RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	YGR111W	P53265	400 aa		4.49	□□□□□ -1.69
CMR3	YPR013C	SEC5	P89102	971 aa		4.49	□□□□□ -1.69
CMR3	YPR013C	HRD3	Q05787	833 aa		4.49	□□□□□ -1.69
CMR3	YPR013C	LEA1	Q08963	238 aa	Predicted RBP	4.49	□□□□□ -1.69
CMR3	YPR013C	RPN5	Q12250	445 aa	Known RBP	4.49	□□□□□ -1.69
CMR3	YPR013C	TPK2	P06245	380 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	PET111	P08468	800 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	BOS1	P25385	244 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	RML2	P32611	393 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	LTV1	P34078	463 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	YMC2	P38087	329 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	RRT2	P38332	387 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	MSR1	P38714	643 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	MIT1	P40002	666 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	YFL015C	P43578	164 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	YGL117W	P53133	265 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	YNL144C	P53907	740 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	PDS5	Q04264	1277 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	MMR1	Q06324	491 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.48	□□□□□ -1.69	not detected
CMR3	YPR013C	ETT1	Q08421	412 aa	Known RBP	4.48	□□□□□ -1.69
CMR3	YPR013C	APL4	Q12028	832 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	YDL007C-A	Q2V2Q0	85 aa		4.48	□□□□□ -1.69
CMR3	YPR013C	SNT1	P25357	1226 aa		4.47	□□□□□ -1.69
CMR3	YPR013C	PMI40	P29952	429 aa	Known RBP	4.47	□□□□□ -1.69
CMR3	YPR013C	SMI1	P32566	505 aa		4.47	□□□□□ -1.69
CMR3	YPR013C	YBL055C	P34220	418 aa	Predicted RBP	4.47	□□□□□ -1.69
CMR3	YPR013C	TUL1	P36096	758 aa		4.47	□□□□□ -1.69
CMR3	YPR013C	HEL1	P36113	551 aa		4.47	□□□□□ -1.69
CMR3	YPR013C	UIP5	P36137	443 aa		4.47	□□□□□ -1.69
CMR3	YPR013C	NUP133	P36161	1157 aa		4.47	□□□□□ -1.69
CMR3	YPR013C	FTH1	P38310	465 aa		4.47	□□□□□ -1.69
CMR3	YPR013C	YNL058C	P53947	316 aa		4.47	□□□□□ -1.69
CMR3	YPR013C	HOT1	Q03213	719 aa		4.47	□□□□□ -1.69
CMR3	YPR013C	ARO10	Q06408	635 aa		4.47	□□□□□ -1.69
CMR3	YPR013C	DCI1	Q08558	271 aa		4.47	□□□□□ -1.69
CMR3	YPR013C	KEL3	Q08979	651 aa	Predicted RBP	4.47	□□□□□ -1.69
CMR3	YPR013C	CFT2	Q12102	859 aa	Predicted RBP	4.47	□□□□□ -1.69
CMR3	YPR013C	YMR084W	A2P2R3	262 aa		4.46	□□□□□ -1.7
CMR3	YPR013C	RPL7A	P05737	244 aa	Known RBP	4.46	□□□□□ -1.7
CMR3	YPR013C	YML002W	P0CF17	737 aa		4.46	□□□□□ -1.7
CMR3	YPR013C	MRP2	P10663	115 aa	Predicted RBP	4.46	□□□□□ -1.7
CMR3	YPR013C	PPH22	P23595	377 aa		4.46	□□□□□ -1.7
CMR3	YPR013C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.46	□□□□□ -1.7	not detected
CMR3	YPR013C	IDH2	P28241	369 aa	Known RBP	4.46	□□□□□ -1.7
CMR3	YPR013C	YJU2	P28320	278 aa	Predicted RBP	4.46	□□□□□ -1.7
CMR3	YPR013C	CTS1	P29029	562 aa		4.46	□□□□□ -1.7
CMR3	YPR013C	DAD2	P36162	133 aa		4.46	□□□□□ -1.7
CMR3	YPR013C	NTC20	P38302	140 aa	Predicted RBP	4.46	□□□□□ -1.7
CMR3	YPR013C	TSC10	P38342	320 aa		4.46	□□□□□ -1.7
CMR3	YPR013C	MEP1	P40260	492 aa		4.46	□□□□□ -1.7
CMR3	YPR013C	TDA10	P42938	290 aa		4.46	□□□□□ -1.7
CMR3	YPR013C	CCT7	P42943	550 aa	Known RBP	4.46	□□□□□ -1.7
CMR3	YPR013C	FYV8	P46949	817 aa	Known RBP	4.46	□□□□□ -1.7
CMR3	YPR013C	HEL2	Q05580	639 aa	Known RBP	4.46	□□□□□ -1.7
CMR3	YPR013C	RRP45	Q05636	305 aa	Known RBP	4.46	□□□□□ -1.7
CMR3	YPR013C	TEN1	Q07921	160 aa		4.46	□□□□□ -1.7
CMR3	YPR013C	FRE3	Q08905	711 aa		4.46	□□□□□ -1.7
CMR3	YPR013C	VPS54	Q12071	889 aa		4.46	□□□□□ -1.7
CMR3	YPR013C	RPL7B	Q12213	244 aa	Known RBP	4.46	□□□□□ -1.7
CMR3	YPR013C	HSP42	Q12329	375 aa		4.46	□□□□□ -1.7
CMR3	YPR013C	RTC1	Q08281	1341 aa		4.46	□□□□□ -1.7
CMR3	YPR013C	HIP1	P06775	603 aa		4.45	□□□□□ -1.7
CMR3	YPR013C	RPL1A	P0CX43	217 aa	Known RBP	4.45	□□□□□ -1.7
CMR3	YPR013C	RPL1B	P0CX44	217 aa	Known RBP	4.45	□□□□□ -1.7
CMR3	YPR013C	PMA2	P19657	947 aa		4.45	□□□□□ -1.7
CMR3	YPR013C	MSP1	P28737	362 aa		4.45	□□□□□ -1.7
CMR3	YPR013C	SLM4	P38247	162 aa		4.45	□□□□□ -1.7
CMR3	YPR013C	NET1	P47035	1189 aa		4.45	□□□□□ -1.7
CMR3	YPR013C	URB2	P47108	1174 aa		4.45	□□□□□ -1.7
CMR3	YPR013C	ASN1	P49089	572 aa	Known RBP	4.45	□□□□□ -1.7
CMR3	YPR013C	YGL138C	P53122	345 aa		4.45	□□□□□ -1.7
CMR3	YPR013C	ERG26	P53199	349 aa	Known RBP	4.45	□□□□□ -1.7
CMR3	YPR013C	CAF130	P53280	1122 aa	Predicted RBP	4.45	□□□□□ -1.7
CMR3	YPR013C	TOF1	P53840	1238 aa		4.45	□□□□□ -1.7
CMR3	YPR013C	SKO1	Q02100	647 aa		4.45	□□□□□ -1.7
CMR3	YPR013C	YMR206W	Q03695	313 aa		4.45	□□□□□ -1.7
CMR3	YPR013C	YLR456W	Q06199	204 aa		4.45	□□□□□ -1.7
CMR3	YPR013C	HBT1	Q07653	1046 aa	Known RBP	4.45	□□□□□ -1.7
CMR3	YPR013C	RTT109	Q07794	436 aa		4.45	□□□□□ -1.7
CMR3	YPR013C	CDC45	Q08032	650 aa		4.45	□□□□□ -1.7
CMR3	YPR013C	YOL159C	Q08300	171 aa		4.45	□□□□□ -1.7
CMR3	YPR013C	REX3	Q12090	404 aa		4.45	□□□□□ -1.7
CMR3	YPR013C	RPL31B	P0C2H9	113 aa	Known RBP	4.44	□□□□□ -1.7
CMR3	YPR013C	SRV2	P17555	526 aa	Known RBP	4.44	□□□□□ -1.7
CMR3	YPR013C	BUD5	P25300	642 aa	Predicted RBP	4.44	□□□□□ -1.7
CMR3	YPR013C	PIM1	P36775	1133 aa		4.44	□□□□□ -1.7
CMR3	YPR013C	RPL32	P38061	130 aa	Known RBP	4.44	□□□□□ -1.7
CMR3	YPR013C	THI2	P38141	450 aa		4.44	□□□□□ -1.7
CMR3	YPR013C	DBP8	P38719	431 aa		4.44	□□□□□ -1.7
CMR3	YPR013C	RRF1	P38771	230 aa		4.44	□□□□□ -1.7
CMR3	YPR013C	CIN4	P39110	191 aa		4.44	□□□□□ -1.7
CMR3	YPR013C	ATF1	P40353	525 aa		4.44	□□□□□ -1.7
CMR3	YPR013C	STU2	P46675	888 aa		4.44	□□□□□ -1.7
CMR3	YPR013C	YGR149W	P48236	432 aa		4.44	□□□□□ -1.7
CMR3	YPR013C	FMS1	P50264	508 aa		4.44	□□□□□ -1.7
CMR3	YPR013C	KIN4	Q01919	800 aa		4.44	□□□□□ -1.7
CMR3	YPR013C	MUK1	Q02866	612 aa		4.44	□□□□□ -1.7
CMR3	YPR013C	YMR178W	Q03219	274 aa	Known RBP	4.44	□□□□□ -1.7
CMR3	YPR013C	PRP3	Q03338	469 aa	Predicted RBP	4.44	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms