RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Ercc4Q9QZD4 917 aa17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Klrc1Q9Z202 244 aa17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 VirmaA2AIV2 1811 aaKnown RBP17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Scgb2b11A0A087WR49 112 aa17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Gm28042B7ZCM9 1014 aa17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 AgtP11859 477 aa17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Irx2P81066 474 aa17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Ano9P86044 747 aa17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Ssrp1Q08943 708 aaKnown RBP17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Map9Q3TRR0 646 aa17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Lrrc55Q3UY51 311 aa17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Slc9a2Q3ZAS0 814 aa17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Cct6bQ61390 531 aa17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 St5Q924W7 1134 aa17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Rhobtb3Q9CTN4 611 aa17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Znf287Q9EQB9 759 aa17.49■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Krt18P05784 423 aa17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Hspa1lP16627 641 aa17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Pth1rP41593 591 aa17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Pabpc4Q6PHQ9 660 aaKnown RBP17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Fez2Q6TYB5 348 aa17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Ctdp1Q7TSG2 960 aa17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 SltmQ8CH25 1031 aaKnown RBP17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Phc3Q8CHP6 981 aa17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Cd274Q9EP73 290 aa17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Pip4k2aO70172 405 aa17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Gdf10P97737 476 aa17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Cdr2P97817 455 aa17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Cep112Q5PR68 954 aa17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Atp1a2Q6PIE5 1020 aa17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Mtmr4Q91XS1 1190 aa17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Kctd10Q922M3 315 aa17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Akt1s1Q9D1F4 257 aa17.48■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Etnk2A7MCT6 385 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Adam7O35227 789 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 ItpripQ3TNL8 555 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Camsap3Q80VC9 1252 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Sash3Q8K352 380 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Onecut3Q8K557 490 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Slc51aQ8R000 340 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Rab3il1Q8VDV3 383 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Dnajc19Q9CQV7 116 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Sec14l1A8Y5H7 715 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Prl2c3P04768 224 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Sh3bp1P55194 680 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Anp32eP97822 260 aaKnown RBP17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Acot10Q32MW3 439 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Tsr1Q5SWD9 803 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Best3Q6H1V1 669 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Map3k11Q80XI6 850 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Ccdc172Q810N9 267 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Stac3Q8BZ71 360 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Tmem192Q9CXT7 266 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Gdf11Q9Z1W4 405 aa17.47■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Chrna9G3X8Z7 479 aa17.46■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Tshz1Q5DTH5 1084 aa17.46■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Clca4aQ6Q473 924 aa17.46■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Arhgef19Q8BWA8 802 aa17.46■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Sorbs3Q9R1Z8 733 aa17.46■□□□□ 0.39
Sdc1-205ENSMUST00000171158 Gm3409A0A0G2JE67 319 aa17.46■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Dnai2A2AC93 623 aa17.46■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Pcsk7Q61139 770 aa17.46■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Glra4Q61603 456 aa17.46■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Sema4bQ62179 823 aa17.46■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Jade2Q6ZQF7 829 aa17.46■□□□□ 0.38
Sdc1-205ENSMUST00000171158 D130040H23RikQ8BII3 405 aa17.46■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Dclk3Q8BWQ5 790 aa17.46■□□□□ 0.38
Sdc1-205ENSMUST00000171158 MypopQ8R4U1 393 aa17.46■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Card14Q99KF0 999 aa17.46■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Fsip1Q9D3V5 435 aa17.46■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Inpp4aQ9EPW0 939 aa17.46■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Tpcn1Q9EQJ0 817 aa17.46■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Fxr2Q9WVR4 673 aaKnown RBP17.46■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Psmd14O35593 310 aa17.45■□□□□ 0.38
Sdc1-205ENSMUST00000171158 LbrQ3U9G9 626 aaKnown RBP17.45■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Glg1Q61543 1175 aaKnown RBP17.45■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Sdccag8Q80UF4 717 aa17.45■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Chrna2Q91X60 512 aa17.45■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Pcdhgc5Q91XW9 944 aa17.45■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Txnrd3Q99MD6 652 aa17.45■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Dbndd2Q9CRD4 158 aa17.45■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Gtf2iQ9ESZ8 998 aaKnown RBP17.45■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Nlrp5Q9R1M5 1163 aa17.45■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Rsbn1lD3Z0K6 821 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 NpcdF8VQB8 469 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Eif6O55135 245 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Man1a2P39098 641 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Eef2P58252 858 aaKnown RBP17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Tubb4bP68372 445 aaKnown RBP17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Zfp781Q0P5U5 243 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Ctnna3Q65CL1 895 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Krt87Q6IMF0 495 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 KhnynQ80U38 671 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 WhrnQ80VW5 918 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Trmt2aQ8BNV1 574 aaKnown RBP17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Efcab8Q8C9R9 203 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Phf20l1Q8CCJ9 1013 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Smc1aQ9CU62 1233 aaKnown RBP17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Galntl5Q9D4M9 431 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Serpinb12Q9D7P9 423 aa17.44■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 51.2 ms