RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 MUM1L1Q5H9M0 696 aa17.99■□□□□ 0.47
VAPA-201ENST00000340541 RASEFQ8IZ41 740 aa17.99■□□□□ 0.47
VAPA-201ENST00000340541 DEFB123Q8N688 67 aa17.99■□□□□ 0.47
VAPA-201ENST00000340541 TRERF1Q96PN7 1200 aa17.99■□□□□ 0.47
VAPA-201ENST00000340541 A1CFQ9NQ94 594 aaKnown RBP17.99■□□□□ 0.47
VAPA-201ENST00000340541 GPHNQ9NQX3 736 aaPredicted RBP17.99■□□□□ 0.47
VAPA-201ENST00000340541 PRKAG2Q9UGJ0 569 aa17.99■□□□□ 0.47
VAPA-201ENST00000340541 CCPG1Q9ULG6 757 aa17.99■□□□□ 0.47
VAPA-201ENST00000340541 LCTP09848 1927 aa17.99■□□□□ 0.47
VAPA-201ENST00000340541 PRC1O43663 620 aa17.98■□□□□ 0.47
VAPA-201ENST00000340541 PARP1P09874 1014 aaKnown RBP17.98■□□□□ 0.47
VAPA-201ENST00000340541 TROAPQ12815 778 aa17.98■□□□□ 0.47
VAPA-201ENST00000340541 WTAPQ15007 396 aa17.98■□□□□ 0.47
VAPA-201ENST00000340541 TSGA10IPQ3SY00 556 aa17.98■□□□□ 0.47
VAPA-201ENST00000340541 TMEM67Q5HYA8 995 aa17.98■□□□□ 0.47
VAPA-201ENST00000340541 C1orf53Q5VUE5 145 aa17.98■□□□□ 0.47
VAPA-201ENST00000340541 SLC39A5Q6ZMH5 540 aa17.98■□□□□ 0.47
VAPA-201ENST00000340541 ANKRD35Q8N283 1001 aa17.98■□□□□ 0.47
VAPA-201ENST00000340541 STAG2Q8N3U4 1231 aa17.98■□□□□ 0.47
VAPA-201ENST00000340541 SLC17A8Q8NDX2 589 aa17.98■□□□□ 0.47
VAPA-201ENST00000340541 DDX11Q96FC9 970 aa17.98■□□□□ 0.47
VAPA-201ENST00000340541 MTA3Q9BTC8 594 aa17.98■□□□□ 0.47
VAPA-201ENST00000340541 LY9Q9HBG7 655 aa17.98■□□□□ 0.47
VAPA-201ENST00000340541 MAD2L2Q9UI95 211 aa17.98■□□□□ 0.47
VAPA-201ENST00000340541 WDR19Q8NEZ3 1342 aa17.98■□□□□ 0.47
VAPA-201ENST00000340541 ERICH2A1L162 156 aa17.97■□□□□ 0.47
VAPA-201ENST00000340541 PALM3A6NDB9 673 aaPredicted RBP17.97■□□□□ 0.47
VAPA-201ENST00000340541 MCM5P33992 734 aa17.97■□□□□ 0.47
VAPA-201ENST00000340541 MDM2Q00987 491 aaPredicted RBP17.97■□□□□ 0.47
VAPA-201ENST00000340541 GRM4Q14833 912 aa17.97■□□□□ 0.47
VAPA-201ENST00000340541 SART3Q15020 963 aaKnown RBP17.97■□□□□ 0.47
VAPA-201ENST00000340541 SNX17Q15036 470 aa17.97■□□□□ 0.47
VAPA-201ENST00000340541 SLC35G1Q2M3R5 365 aa17.97■□□□□ 0.47
VAPA-201ENST00000340541 PRAMEF19Q5SWL8 479 aa17.97■□□□□ 0.47
VAPA-201ENST00000340541 GJC2Q5T442 439 aaPredicted RBP17.97■□□□□ 0.47
VAPA-201ENST00000340541 RNF20Q5VTR2 975 aa17.97■□□□□ 0.47
VAPA-201ENST00000340541 FAM109BQ6ICB4 259 aaPredicted RBP17.97■□□□□ 0.47
VAPA-201ENST00000340541 ADGRF4Q8IZF3 695 aa17.97■□□□□ 0.47
VAPA-201ENST00000340541 FAM133AQ8N9E0 248 aa17.97■□□□□ 0.47
VAPA-201ENST00000340541 KCNB2Q92953 911 aa17.97■□□□□ 0.47
VAPA-201ENST00000340541 TINF2Q9BSI4 451 aa17.97■□□□□ 0.47
VAPA-201ENST00000340541 MCM3APO60318 1980 aa17.97■□□□□ 0.47
VAPA-201ENST00000340541 SH2B2O14492 632 aaPredicted RBP17.96■□□□□ 0.47
VAPA-201ENST00000340541 ATN1P54259 1190 aaPredicted RBP17.96■□□□□ 0.47
VAPA-201ENST00000340541 RTP1P59025 263 aa17.96■□□□□ 0.47
VAPA-201ENST00000340541 CNTN2Q02246 1040 aa17.96■□□□□ 0.47
VAPA-201ENST00000340541 ADCK5Q3MIX3 580 aa17.96■□□□□ 0.47
VAPA-201ENST00000340541 MAMDC4Q6UXC1 1216 aa17.96■□□□□ 0.47
VAPA-201ENST00000340541 ZNF467Q7Z7K2 595 aaPredicted RBP17.96■□□□□ 0.47
VAPA-201ENST00000340541 MSL3Q8N5Y2 521 aaKnown RBP17.96■□□□□ 0.47
VAPA-201ENST00000340541 CLEC4DQ8WXI8 215 aa17.96■□□□□ 0.47
VAPA-201ENST00000340541 JMJD4Q9H9V9 463 aa17.96■□□□□ 0.47
VAPA-201ENST00000340541 KLRF2D3W0D1 207 aa17.95■□□□□ 0.46
VAPA-201ENST00000340541 NFIBO00712 420 aa17.95■□□□□ 0.46
VAPA-201ENST00000340541 SNAI1O95863 264 aaPredicted RBP17.95■□□□□ 0.46
VAPA-201ENST00000340541 LRRC41Q15345 812 aa17.95■□□□□ 0.46
VAPA-201ENST00000340541 CDC37Q16543 378 aaPredicted RBP17.95■□□□□ 0.46
VAPA-201ENST00000340541 TMEM87BQ96K49 555 aa17.95■□□□□ 0.46
VAPA-201ENST00000340541 MTMR10Q9NXD2 777 aa17.95■□□□□ 0.46
VAPA-201ENST00000340541 CYP39A1Q9NYL5 469 aa17.95■□□□□ 0.46
VAPA-201ENST00000340541 STXBP5LQ9Y2K9 1186 aa17.95■□□□□ 0.46
VAPA-201ENST00000340541 MYH6P13533 1939 aa17.95■□□□□ 0.46
VAPA-201ENST00000340541 ASTN1O14525 1302 aa17.95■□□□□ 0.46
VAPA-201ENST00000340541 SOWAHBA6NEL2 793 aa17.94■□□□□ 0.46
VAPA-201ENST00000340541 ZNF865P0CJ78 1059 aaPredicted RBP17.94■□□□□ 0.46
VAPA-201ENST00000340541 RARBP10826 455 aa17.94■□□□□ 0.46
VAPA-201ENST00000340541 HSPA4P34932 840 aa17.94■□□□□ 0.46
VAPA-201ENST00000340541 EXOSC10Q01780 885 aaKnown RBP17.94■□□□□ 0.46
VAPA-201ENST00000340541 QRICH1Q2TAL8 776 aa17.94■□□□□ 0.46
VAPA-201ENST00000340541 MTMR8Q96EF0 704 aa17.94■□□□□ 0.46
VAPA-201ENST00000340541 NEK1Q96PY6 1258 aa17.94■□□□□ 0.46
VAPA-201ENST00000340541 PNMA2Q9UL42 364 aa17.94■□□□□ 0.46
VAPA-201ENST00000340541 BAZ2BQ9UIF8 2168 aaKnown RBP17.94■□□□□ 0.46
VAPA-201ENST00000340541 SYNGAP1Q96PV0 1343 aa17.94■□□□□ 0.46
VAPA-201ENST00000340541 COL6A3P12111 3177 aa17.93■□□□□ 0.46
VAPA-201ENST00000340541 POTEB2H3BUK9 544 aa17.93■□□□□ 0.46
VAPA-201ENST00000340541 ADCYAP1R1P41586 468 aa17.93■□□□□ 0.46
VAPA-201ENST00000340541 LIFRP42702 1097 aa17.93■□□□□ 0.46
VAPA-201ENST00000340541 NSMFQ6X4W1 530 aa17.93■□□□□ 0.46
VAPA-201ENST00000340541 CATIPQ7Z7H3 387 aa17.93■□□□□ 0.46
VAPA-201ENST00000340541 RNF180Q86T96 592 aa17.93■□□□□ 0.46
VAPA-201ENST00000340541 ZNF654Q8IZM8 581 aa17.93■□□□□ 0.46
VAPA-201ENST00000340541 PURBQ96QR8 312 aaKnown RBP17.93■□□□□ 0.46
VAPA-201ENST00000340541 LRRC2Q9BYS8 371 aa17.93■□□□□ 0.46
VAPA-201ENST00000340541 XPNPEP3Q9NQH7 507 aa17.93■□□□□ 0.46
VAPA-201ENST00000340541 PHF24Q9UPV7 400 aa17.93■□□□□ 0.46
VAPA-201ENST00000340541 ATP11BQ9Y2G3 1177 aa17.93■□□□□ 0.46
VAPA-201ENST00000340541 CYTH3O43739 400 aa17.92■□□□□ 0.46
VAPA-201ENST00000340541 PPP1R11O60927 126 aaPredicted RBP17.92■□□□□ 0.46
VAPA-201ENST00000340541 DDAH1O94760 285 aa17.92■□□□□ 0.46
VAPA-201ENST00000340541 REC8O95072 547 aa17.92■□□□□ 0.46
VAPA-201ENST00000340541 BAATQ14032 418 aaPredicted RBP17.92■□□□□ 0.46
VAPA-201ENST00000340541 ANO1Q5XXA6 986 aa17.92■□□□□ 0.46
VAPA-201ENST00000340541 MAP3K14Q99558 947 aa17.92■□□□□ 0.46
VAPA-201ENST00000340541 TSEN34Q9BSV6 310 aaKnown RBP17.92■□□□□ 0.46
VAPA-201ENST00000340541 MYL10Q9BUA6 226 aa17.92■□□□□ 0.46
VAPA-201ENST00000340541 KATNBL1Q9H079 304 aa17.92■□□□□ 0.46
VAPA-201ENST00000340541 RIOX1Q9H6W3 641 aa17.92■□□□□ 0.46
VAPA-201ENST00000340541 VAT1LQ9HCJ6 419 aa17.92■□□□□ 0.46
VAPA-201ENST00000340541 CNPY2Q9Y2B0 182 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms