RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 ZNF18P17022 549 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 MAGEA1P43355 309 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 SARSP49591 514 aaKnown RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 GABPB2Q8TAK5 448 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 ATP2A3Q93084 1043 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 KLHL29Q96CT2 875 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 CCT8L1PA6NM43 557 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 RAPGEF1Q13905 1077 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 E2F4Q16254 413 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 MTHFSDQ2M296 383 aaKnown RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 INTS9Q9NV88 658 aaKnown RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 OVOS2A0A0G2JMS6 1433 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 NEBLO76041 1014 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 MAN2A1Q16706 1144 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 LIN9Q5TKA1 542 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 CCDC68Q9H2F9 335 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 ZSWIM4Q9H7M6 989 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 RABGAP1Q9Y3P9 1069 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 KRT79Q5XKE5 535 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 ATF3P18847 181 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 SLC9C2Q5TAH2 1124 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 SLC35F6Q8N357 371 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 NRBF2Q96F24 287 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 RIPOR2Q9Y4F9 1068 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 PCDHA13Q9Y5I0 950 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 PRPF3O43395 683 aaKnown RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 KRT13P13646 458 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 MCUR1Q96AQ8 359 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 TRIM11Q96F44 468 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 EYA1Q99502 592 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 MROH5Q6ZUA9 1318 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 STK10O94804 968 aaKnown RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 PUM3Q15397 648 aaKnown RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 PPP1R7Q15435 360 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 MUM1Q2TAK8 710 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 SFMBT2Q5VUG0 894 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 COPS6Q7L5N1 327 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 SH3TC2Q8TF17 1288 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 CDC42BPAQ5VT25 1732 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 TBCCQ15814 346 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 LDHAL6AQ6ZMR3 332 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 IFNL2Q8IZJ0 200 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 TERB1Q8NA31 727 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 SRGNP10124 158 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 RNMTO43148 476 aaKnown RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 NME8Q8N427 588 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 NOC4LQ9BVI4 516 aaKnown RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 TARBP1Q13395 1621 aaKnown RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 JAK2O60674 1132 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 PNMA8AQ86V59 439 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 BICD1Q96G01 975 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 HSPD1P10809 573 aaKnown RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 HPCAL4Q9UM19 191 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 ATP8B3O60423 1300 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 MLH3Q9UHC1 1453 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 ESRRGP62508 458 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 GUCY1B3Q02153 619 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 ACTN3Q08043 901 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 TBX2Q13207 712 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 ZNF572Q7Z3I7 529 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 FRMD4BQ9Y2L6 1034 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 ERVV-2B6SEH9 535 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 SHOX2O60902 331 aaPredicted RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 SERPINB4P48594 390 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 STRN3Q13033 797 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 TRPC3Q13507 836 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 ANKRD20A3Q5VUR7 823 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 KRIT1O00522 736 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 FMNL1O95466 1100 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 ARMCX5Q6P1M9 558 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 CEP63Q96MT8 703 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 WNT8AQ9H1J5 351 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 NLRP2Q9NX02 1062 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 ARMCX3Q9UH62 379 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 PTH1RQ03431 593 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 RMDN2Q96LZ7 410 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 AGTP01019 485 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 HSPA8P11142 646 aaKnown RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 CCT6AP40227 531 aaKnown RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 GSCP56915 257 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 SCRN1Q12765 414 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 N4BP2L2Q92802 583 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 UBN1Q9NPG3 1134 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 PASKQ96RG2 1323 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 PARP1P09874 1014 aaKnown RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 SKIV2L2P42285 1042 aaKnown RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 SLFN12Q8IYM2 578 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 ATL2Q8NHH9 583 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 ERGIC2Q96RQ1 377 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 RPN1P04843 607 aaKnown RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 FRA10AC1Q70Z53 315 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 TRMT10CQ7L0Y3 403 aaKnown RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 PEX26Q7Z412 305 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 ARHGEF18Q6ZSZ5 1173 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 HAUS2Q9NVX0 235 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 PECAM1P16284 738 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 SYCP2LQ5T4T6 812 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 SNX12Q9UMY4 172 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 NRXN1Q9ULB1 1477 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms