RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 RFX7Q2KHR2 1363 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 ABCC12Q96J65 1359 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 TRIM49BA6NDI0 452 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 MYCT1Q8N699 235 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 WDR66Q8TBY9 1149 aa16.34■□□□□ 0.21
RRP1B-201ENST00000340648 ARMCX3Q9UH62 379 aaPredicted RBP16.34■□□□□ 0.21
RRP1B-201ENST00000340648 STAT1P42224 750 aa16.33■□□□□ 0.21
RRP1B-201ENST00000340648 TRAF1Q13077 416 aa16.33■□□□□ 0.21
RRP1B-201ENST00000340648 FAM26FQ5R3K3 315 aa16.33■□□□□ 0.21
RRP1B-201ENST00000340648 SMC6Q96SB8 1091 aa16.33■□□□□ 0.21
RRP1B-201ENST00000340648 STRBPQ96SI9 672 aaKnown RBP16.33■□□□□ 0.21
RRP1B-201ENST00000340648 PCDHA4Q9UN74 947 aa16.33■□□□□ 0.21
RRP1B-201ENST00000340648 MYO3AQ8NEV4 1616 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 ERBB3P21860 1342 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 PLEKHA8P1O95397 391 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 UAP1Q16222 522 aaPredicted RBP16.33■□□□□ 0.2
RRP1B-201ENST00000340648 SMCR8Q8TEV9 937 aaPredicted RBP16.33■□□□□ 0.2
RRP1B-201ENST00000340648 NT5C3AQ9H0P0 336 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 STIM2Q9P246 746 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 FRMPD2Q68DX3 1309 aaPredicted RBP16.33■□□□□ 0.2
RRP1B-201ENST00000340648 CLTAP09496 248 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 KCNJ6P48051 423 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 RDH13Q8NBN7 331 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.33■□□□□ 0.2
RRP1B-201ENST00000340648 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.33■□□□□ 0.2
RRP1B-201ENST00000340648 PCDHA13Q9Y5I0 950 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 UBN2Q6ZU65 1347 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 SEMA3EO15041 775 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 PRPF3O43395 683 aaKnown RBP16.33■□□□□ 0.2
RRP1B-201ENST00000340648 UFL1O94874 794 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 VSNL1P62760 191 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 PDCLQ13371 301 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 SNCBQ16143 134 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 TBC1D31Q96DN5 1066 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 THAP9Q9H5L6 903 aa16.33■□□□□ 0.2
RRP1B-201ENST00000340648 EXOC3O60645 756 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 ADAM9Q13443 819 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 USPL1Q5W0Q7 1092 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 TADA2BQ86TJ2 420 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 NGLY1Q96IV0 654 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 H2AFZP0C0S5 128 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 KIF11P52732 1056 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 H2AFVQ71UI9 128 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 CCDC63Q8NA47 563 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 CEP83Q9Y592 693 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 SEC31BQ9NQW1 1179 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 ASAP1Q9ULH1 1129 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 FRMD3A2A2Y4 597 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 NEBLO76041 1014 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 CCNE1P24864 410 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 MAN2A1Q16706 1144 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 ZNF579Q8NAF0 562 aaKnown RBP16.32■□□□□ 0.2
RRP1B-201ENST00000340648 PPFIBP2Q8ND30 876 aa16.32■□□□□ 0.2
RRP1B-201ENST00000340648 ZNF622Q969S3 477 aaKnown RBP eCLIP16.32■□□□□ 0.27e-10■■□□□ 13
RRP1B-201ENST00000340648 ZC3H12CQ9C0D7 883 aaKnown RBP16.32■□□□□ 0.2
RRP1B-201ENST00000340648 E2F5Q15329 346 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 JPH2Q9BR39 696 aaPredicted RBP16.31■□□□□ 0.2
RRP1B-201ENST00000340648 PPP1R12CQ9BZL4 782 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 PCDHA12Q9UN75 941 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 FMR1Q06787 632 aaKnown RBP eCLIP16.31■□□□□ 0.23e-9■■■■■ 27.9
RRP1B-201ENST00000340648 RASGRF1Q13972 1273 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 ICE2Q659A1 982 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 GALNT17Q6IS24 598 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 LMNTD2Q8IXW0 634 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 MICAL1Q8TDZ2 1067 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 STMN2Q93045 179 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 MAGEF1Q9HAY2 307 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 LY9Q9HBG7 655 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 NFU1Q9UMS0 254 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 A2ML1A8K2U0 1454 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 PTPRMP28827 1452 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 NR1D1P20393 614 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 CUEDC2Q9H467 287 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.31■□□□□ 0.2
RRP1B-201ENST00000340648 PARP3Q9Y6F1 533 aa16.31■□□□□ 0.2
RRP1B-201ENST00000340648 CTDNEP1O95476 244 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 IFNAR2P48551 515 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 LARP4BQ92615 738 aaKnown RBP16.3■□□□□ 0.2
RRP1B-201ENST00000340648 PPP1R1BQ9UD71 204 aaPredicted RBP16.3■□□□□ 0.2
RRP1B-201ENST00000340648 RTCBQ9Y3I0 505 aaKnown RBP16.3■□□□□ 0.2
RRP1B-201ENST00000340648 ARAP3Q8WWN8 1544 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 TRIM66O15016 1216 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 GBP1P32455 592 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 ZNF131P52739 623 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 FAM169AQ9Y6X4 670 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 CHD1O14646 1710 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 CCDC160A6NGH7 325 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 PLCG1P19174 1290 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 STX2P32856 288 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 USH1GQ495M9 461 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 ALS2CLQ60I27 953 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 PAF1Q8N7H5 531 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 IMPG2Q9BZV3 1241 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 GNPATO15228 680 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 KIFAP3Q92845 792 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 KDM3AQ9Y4C1 1321 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 HEG1Q9ULI3 1381 aa16.3■□□□□ 0.2
RRP1B-201ENST00000340648 ENGASEQ8NFI3 743 aa16.29■□□□□ 0.2
RRP1B-201ENST00000340648 ARHGEF2Q92974 986 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 226.4 ms