RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 SOL4P53315 255 aa-1.67□□□□□ -2.68
snR40snR40 YTP1P53584 459 aa-1.67□□□□□ -2.68
snR40snR40 TPS1Q00764 495 aaKnown RBP-1.67□□□□□ -2.68
snR40snR40 IRC25Q07951 179 aa-1.67□□□□□ -2.68
snR40snR40 THP3Q12049 470 aaKnown RBP-1.67□□□□□ -2.68
snR40snR40 DAL5P15365 543 aa-1.68□□□□□ -2.68
snR40snR40 IES6P32617 166 aa-1.68□□□□□ -2.68
snR40snR40 ALK2P32789 676 aaPredicted RBP-1.68□□□□□ -2.68
snR40snR40 MTR2P34232 184 aaKnown RBP-1.68□□□□□ -2.68
snR40snR40 AXL2P38928 823 aa-1.68□□□□□ -2.68
snR40snR40 WWM1P43582 211 aaKnown RBP-1.68□□□□□ -2.68
snR40snR40 YPS5P53057 165 aa-1.68□□□□□ -2.68
snR40snR40 HER2Q03557 464 aa-1.68□□□□□ -2.68
snR40snR40 BRE1Q07457 700 aaKnown RBP-1.68□□□□□ -2.68
snR40snR40 YDL009CQ12210 107 aa-1.68□□□□□ -2.68
snR40snR40 PCT1P13259 424 aa-1.69□□□□□ -2.68
snR40snR40 MF(ALPHA)2P32435 120 aa-1.69□□□□□ -2.68
snR40snR40 ASF1P32447 279 aa-1.69□□□□□ -2.68
snR40snR40 MNS1P32906 549 aa-1.69□□□□□ -2.68
snR40snR40 KDX1P36005 433 aa-1.69□□□□□ -2.68
snR40snR40 MIG3P39943 394 aa-1.69□□□□□ -2.68
snR40snR40 CSM2P40465 213 aa-1.69□□□□□ -2.68
snR40snR40 PRM5P40476 318 aa-1.69□□□□□ -2.68
snR40snR40 DPH1P40487 425 aaKnown RBP-1.69□□□□□ -2.68
snR40snR40 IDS2P46958 469 aa-1.69□□□□□ -2.68
snR40snR40 CAF40P53829 373 aa-1.69□□□□□ -2.68
snR40snR40 SYO1Q07395 620 aa-1.69□□□□□ -2.68
snR40snR40 CDC9P04819 755 aa-1.7□□□□□ -2.68
snR40snR40 HMG1P12683 1054 aa-1.7□□□□□ -2.68
snR40snR40 SKN1P33336 771 aa-1.7□□□□□ -2.68
snR40snR40 UBP12P39538 1254 aa-1.7□□□□□ -2.68
snR40snR40 BFA1P47113 574 aa-1.7□□□□□ -2.68
snR40snR40 PEF1P53238 335 aa-1.7□□□□□ -2.68
snR40snR40 ZRG17P53735 605 aa-1.7□□□□□ -2.68
snR40snR40 SQS1P53866 767 aaKnown RBP-1.7□□□□□ -2.68
snR40snR40 CBK1P53894 756 aa-1.7□□□□□ -2.68
snR40snR40 INN1P53901 409 aa-1.7□□□□□ -2.68
snR40snR40 DIC1Q06143 298 aa-1.7□□□□□ -2.68
snR40snR40 TDA5Q06417 326 aaKnown RBP-1.7□□□□□ -2.68
snR40snR40 ATG33Q06485 197 aa-1.7□□□□□ -2.68
snR40snR40 RDR1Q08904 546 aa-1.7□□□□□ -2.68
snR40snR40 YBR255C-AQ3E776 120 aa-1.7□□□□□ -2.68
snR40snR40 YOR338WQ99326 363 aa-1.7□□□□□ -2.68
snR40snR40 PDE1P22434 369 aa-1.71□□□□□ -2.68
snR40snR40 NAT2P37293 288 aa-1.71□□□□□ -2.68
snR40snR40 AFG3P39925 761 aa-1.71□□□□□ -2.68
snR40snR40 VFA1P40080 203 aa-1.71□□□□□ -2.68
snR40snR40 YGL262WP53054 175 aa-1.71□□□□□ -2.68
snR40snR40 AIM14P53109 570 aa-1.71□□□□□ -2.68
snR40snR40 YGR067CP53243 804 aa-1.71□□□□□ -2.68
snR40snR40 HST4P53688 370 aa-1.71□□□□□ -2.68
snR40snR40 CRF1Q04930 467 aa-1.71□□□□□ -2.68
snR40snR40 RRP15Q06511 250 aaPredicted RBP-1.71□□□□□ -2.68
snR40snR40 YOR283WQ12040 230 aaKnown RBP-1.71□□□□□ -2.68
snR40snR40 RTK1Q12100 620 aaPredicted RBP-1.71□□□□□ -2.68
snR40snR40 RAP1P11938 827 aa-1.72□□□□□ -2.68
snR40snR40 HSP60P19882 572 aaKnown RBP-1.72□□□□□ -2.68
snR40snR40 SNC1P31109 117 aa-1.72□□□□□ -2.68
snR40snR40 ADE17P38009 592 aaKnown RBP-1.72□□□□□ -2.68
snR40snR40 STP2P38704 541 aa-1.72□□□□□ -2.68
snR40snR40 DSE2P38844 325 aa-1.72□□□□□ -2.68
snR40snR40 FUN12P39730 1002 aaKnown RBP-1.72□□□□□ -2.68
snR40snR40 ALD5P40047 520 aaKnown RBP-1.72□□□□□ -2.68
snR40snR40 FMP10P40098 244 aa-1.72□□□□□ -2.68
snR40snR40 YJL027CP47063 138 aaPredicted RBP-1.72□□□□□ -2.68
snR40snR40 VAC7P53950 1165 aa-1.72□□□□□ -2.68
snR40snR40 MCH1Q07376 486 aa-1.72□□□□□ -2.68
snR40snR40 PLP2Q12017 286 aa-1.72□□□□□ -2.68
snR40snR40 NFT1P0CE68 1218 aa-1.73□□□□□ -2.69
snR40snR40 MRP13P12686 339 aa-1.73□□□□□ -2.69
snR40snR40 OSH3P38713 996 aaKnown RBP-1.73□□□□□ -2.69
snR40snR40 SSU1P41930 458 aa-1.73□□□□□ -2.69
snR40snR40 MSY1P48527 492 aa-1.73□□□□□ -2.69
snR40snR40 RTA1P53047 317 aa-1.73□□□□□ -2.69
snR40snR40 PCP1P53259 346 aa-1.73□□□□□ -2.69
snR40snR40 ALG12P53730 551 aa-1.73□□□□□ -2.69
snR40snR40 IBD2P53892 351 aa-1.73□□□□□ -2.69
snR40snR40 BNA5Q05979 453 aa-1.73□□□□□ -2.69
snR40snR40 THP1Q08231 455 aa-1.73□□□□□ -2.69
snR40snR40 WRS1Q12109 432 aaKnown RBP-1.73□□□□□ -2.69
snR40snR40 TFC7Q12415 435 aa-1.73□□□□□ -2.69
snR40snR40 LEU4P06208 619 aaKnown RBP-1.74□□□□□ -2.69
snR40snR40 VAS1P07806 1104 aaKnown RBP-1.74□□□□□ -2.69
snR40snR40 CDC26P14724 124 aa-1.74□□□□□ -2.69
snR40snR40 SRP54P20424 541 aaKnown RBP-1.74□□□□□ -2.69
snR40snR40 TKL2P33315 681 aa-1.74□□□□□ -2.69
snR40snR40 PCM1P38628 557 aaKnown RBP-1.74□□□□□ -2.69
snR40snR40 CWC25P53854 179 aaKnown RBP-1.74□□□□□ -2.69
snR40snR40 MDG1P53885 366 aa-1.74□□□□□ -2.69
snR40snR40 ADE16P54113 591 aaKnown RBP-1.74□□□□□ -2.69
snR40snR40 PIR3Q03180 325 aa-1.74□□□□□ -2.69
snR40snR40 CSR1Q06705 408 aaKnown RBP-1.74□□□□□ -2.69
snR40snR40 APE1P14904 514 aa-1.75□□□□□ -2.69
snR40snR40 PRE2P30656 287 aaKnown RBP-1.75□□□□□ -2.69
snR40snR40 TFC3P34111 1160 aa-1.75□□□□□ -2.69
snR40snR40 MIA40P36046 403 aa-1.75□□□□□ -2.69
snR40snR40 STB6P36085 766 aa-1.75□□□□□ -2.69
snR40snR40 MRPL27P36526 146 aaPredicted RBP-1.75□□□□□ -2.69
snR40snR40 ARP1P38696 384 aa-1.75□□□□□ -2.69
snR40snR40 PCL7P40186 285 aa-1.75□□□□□ -2.69
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms