RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Tjap1Q9DCD5 539 aa11.4□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Cd274Q9EP73 290 aa11.4□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Slc26a4Q9R155 780 aa11.4□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Uso1Q9Z1Z0 959 aaKnown RBP11.4□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 PfasQ5SUR0 1337 aa11.4□□□□□ -0.58
Cpsf3-211ENSMUST00000222968 Gm5934D3Z4U6 212 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Akr1c19G3X9Y6 323 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Tpp1O89023 562 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 NefhP19246 1090 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 SarsP26638 512 aaKnown RBP11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 PpardP35396 440 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Fdx1P46656 188 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Foxn3Q499D0 457 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Pnma5Q5DTT8 618 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Map3k12Q60700 888 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Lamb3Q61087 1168 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Fkbp3Q62446 224 aaKnown RBP11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Haus6Q6NV99 933 aaKnown RBP11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Prpf40bQ80W14 870 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Iqcb1Q8BP00 598 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ano2Q8CFW1 1002 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Vps18Q8R307 973 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Mical1Q8VDP3 1048 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ddx41Q91VN6 622 aaKnown RBP11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Krtap5-3Q9D226 196 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Efhd1Q9D4J1 240 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Krt34Q9D646 392 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Styxl1Q9DAR2 321 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Tmem191cQ9JJB1 302 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 AmfrQ9R049 643 aa11.4□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Nme9A0A1L1SUL6 329 aa11.39□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Arhgap4B1AUY3 965 aa11.39□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Stim1P70302 685 aa11.39□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Lrrc55Q3UY51 311 aa11.39□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Lrrfip1Q3UZ39 729 aaKnown RBP11.39□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Lamc2Q61092 1191 aa11.39□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Igbp1Q61249 340 aa11.39□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Kdm1aQ6ZQ88 853 aa11.39□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Camsap3Q80VC9 1252 aa11.39□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Armc6Q8BNU0 468 aa11.39□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Syce1Q9D495 329 aa11.39□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Galntl5Q9D4M9 431 aa11.39□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Rgs17Q9QZB0 210 aa11.39□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Sec14l1A8Y5H7 715 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Lrrc32G3XA59 663 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ess2O70279 479 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 AgtP11859 477 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Dnm2P39054 870 aaKnown RBP11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Rad23aP54726 363 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ccdc102aQ3TMW1 549 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Brip1Q5SXJ3 1174 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 CtcfQ61164 736 aaKnown RBP11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Fam196bQ6GQV1 535 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Asic1Q6NXK8 526 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Mindy1Q76LS9 468 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Dnph1Q80VJ3 173 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Cracr2bQ80ZJ8 394 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Q8C6G1 249 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Fam13bQ8K2H3 851 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Krt82Q99M74 516 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Apopt1Q9CQW7 192 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 EhhadhQ9DBM2 718 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Egfl6Q9JJZ5 550 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Sertad1Q9JL10 236 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Mkrn1Q9QXP6 481 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Dnajc7Q9QYI3 494 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Col1a1P11087 1453 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Sap30bpQ02614 308 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Acot10Q32MW3 439 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Emc10Q3TAS6 258 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Tmem35bQ3U0Y2 150 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Kctd1Q5M956 257 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ccdc189Q6NZQ0 333 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Igdcc3Q8BQC3 813 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Plekhg6Q8R0J1 787 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Exoc1Q8R3S6 894 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 SmapQ9R0P4 181 aaKnown RBP11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Plcb1Q9Z1B3 1216 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Zkscan5Q9Z1D8 819 aa11.38□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ccdc88cQ6VGS5 2009 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Magea10A2AMW4 325 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Cnbd1B1AWM0 430 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Flvcr1B2RXV4 560 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Chrna9G3X8Z7 479 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 IkbkbO88351 757 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Mx1P09922 631 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Nedd1P33215 660 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Cbx1P83917 185 aaKnown RBP11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Mcm6P97311 821 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ssrp1Q08943 708 aaKnown RBP11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Uri1Q3TLD5 531 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Prom2Q3UUY6 835 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Slc9a2Q3ZAS0 814 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Oxr1Q4KMM3 866 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ncoa7Q6DFV7 943 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Trak2Q6P9N8 913 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 PigsQ6PD26 555 aaKnown RBP11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 D130040H23RikQ8BII3 405 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Ift74Q8BKE9 600 aa11.37□□□□□ -0.59
Cpsf3-211ENSMUST00000222968 Gpcpd1Q8C0L9 675 aa11.37□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms