RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	YER130C	P39959	443 aa		2.44	□□□□□ -2.02
YPR039W	YPR039W	AXL1	P40851	1208 aa		2.44	□□□□□ -2.02
YPR039W	YPR039W	ARC1	P46672	376 aa	Known RBP	2.44	□□□□□ -2.02
YPR039W	YPR039W	RPS10B	P46784	105 aa	Known RBP	2.44	□□□□□ -2.02
YPR039W	YPR039W	PYK2	P52489	506 aa	Known RBP	2.44	□□□□□ -2.02
YPR039W	YPR039W	BSC5	P53755	489 aa		2.44	□□□□□ -2.02
YPR039W	YPR039W	TDA7	P53882	636 aa	Predicted RBP	2.44	□□□□□ -2.02
YPR039W	YPR039W	MSS11	Q03825	758 aa		2.44	□□□□□ -2.02
YPR039W	YPR039W	ECM30	Q06673	1274 aa		2.44	□□□□□ -2.02
YPR039W	YPR039W	SSK1	Q07084	712 aa		2.44	□□□□□ -2.02
YPR039W	YPR039W	FMP45	Q07651	309 aa		2.44	□□□□□ -2.02
YPR039W	YPR039W	GRC3	Q07845	632 aa		2.44	□□□□□ -2.02
YPR039W	YPR039W	YEH2	Q07950	538 aa		2.44	□□□□□ -2.02
YPR039W	YPR039W	SSP2	Q08646	371 aa		2.44	□□□□□ -2.02
YPR039W	YPR039W	RPS10A	Q08745	105 aa	Predicted RBP	2.44	□□□□□ -2.02
YPR039W	YPR039W	SKM1	Q12469	655 aa		2.44	□□□□□ -2.02
YPR039W	YPR039W	CDC24	P11433	854 aa	Predicted RBP	2.43	□□□□□ -2.02
YPR039W	YPR039W	TYR1	P20049	452 aa		2.43	□□□□□ -2.02
YPR039W	YPR039W	PRE8	P23639	250 aa		2.43	□□□□□ -2.02
YPR039W	YPR039W	CMK1	P27466	446 aa	Known RBP	2.43	□□□□□ -2.02
YPR039W	YPR039W	PRO3	P32263	286 aa	Known RBP	2.43	□□□□□ -2.02
YPR039W	YPR039W	LAG1	P38703	411 aa		2.43	□□□□□ -2.02
YPR039W	YPR039W	RTS1	P38903	757 aa		2.43	□□□□□ -2.02
YPR039W	YPR039W	YGL082W	P53155	381 aa		2.43	□□□□□ -2.02
YPR039W	YPR039W	RSM23	Q01163	450 aa		2.43	□□□□□ -2.02
YPR039W	YPR039W	YMR160W	Q03823	816 aa		2.43	□□□□□ -2.02
YPR039W	YPR039W	RAD30	Q04049	632 aa		2.43	□□□□□ -2.02
YPR039W	YPR039W	DPB4	Q04603	196 aa	Known RBP	2.43	□□□□□ -2.02
YPR039W	YPR039W	VIP1	Q06685	1146 aa	Known RBP	2.43	□□□□□ -2.02
YPR039W	YPR039W	TEN1	Q07921	160 aa		2.43	□□□□□ -2.02
YPR039W	YPR039W	DPB3	P27344	201 aa		2.42	□□□□□ -2.02
YPR039W	YPR039W	AUR1	P36107	401 aa	Predicted RBP	2.42	□□□□□ -2.02
YPR039W	YPR039W	MAL33	P38157	468 aa		2.42	□□□□□ -2.02
YPR039W	YPR039W	DED81	P38707	554 aa	Known RBP	2.42	□□□□□ -2.02
YPR039W	YPR039W	DPH1	P40487	425 aa	Known RBP	2.42	□□□□□ -2.02
YPR039W	YPR039W	PTR3	P43606	678 aa		2.42	□□□□□ -2.02
YPR039W	YPR039W	LYS4	P49367	693 aa	Predicted RBP	2.42	□□□□□ -2.02
YPR039W	YPR039W	SAM50	P53969	484 aa		2.42	□□□□□ -2.02
YPR039W	YPR039W	YMR018W	Q04364	514 aa		2.42	□□□□□ -2.02
YPR039W	YPR039W	DIC1	Q06143	298 aa		2.42	□□□□□ -2.02
YPR039W	YPR039W	RTT109	Q07794	436 aa		2.42	□□□□□ -2.02
YPR039W	YPR039W	ETT1	Q08421	412 aa	Known RBP	2.42	□□□□□ -2.02
YPR039W	YPR039W	PDH1	Q12428	516 aa	Known RBP	2.42	□□□□□ -2.02
YPR039W	YPR039W	MRS3	P10566	314 aa		2.41	□□□□□ -2.02
YPR039W	YPR039W	BUD5	P25300	642 aa	Predicted RBP	2.41	□□□□□ -2.02
YPR039W	YPR039W	RPS2	P25443	254 aa	Known RBP	2.41	□□□□□ -2.02
YPR039W	YPR039W	VPS17	P32913	551 aa		2.41	□□□□□ -2.02
YPR039W	YPR039W	MTR2	P34232	184 aa	Known RBP	2.41	□□□□□ -2.02
YPR039W	YPR039W	YKL100C	P34248	587 aa		2.41	□□□□□ -2.02
YPR039W	YPR039W	YNK1	P36010	153 aa	Known RBP	2.41	□□□□□ -2.02
YPR039W	YPR039W	YTA12	P40341	825 aa		2.41	□□□□□ -2.02
YPR039W	YPR039W	IKS1	P47042	667 aa		2.41	□□□□□ -2.02
YPR039W	YPR039W	YGR127W	P53275	312 aa		2.41	□□□□□ -2.02
YPR039W	YPR039W	SMM1	P53720	384 aa	Known RBP	2.41	□□□□□ -2.02
YPR039W	YPR039W	IMP4	P53941	290 aa	Known RBP	2.41	□□□□□ -2.02
YPR039W	YPR039W	EFM6	P53970	246 aa		2.41	□□□□□ -2.02
YPR039W	YPR039W	YSA1	Q01976	231 aa		2.41	□□□□□ -2.02
YPR039W	YPR039W	YVH1	Q02256	364 aa	Known RBP	2.41	□□□□□ -2.02
YPR039W	YPR039W	YPL014W	Q02606	381 aa		2.41	□□□□□ -2.02
YPR039W	YPR039W	RBA50	Q04418	439 aa		2.41	□□□□□ -2.02
YPR039W	YPR039W	OPY2	Q06810	360 aa		2.41	□□□□□ -2.02
YPR039W	YPR039W	PPT2	Q12036	173 aa		2.41	□□□□□ -2.02
YPR039W	YPR039W	YBR298C-A	Q8TGK4	73 aa		2.41	□□□□□ -2.02
YPR039W	YPR039W	CYB2	P00175	591 aa		2.4	□□□□□ -2.03
YPR039W	YPR039W	ARD1	P07347	238 aa	Predicted RBP	2.4	□□□□□ -2.03
YPR039W	YPR039W	KGD1	P20967	1014 aa	Known RBP	2.4	□□□□□ -2.03
YPR039W	YPR039W	SEC62	P21825	274 aa		2.4	□□□□□ -2.03
YPR039W	YPR039W	SAN1	P22470	610 aa		2.4	□□□□□ -2.03
YPR039W	YPR039W	BOS1	P25385	244 aa		2.4	□□□□□ -2.03
YPR039W	YPR039W	PUP3	P25451	205 aa	Known RBP	2.4	□□□□□ -2.03
YPR039W	YPR039W	SYN8	P31377	255 aa		2.4	□□□□□ -2.03
YPR039W	YPR039W	SSH4	P32343	579 aa		2.4	□□□□□ -2.03
YPR039W	YPR039W	YBL055C	P34220	418 aa	Predicted RBP	2.4	□□□□□ -2.03
YPR039W	YPR039W	ICS2	P38284	255 aa		2.4	□□□□□ -2.03
YPR039W	YPR039W	MDM31	P38880	579 aa		2.4	□□□□□ -2.03
YPR039W	YPR039W	FAR3	P46671	204 aa		2.4	□□□□□ -2.03
YPR039W	YPR039W	DUG3	P53871	357 aa		2.4	□□□□□ -2.03
YPR039W	YPR039W	RHO4	Q00246	291 aa		2.4	□□□□□ -2.03
YPR039W	YPR039W	BUD22	Q04347	519 aa	Known RBP	2.4	□□□□□ -2.03
YPR039W	YPR039W	HCR1	Q05775	265 aa	Known RBP	2.4	□□□□□ -2.03
YPR039W	YPR039W	THI20	Q08224	551 aa		2.4	□□□□□ -2.03
YPR039W	YPR039W	MF(ALPHA)1	P01149	165 aa		2.39	□□□□□ -2.03
YPR039W	YPR039W	RPL19A	P0CX82	189 aa	Known RBP	2.39	□□□□□ -2.03
YPR039W	YPR039W	RPL19B	P0CX83	189 aa	Predicted RBP	2.39	□□□□□ -2.03
YPR039W	YPR039W	IMG1	P25626	169 aa		2.39	□□□□□ -2.03
YPR039W	YPR039W	ECM15	P35195	104 aa		2.39	□□□□□ -2.03
YPR039W	YPR039W	NUP133	P36161	1157 aa		2.39	□□□□□ -2.03
YPR039W	YPR039W	YBL029W	P38201	376 aa		2.39	□□□□□ -2.03
YPR039W	YPR039W	MEP3	P53390	489 aa		2.39	□□□□□ -2.03
YPR039W	YPR039W	RPM2	Q02773	1202 aa		2.39	□□□□□ -2.03
YPR039W	YPR039W	YMR087W	Q04299	284 aa		2.39	□□□□□ -2.03
YPR039W	YPR039W	GLO2	Q05584	274 aa		2.39	□□□□□ -2.03
YPR039W	YPR039W	LUC7	Q07508	261 aa	Predicted RBP	2.39	□□□□□ -2.03
YPR039W	YPR039W	SDH5	Q08230	162 aa		2.39	□□□□□ -2.03
YPR039W	YPR039W	YPL272C	Q08984	517 aa		2.39	□□□□□ -2.03
YPR039W	YPR039W	RPL15A	P05748	204 aa	Known RBP	2.38	□□□□□ -2.03
YPR039W	YPR039W	PEP5	P12868	1029 aa		2.38	□□□□□ -2.03
YPR039W	YPR039W	PRP16	P15938	1071 aa	Predicted RBP	2.38	□□□□□ -2.03
YPR039W	YPR039W	KAR3	P17119	729 aa		2.38	□□□□□ -2.03
YPR039W	YPR039W	YCK1	P23291	538 aa		2.38	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms