ENST00000392345 GPATCH4Q5T3I0 446 aaKnown RBP16.29■□□□□ 0.2
CCDC57-204ENST00000392345 SLC30A10Q6XR72 485 aa16.29■□□□□ 0.2
CCDC57-204ENST00000392345 STAG2Q8N3U4 1231 aa16.29■□□□□ 0.2
CCDC57-204ENST00000392345 CCDC136Q96JN2 1154 aa16.29■□□□□ 0.2
CCDC57-204ENST00000392345 XPNPEP3Q9NQH7 507 aa16.29■□□□□ 0.2
CCDC57-204ENST00000392345 LCTP09848 1927 aa16.29■□□□□ 0.2
CCDC57-204ENST00000392345 PTGS1P23219 599 aa16.28■□□□□ 0.2
CCDC57-204ENST00000392345 TRDNQ13061 729 aa16.28■□□□□ 0.2
CCDC57-204ENST00000392345 BAATQ14032 418 aaPredicted RBP16.28■□□□□ 0.2
CCDC57-204ENST00000392345 CDC37Q16543 378 aaPredicted RBP16.28■□□□□ 0.2
CCDC57-204ENST00000392345 SLC35G1Q2M3R5 365 aa16.28■□□□□ 0.2
CCDC57-204ENST00000392345 USH1GQ495M9 461 aa16.28■□□□□ 0.2
CCDC57-204ENST00000392345 ASPRV1Q53RT3 343 aa16.28■□□□□ 0.2
CCDC57-204ENST00000392345 MB21D2Q8IYB1 491 aaPredicted RBP16.28■□□□□ 0.2
CCDC57-204ENST00000392345 PRO3102Q9H379 93 aa16.28■□□□□ 0.2
CCDC57-204ENST00000392345 GPHNQ9NQX3 736 aaPredicted RBP16.28■□□□□ 0.2
CCDC57-204ENST00000392345 WDR19Q8NEZ3 1342 aa16.27■□□□□ 0.2
CCDC57-204ENST00000392345 SYNRGQ9UMZ2 1314 aa16.27■□□□□ 0.2
CCDC57-204ENST00000392345 MYADML2A6NDP7 307 aa16.27■□□□□ 0.2
CCDC57-204ENST00000392345 KBTBD13C9JR72 458 aa16.27■□□□□ 0.2
CCDC57-204ENST00000392345 ADAMTS4O75173 837 aa16.27■□□□□ 0.2
CCDC57-204ENST00000392345 PARP1P09874 1014 aaKnown RBP16.27■□□□□ 0.2
CCDC57-204ENST00000392345 ADCYAP1R1P41586 468 aa16.27■□□□□ 0.2
CCDC57-204ENST00000392345 RALYLQ86SE5 291 aaKnown RBP16.27■□□□□ 0.2
CCDC57-204ENST00000392345 ADGRF4Q8IZF3 695 aa16.27■□□□□ 0.2
CCDC57-204ENST00000392345 ARRDC4Q8NCT1 418 aa16.27■□□□□ 0.2
CCDC57-204ENST00000392345 FERMT2Q96AC1 680 aa16.27■□□□□ 0.2
CCDC57-204ENST00000392345 RBM27Q9P2N5 1060 aaKnown RBP16.27■□□□□ 0.2
CCDC57-204ENST00000392345 SMCHD1A6NHR9 2005 aa16.27■□□□□ 0.2
CCDC57-204ENST00000392345 SZT2Q5T011 3432 aa16.26■□□□□ 0.19
CCDC57-204ENST00000392345 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.26■□□□□ 0.19
CCDC57-204ENST00000392345 PTPDC1A2A3K4 754 aa16.26■□□□□ 0.19
CCDC57-204ENST00000392345 IFIT3O14879 490 aaKnown RBP16.26■□□□□ 0.19
CCDC57-204ENST00000392345 SLC27A2O14975 620 aa16.26■□□□□ 0.19
CCDC57-204ENST00000392345 CCDC144BQ3MJ40 725 aa16.26■□□□□ 0.19
CCDC57-204ENST00000392345 FBXO16Q8IX29 292 aaPredicted RBP16.26■□□□□ 0.19
CCDC57-204ENST00000392345 NCOA7Q8NI08 942 aa16.26■□□□□ 0.19
CCDC57-204ENST00000392345 ABHD16BQ9H3Z7 469 aa16.26■□□□□ 0.19
CCDC57-204ENST00000392345 JMJD4Q9H9V9 463 aa16.26■□□□□ 0.19
CCDC57-204ENST00000392345 ANO2Q9NQ90 1003 aa16.26■□□□□ 0.19
CCDC57-204ENST00000392345 MAD2L2Q9UI95 211 aa16.26■□□□□ 0.19
CCDC57-204ENST00000392345 FAM184BQ9ULE4 1060 aa16.26■□□□□ 0.19
CCDC57-204ENST00000392345 CALML3P27482 149 aa16.25■□□□□ 0.19
CCDC57-204ENST00000392345 RTP1P59025 263 aa16.25■□□□□ 0.19
CCDC57-204ENST00000392345 QRICH1Q2TAL8 776 aa16.25■□□□□ 0.19
CCDC57-204ENST00000392345 TMEM63BQ5T3F8 832 aa16.25■□□□□ 0.19
CCDC57-204ENST00000392345 CREB3L3Q68CJ9 461 aa16.25■□□□□ 0.19
CCDC57-204ENST00000392345 KIAA1211Q6ZU35 1233 aa16.25■□□□□ 0.19
CCDC57-204ENST00000392345 EEPD1Q7L9B9 569 aa16.25■□□□□ 0.19
CCDC57-204ENST00000392345 VAT1LQ9HCJ6 419 aa16.25■□□□□ 0.19
CCDC57-204ENST00000392345 PDGFCQ9NRA1 345 aa16.25■□□□□ 0.19
CCDC57-204ENST00000392345 MCM3APO60318 1980 aa16.25■□□□□ 0.19
CCDC57-204ENST00000392345 LAMA2P24043 3122 aaKnown RBP16.25■□□□□ 0.19
CCDC57-204ENST00000392345 DHX16O60231 1041 aaKnown RBP16.24■□□□□ 0.19
CCDC57-204ENST00000392345 PPP1R11O60927 126 aaPredicted RBP16.24■□□□□ 0.19
CCDC57-204ENST00000392345 ALDH5A1P51649 535 aaPredicted RBP16.24■□□□□ 0.19
CCDC57-204ENST00000392345 RPS6P62753 249 aaKnown RBP16.24■□□□□ 0.19
CCDC57-204ENST00000392345 GRM4Q14833 912 aa16.24■□□□□ 0.19
CCDC57-204ENST00000392345 WTAPQ15007 396 aa16.24■□□□□ 0.19
CCDC57-204ENST00000392345 NECTIN1Q15223 517 aa16.24■□□□□ 0.19
CCDC57-204ENST00000392345 TMEM67Q5HYA8 995 aa16.24■□□□□ 0.19
CCDC57-204ENST00000392345 KLHDC9Q8NEP7 349 aa16.24■□□□□ 0.19
CCDC57-204ENST00000392345 IGDCC4Q8TDY8 1250 aa16.24■□□□□ 0.19
CCDC57-204ENST00000392345 TBC1D5Q92609 795 aa16.24■□□□□ 0.19
CCDC57-204ENST00000392345 PHF24Q9UPV7 400 aa16.24■□□□□ 0.19
CCDC57-204ENST00000392345 A0A1W2PQ45 241 aaPredicted RBP16.23■□□□□ 0.19
CCDC57-204ENST00000392345 A0A1W2PQY0 241 aa16.23■□□□□ 0.19
CCDC57-204ENST00000392345 PALM3A6NDB9 673 aaPredicted RBP16.23■□□□□ 0.19
CCDC57-204ENST00000392345 ASB14A6NK59 587 aa16.23■□□□□ 0.19
CCDC57-204ENST00000392345 DUSP11O75319 330 aaKnown RBP16.23■□□□□ 0.19
CCDC57-204ENST00000392345 CDC45O75419 566 aa16.23■□□□□ 0.19
CCDC57-204ENST00000392345 MAGEA10P43363 369 aaPredicted RBP16.23■□□□□ 0.19
CCDC57-204ENST00000392345 TRIM60Q495X7 471 aa16.23■□□□□ 0.19
CCDC57-204ENST00000392345 SLC39A5Q6ZMH5 540 aa16.23■□□□□ 0.19
CCDC57-204ENST00000392345 RNF207Q6ZRF8 634 aa16.23■□□□□ 0.19
CCDC57-204ENST00000392345 RNF180Q86T96 592 aa16.23■□□□□ 0.19
CCDC57-204ENST00000392345 MORC4Q8TE76 937 aa16.23■□□□□ 0.19
CCDC57-204ENST00000392345 MYL10Q9BUA6 226 aa16.23■□□□□ 0.19
CCDC57-204ENST00000392345 LY9Q9HBG7 655 aa16.23■□□□□ 0.19
CCDC57-204ENST00000392345 ATP11BQ9Y2G3 1177 aa16.23■□□□□ 0.19
CCDC57-204ENST00000392345 KLRF2D3W0D1 207 aa16.22■□□□□ 0.19
CCDC57-204ENST00000392345 CTAGE5O15320 804 aa16.22■□□□□ 0.19
CCDC57-204ENST00000392345 PRC1O43663 620 aa16.22■□□□□ 0.19
CCDC57-204ENST00000392345 SLC34A2O95436 690 aa16.22■□□□□ 0.19
CCDC57-204ENST00000392345 FXR1P51114 621 aaKnown RBP eCLIP16.22■□□□□ 0.19
CCDC57-204ENST00000392345 TROAPQ12815 778 aa16.22■□□□□ 0.19
CCDC57-204ENST00000392345 SNX17Q15036 470 aa16.22■□□□□ 0.19
CCDC57-204ENST00000392345 CCSAPQ6IQ19 270 aaPredicted RBP16.22■□□□□ 0.19
CCDC57-204ENST00000392345 TAPT1Q6NXT6 567 aa16.22■□□□□ 0.19
CCDC57-204ENST00000392345 GDF15Q99988 308 aa16.22■□□□□ 0.19
CCDC57-204ENST00000392345 UPF3AQ9H1J1 476 aaKnown RBP16.22■□□□□ 0.19
CCDC57-204ENST00000392345 COL20A1Q9P218 1284 aa16.22■□□□□ 0.19
CCDC57-204ENST00000392345 TRIOBPQ9H2D6 2365 aa16.22■□□□□ 0.19
CCDC57-204ENST00000392345 ERICH2A1L162 156 aa16.21■□□□□ 0.19
CCDC57-204ENST00000392345 OPLAHO14841 1288 aa16.21■□□□□ 0.19
CCDC57-204ENST00000392345 CYTH3O43739 400 aa16.21■□□□□ 0.19
CCDC57-204ENST00000392345 C6orf222P0C671 652 aaPredicted RBP16.21■□□□□ 0.19
CCDC57-204ENST00000392345 SMPD1P17405 629 aa16.21■□□□□ 0.19
CCDC57-204ENST00000392345 TNFAIP2Q03169 654 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms