RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 STX17P56962 302 aa22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 CDKAL1Q5VV42 579 aa22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 DCAF4Q8WV16 495 aa22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 MAGEF1Q9HAY2 307 aa22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 KBTBD4Q9NVX7 518 aa22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 ATRNL1Q5VV63 1379 aa22.97■■□□□ 1.27
CHRNA3-202ENST00000348639 A0A1B0GTH6 734 aa22.97■■□□□ 1.27
CHRNA3-202ENST00000348639 USP17L10C9JJH3 530 aa22.97■■□□□ 1.27
CHRNA3-202ENST00000348639 TBX2Q13207 712 aaPredicted RBP22.97■■□□□ 1.27
CHRNA3-202ENST00000348639 SEMA3FQ13275 785 aa22.97■■□□□ 1.27
CHRNA3-202ENST00000348639 CABP7Q86V35 215 aa22.97■■□□□ 1.27
CHRNA3-202ENST00000348639 CCDC112Q8NEF3 446 aa22.97■■□□□ 1.27
CHRNA3-202ENST00000348639 KCNA3P22001 575 aa22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 GTF2F1P35269 517 aaKnown RBP eCLIP22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 NR1I3Q14994 352 aa22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 TMEM179Q6ZVK1 233 aa22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 MTMR9Q96QG7 549 aa22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 TMX1Q9H3N1 280 aa22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 RWDD2AQ9UIY3 292 aa22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 CTNND2Q9UQB3 1225 aa22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 CLK2P49760 499 aaKnown RBP22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 KCNB1Q14721 858 aa22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 SPECC1LQ69YQ0 1117 aa22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 NYAP1Q6ZVC0 841 aa22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 APTXQ7Z2E3 356 aaKnown RBP22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 POTEDQ86YR6 584 aa22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 IGSF22Q8N9C0 903 aa22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 PSMD1Q99460 953 aa22.96■■□□□ 1.27
CHRNA3-202ENST00000348639 COL2A1P02458 1487 aaPredicted RBP22.95■■□□□ 1.26
CHRNA3-202ENST00000348639 PSMD14O00487 310 aa22.95■■□□□ 1.26
CHRNA3-202ENST00000348639 GDF11O95390 407 aa22.95■■□□□ 1.26
CHRNA3-202ENST00000348639 RSBN1LQ6PCB5 846 aaPredicted RBP22.95■■□□□ 1.26
CHRNA3-202ENST00000348639 SIAH1Q8IUQ4 282 aa22.95■■□□□ 1.26
CHRNA3-202ENST00000348639 CUL5Q93034 780 aa22.95■■□□□ 1.26
CHRNA3-202ENST00000348639 EDIL3O43854 480 aa22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 TECP42680 631 aa22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 SLC1A4P43007 532 aa22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 MRPL12P52815 198 aaKnown RBP22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 PAK1Q13153 545 aa22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 SEPT2Q15019 361 aa22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 E4F1Q66K89 784 aaPredicted RBP22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 SLFN13Q68D06 897 aa22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 CTAGE1Q96RT6 745 aa22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 PSDA5PKW4 1024 aaPredicted RBP22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 PLCG1P19174 1290 aa22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 ICA1Q05084 483 aa22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 CALCRLQ16602 461 aa22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 ABCB5Q2M3G0 1257 aa22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 SLC16A10Q8TF71 515 aa22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 CSRNP1Q96S65 589 aa22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 PLIN2Q99541 437 aa22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 TRMT1Q9NXH9 659 aaKnown RBP22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 ZBTB12Q9Y330 459 aaPredicted RBP22.94■■□□□ 1.26
CHRNA3-202ENST00000348639 TCP10L2B9ZVM9 353 aa22.93■■□□□ 1.26
CHRNA3-202ENST00000348639 FXR2P51116 673 aaKnown RBP eCLIP22.93■■□□□ 1.26
CHRNA3-202ENST00000348639 PTPN14Q15678 1187 aa22.93■■□□□ 1.26
CHRNA3-202ENST00000348639 PTPN21Q16825 1174 aa22.93■■□□□ 1.26
CHRNA3-202ENST00000348639 LRRC15Q8TF66 581 aa22.93■■□□□ 1.26
CHRNA3-202ENST00000348639 CLRN2A0PK11 232 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 KLRC4O43908 158 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 PPP4R3AQ6IN85 833 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 GLT8D2Q9H1C3 349 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 PSTPIP2Q9H939 334 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 TMOD2Q9NZR1 351 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 PAXBP1Q9Y5B6 917 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 RHOBTB3O94955 611 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 TXKP42681 527 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 PRCPP42785 496 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 TNNI2P48788 182 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 UBE2SQ16763 222 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 KMT5BQ4FZB7 885 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 CEP135Q66GS9 1140 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 OGFOD1Q8N543 542 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 GMCL1P1Q8NEA9 526 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 NELFBQ8WX92 580 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 MMTAG2Q9BU76 263 aaKnown RBP22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 ADD3Q9UEY8 706 aaKnown RBP22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 GDAQ9Y2T3 454 aa22.92■■□□□ 1.26
CHRNA3-202ENST00000348639 PSME4Q14997 1843 aa22.91■■□□□ 1.26
CHRNA3-202ENST00000348639 SPDYE2BA6NHP3 402 aa22.91■■□□□ 1.26
CHRNA3-202ENST00000348639 SLC37A4O43826 429 aa22.91■■□□□ 1.26
CHRNA3-202ENST00000348639 TDP2O95551 362 aa22.91■■□□□ 1.26
CHRNA3-202ENST00000348639 SPDYE6P0CI01 402 aa22.91■■□□□ 1.26
CHRNA3-202ENST00000348639 QRICH1Q2TAL8 776 aa22.91■■□□□ 1.26
CHRNA3-202ENST00000348639 HDAC9Q9UKV0 1011 aa22.91■■□□□ 1.26
CHRNA3-202ENST00000348639 RIOK3O14730 519 aaKnown RBP22.91■■□□□ 1.26
CHRNA3-202ENST00000348639 VIL1P09327 827 aaKnown RBP22.91■■□□□ 1.26
CHRNA3-202ENST00000348639 DLGAP5Q15398 846 aa22.91■■□□□ 1.26
CHRNA3-202ENST00000348639 TMEM266Q2M3C6 531 aa22.91■■□□□ 1.26
CHRNA3-202ENST00000348639 ADSSL1Q8N142 457 aa22.91■■□□□ 1.26
CHRNA3-202ENST00000348639 CALML4Q96GE6 196 aa22.91■■□□□ 1.26
CHRNA3-202ENST00000348639 F5H6K3 240 aa22.9■■□□□ 1.26
CHRNA3-202ENST00000348639 ZBTB7AO95365 584 aa22.9■■□□□ 1.26
CHRNA3-202ENST00000348639 KLRC3Q07444 240 aa22.9■■□□□ 1.26
CHRNA3-202ENST00000348639 PDIA5Q14554 519 aa22.9■■□□□ 1.26
CHRNA3-202ENST00000348639 FILIP1LQ4L180 1135 aa22.9■■□□□ 1.26
CHRNA3-202ENST00000348639 GMCL1Q96IK5 515 aa22.9■■□□□ 1.26
CHRNA3-202ENST00000348639 LRWD1Q9UFC0 647 aa22.9■■□□□ 1.26
CHRNA3-202ENST00000348639 ATF5Q9Y2D1 282 aaPredicted RBP22.9■■□□□ 1.26
CHRNA3-202ENST00000348639 COL4A5P29400 1685 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms