RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 SMCO2A6NFE2 343 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 BRD1O95696 1058 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 STAT3P40763 770 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 GUCY1B3Q02153 619 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 GRM1Q13255 1194 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 SAFBQ15424 915 aaKnown RBP eCLIP18.21■□□□□ 0.51
TMEM53-204ENST00000372243 NPY5RQ15761 445 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 ZIC5Q96T25 663 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 BTBD7Q9P203 1132 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 PCDHA4Q9UN74 947 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 CNMDO75829 334 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 ALDH1A1P00352 501 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 ZSCAN22P10073 491 aaPredicted RBP18.21■□□□□ 0.51
TMEM53-204ENST00000372243 FOSBP53539 338 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 PKP1Q13835 747 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 SNRNP48Q6IEG0 339 aaKnown RBP18.21■□□□□ 0.51
TMEM53-204ENST00000372243 BICD2Q8TD16 824 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 BRMS1Q9HCU9 246 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 RIC8AQ9NPQ8 531 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 MORF4L1Q9UBU8 362 aa18.21■□□□□ 0.51
TMEM53-204ENST00000372243 THSD7BQ9C0I4 1608 aa18.2■□□□□ 0.5
TMEM53-204ENST00000372243 AOC2O75106 756 aa18.2■□□□□ 0.5
TMEM53-204ENST00000372243 HSPA6P17066 643 aa18.2■□□□□ 0.5
TMEM53-204ENST00000372243 COPB2P35606 906 aa18.2■□□□□ 0.5
TMEM53-204ENST00000372243 ADCY7P51828 1080 aa18.2■□□□□ 0.5
TMEM53-204ENST00000372243 MRPL12P52815 198 aaKnown RBP18.2■□□□□ 0.5
TMEM53-204ENST00000372243 C1QTNF8P60827 252 aa18.2■□□□□ 0.5
TMEM53-204ENST00000372243 RIOX2Q8IUF8 465 aa18.2■□□□□ 0.5
TMEM53-204ENST00000372243 DIS3L2Q8IYB7 885 aaKnown RBP18.2■□□□□ 0.5
TMEM53-204ENST00000372243 SAMD3Q8N6K7 520 aa18.2■□□□□ 0.5
TMEM53-204ENST00000372243 SPATC1LQ9H0A9 340 aa18.2■□□□□ 0.5
TMEM53-204ENST00000372243 FOXP1Q9H334 677 aaPredicted RBP18.2■□□□□ 0.5
TMEM53-204ENST00000372243 SMCHD1A6NHR9 2005 aa18.19■□□□□ 0.5
TMEM53-204ENST00000372243 OPLAHO14841 1288 aa18.19■□□□□ 0.5
TMEM53-204ENST00000372243 ALAS1P13196 640 aa18.19■□□□□ 0.5
TMEM53-204ENST00000372243 U2AF2P26368 475 aaKnown RBP eCLIP18.19■□□□□ 0.5
TMEM53-204ENST00000372243 KRT2P35908 639 aa18.19■□□□□ 0.5
TMEM53-204ENST00000372243 VEGFBP49765 207 aa18.19■□□□□ 0.5
TMEM53-204ENST00000372243 GHRHRQ02643 423 aa18.19■□□□□ 0.5
TMEM53-204ENST00000372243 TAF1CQ15572 869 aaPredicted RBP18.19■□□□□ 0.5
TMEM53-204ENST00000372243 BLIDQ8IZY5 108 aa18.19■□□□□ 0.5
TMEM53-204ENST00000372243 CUL5Q93034 780 aa18.19■□□□□ 0.5
TMEM53-204ENST00000372243 PAGR1Q9BTK6 254 aa18.19■□□□□ 0.5
TMEM53-204ENST00000372243 ZSCAN16Q9H4T2 348 aaPredicted RBP18.19■□□□□ 0.5
TMEM53-204ENST00000372243 PSTPIP2Q9H939 334 aa18.19■□□□□ 0.5
TMEM53-204ENST00000372243 TXNRD2Q9NNW7 524 aa18.19■□□□□ 0.5
TMEM53-204ENST00000372243 MAP3K20Q9NYL2 800 aaKnown RBP18.19■□□□□ 0.5
TMEM53-204ENST00000372243 ZDHHC9Q9Y397 364 aa18.19■□□□□ 0.5
TMEM53-204ENST00000372243 ADGRA2Q96PE1 1338 aa18.19■□□□□ 0.5
TMEM53-204ENST00000372243 M0R2N6 131 aa18.18■□□□□ 0.5
TMEM53-204ENST00000372243 PIK3CDO00329 1044 aa18.18■□□□□ 0.5
TMEM53-204ENST00000372243 SLC25A27O95847 323 aa18.18■□□□□ 0.5
TMEM53-204ENST00000372243 ERVK-9P63128 1117 aa18.18■□□□□ 0.5
TMEM53-204ENST00000372243 ERVK-24P63145 666 aa18.18■□□□□ 0.5
TMEM53-204ENST00000372243 PLS1Q14651 629 aa18.18■□□□□ 0.5
TMEM53-204ENST00000372243 FAM110CQ1W6H9 321 aa18.18■□□□□ 0.5
TMEM53-204ENST00000372243 MCTP2Q6DN12 878 aa18.18■□□□□ 0.5
TMEM53-204ENST00000372243 MCF2L2Q86YR7 1114 aa18.18■□□□□ 0.5
TMEM53-204ENST00000372243 CHST13Q8NET6 341 aa18.18■□□□□ 0.5
TMEM53-204ENST00000372243 CLEC4DQ8WXI8 215 aa18.18■□□□□ 0.5
TMEM53-204ENST00000372243 TRERF1Q96PN7 1200 aa18.18■□□□□ 0.5
TMEM53-204ENST00000372243 ZFYVE28Q9HCC9 887 aa18.18■□□□□ 0.5
TMEM53-204ENST00000372243 RIPK3Q9Y572 518 aa18.18■□□□□ 0.5
TMEM53-204ENST00000372243 BTBD18B2RXH4 712 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 F13A1P00488 732 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 HTRA3P83110 453 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.17■□□□□ 0.5
TMEM53-204ENST00000372243 SHCBP1Q8NEM2 672 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 GPRC5AQ8NFJ5 357 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 MOV10L1Q9BXT6 1211 aaKnown RBP18.17■□□□□ 0.5
TMEM53-204ENST00000372243 RNF146Q9NTX7 359 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 FBXO40Q9UH90 709 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 RBBP6Q7Z6E9 1792 aaKnown RBP18.17■□□□□ 0.5
TMEM53-204ENST00000372243 MEIS2O14770 477 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 CA12O43570 354 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 TLR2O60603 784 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 CLK2P49760 499 aaKnown RBP18.17■□□□□ 0.5
TMEM53-204ENST00000372243 CCNA1P78396 465 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 Q3C1V9 767 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 MCTP1Q6DN14 999 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 BRAPQ7Z569 592 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 REXO1Q8N1G1 1221 aaKnown RBP18.17■□□□□ 0.5
TMEM53-204ENST00000372243 OXER1Q8TDS5 423 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 TNFRSF25Q93038 417 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 ACAD9Q9H845 621 aa18.17■□□□□ 0.5
TMEM53-204ENST00000372243 TAL1P17542 331 aaPredicted RBP18.16■□□□□ 0.5
TMEM53-204ENST00000372243 RESTQ13127 1097 aa18.16■□□□□ 0.5
TMEM53-204ENST00000372243 GNL2Q13823 731 aaKnown RBP18.16■□□□□ 0.5
TMEM53-204ENST00000372243 MUM1L1Q5H9M0 696 aa18.16■□□□□ 0.5
TMEM53-204ENST00000372243 NOSTRINQ8IVI9 506 aa18.16■□□□□ 0.5
TMEM53-204ENST00000372243 ANKRD13CQ8N6S4 541 aa18.16■□□□□ 0.5
TMEM53-204ENST00000372243 CFHR5Q9BXR6 569 aa18.16■□□□□ 0.5
TMEM53-204ENST00000372243 MROH8Q9H579 483 aa18.16■□□□□ 0.5
TMEM53-204ENST00000372243 PCDHA6Q9UN73 950 aa18.16■□□□□ 0.5
TMEM53-204ENST00000372243 PCDHA8Q9Y5H6 950 aa18.16■□□□□ 0.5
TMEM53-204ENST00000372243 KIF28PB7ZC32 967 aa18.15■□□□□ 0.5
TMEM53-204ENST00000372243 GCOM1H8Y6P7 765 aaPredicted RBP18.15■□□□□ 0.5
TMEM53-204ENST00000372243 NFIBO00712 420 aa18.15■□□□□ 0.5
TMEM53-204ENST00000372243 POLR2MP0CAP2 368 aa18.15■□□□□ 0.5
TMEM53-204ENST00000372243 BCRP11274 1271 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms