RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CIT3	YPR001W	TAF3	Q12297	353 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	CBP1	P07252	654 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	ILV2	P07342	687 aa	Known RBP	6.6	□□□□□ -1.35
CIT3	YPR001W	CLN1	P20437	546 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	HMX1	P32339	317 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	YKT6	P36015	200 aa	Known RBP	6.6	□□□□□ -1.35
CIT3	YPR001W	SDH8	P38345	138 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	LNP1	P38878	278 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	PIG2	P40187	538 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	SWP82	P43554	623 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	LSB3	P43603	459 aa	Known RBP	6.6	□□□□□ -1.35
CIT3	YPR001W	COS5	P47187	383 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	DIA3	P52290	468 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	SPC98	P53540	846 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	PRM1	P53835	661 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	EFM6	P53970	246 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	PDS5	Q04264	1277 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	COS7	Q07788	383 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	MED2	Q12124	431 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	TRM11	Q12463	433 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	MRPL23	Q12487	163 aa	Predicted RBP	6.6	□□□□□ -1.35
CIT3	YPR001W	YER175W-A	Q8TGU4	54 aa		6.6	□□□□□ -1.35
CIT3	YPR001W	MRP13	P12686	339 aa		6.59	□□□□□ -1.36
CIT3	YPR001W	DPH5	P32469	300 aa	Predicted RBP	6.59	□□□□□ -1.36
CIT3	YPR001W	GLG1	P36143	616 aa		6.59	□□□□□ -1.36
CIT3	YPR001W	DIA4	P38705	446 aa	Predicted RBP	6.59	□□□□□ -1.36
CIT3	YPR001W	FAD1	P38913	306 aa		6.59	□□□□□ -1.36
CIT3	YPR001W	YGR130C	P53278	816 aa		6.59	□□□□□ -1.36
CIT3	YPR001W	COP1	P53622	1201 aa	Known RBP	6.59	□□□□□ -1.36
CIT3	YPR001W	YMR130W	Q04223	302 aa		6.59	□□□□□ -1.36
CIT3	YPR001W	TY3A-G	Q12173	290 aa		6.59	□□□□□ -1.36
CIT3	YPR001W	YRM1	Q12340	786 aa		6.59	□□□□□ -1.36
CIT3	YPR001W	YDL007C-A	Q2V2Q0	85 aa		6.59	□□□□□ -1.36
CIT3	YPR001W	TY3A-I	Q99219	290 aa		6.59	□□□□□ -1.36
CIT3	YPR001W	CYC1	P00044	109 aa	Predicted RBP	6.58	□□□□□ -1.36
CIT3	YPR001W	ILV5	P06168	395 aa	Known RBP	6.58	□□□□□ -1.36
CIT3	YPR001W	STE3	P06783	470 aa		6.58	□□□□□ -1.36
CIT3	YPR001W	SRV2	P17555	526 aa	Known RBP	6.58	□□□□□ -1.36
CIT3	YPR001W	PRP2	P20095	876 aa	Predicted RBP	6.58	□□□□□ -1.36
CIT3	YPR001W	MCM4	P30665	933 aa	Known RBP	6.58	□□□□□ -1.36
CIT3	YPR001W	YME1	P32795	747 aa		6.58	□□□□□ -1.36
CIT3	YPR001W	YBR144C	P34215	104 aa		6.58	□□□□□ -1.36
CIT3	YPR001W	ATP3	P38077	311 aa	Known RBP	6.58	□□□□□ -1.36
CIT3	YPR001W	TOM71	P38825	639 aa	Known RBP	6.58	□□□□□ -1.36
CIT3	YPR001W	ARO9	P38840	513 aa	Predicted RBP	6.58	□□□□□ -1.36
CIT3	YPR001W	LIN1	P38852	340 aa	Predicted RBP	6.58	□□□□□ -1.36
CIT3	YPR001W	YMR124W	P39523	943 aa	Known RBP	6.58	□□□□□ -1.36
CIT3	YPR001W	ULP2	P40537	1034 aa	Predicted RBP	6.58	□□□□□ -1.36
CIT3	YPR001W	RAD17	P48581	401 aa		6.58	□□□□□ -1.36
CIT3	YPR001W	MRPS35	P53292	345 aa		6.58	□□□□□ -1.36
CIT3	YPR001W	SLU7	Q02775	382 aa	Known RBP	6.58	□□□□□ -1.36
CIT3	YPR001W	YDR179W-A	Q03983	463 aa		6.58	□□□□□ -1.36
CIT3	YPR001W	YSH1	Q06224	779 aa	Predicted RBP	6.58	□□□□□ -1.36
CIT3	YPR001W	SIL1	Q08199	421 aa		6.58	□□□□□ -1.36
CIT3	YPR001W	BAG7	Q12128	409 aa		6.58	□□□□□ -1.36
CIT3	YPR001W	ADF1	Q2V2Q1	113 aa		6.58	□□□□□ -1.36
CIT3	YPR001W	VPS63	O13549	108 aa		6.57	□□□□□ -1.36
CIT3	YPR001W	HIS5	P07172	385 aa		6.57	□□□□□ -1.36
CIT3	YPR001W	RPB4	P20433	221 aa	Predicted RBP	6.57	□□□□□ -1.36
CIT3	YPR001W	CAD1	P24813	409 aa	Known RBP	6.57	□□□□□ -1.36
CIT3	YPR001W	NTR2	P36118	322 aa	Predicted RBP	6.57	□□□□□ -1.36
CIT3	YPR001W	YBL028C	P38202	106 aa		6.57	□□□□□ -1.36
CIT3	YPR001W	RFC3	P38629	340 aa		6.57	□□□□□ -1.36
CIT3	YPR001W	FAR3	P46671	204 aa		6.57	□□□□□ -1.36
CIT3	YPR001W	BUD9	P53226	547 aa		6.57	□□□□□ -1.36
CIT3	YPR001W	FHN1	P53279	174 aa		6.57	□□□□□ -1.36
CIT3	YPR001W	CUR1	Q06469	252 aa		6.57	□□□□□ -1.36
CIT3	YPR001W	ULA1	Q12059	462 aa		6.57	□□□□□ -1.36
CIT3	YPR001W	AI3	P03877	415 aa		6.56	□□□□□ -1.36
CIT3	YPR001W	PRP6	P19735	899 aa	Predicted RBP	6.56	□□□□□ -1.36
CIT3	YPR001W	RDS1	P25611	832 aa		6.56	□□□□□ -1.36
CIT3	YPR001W	GSH1	P32477	678 aa		6.56	□□□□□ -1.36
CIT3	YPR001W	MSS1	P32559	526 aa	Predicted RBP	6.56	□□□□□ -1.36
CIT3	YPR001W	MRPL7	P36519	292 aa		6.56	□□□□□ -1.36
CIT3	YPR001W	FUN12	P39730	1002 aa	Known RBP	6.56	□□□□□ -1.36
CIT3	YPR001W	GCN20	P43535	752 aa	Known RBP	6.56	□□□□□ -1.36
CIT3	YPR001W	TOM22	P49334	152 aa		6.56	□□□□□ -1.36
CIT3	YPR001W	MCM6	P53091	1017 aa	Known RBP	6.56	□□□□□ -1.36
CIT3	YPR001W	MPP6	P53725	186 aa	Predicted RBP	6.56	□□□□□ -1.36
CIT3	YPR001W	UTP6	Q02354	440 aa	Known RBP	6.56	□□□□□ -1.36
CIT3	YPR001W	SSY1	Q03770	852 aa		6.56	□□□□□ -1.36
CIT3	YPR001W	INP2	Q03824	705 aa		6.56	□□□□□ -1.36
CIT3	YPR001W	SEG1	Q04279	960 aa		6.56	□□□□□ -1.36
CIT3	YPR001W	YLR297W	Q05899	129 aa		6.56	□□□□□ -1.36
CIT3	YPR001W	RGC1	Q06108	1083 aa	Known RBP	6.56	□□□□□ -1.36
CIT3	YPR001W	MRI1	Q06489	411 aa	Known RBP	6.56	□□□□□ -1.36
CIT3	YPR001W	DFG16	Q99234	619 aa		6.56	□□□□□ -1.36
CIT3	YPR001W	STE2	D6VTK4	431 aa		6.55	□□□□□ -1.36
CIT3	YPR001W	CDC37	P06101	506 aa	Known RBP	6.55	□□□□□ -1.36
CIT3	YPR001W	PDE2	P06776	526 aa		6.55	□□□□□ -1.36
CIT3	YPR001W	ART10	P18634	518 aa	Known RBP	6.55	□□□□□ -1.36
CIT3	YPR001W	KGD1	P20967	1014 aa	Known RBP	6.55	□□□□□ -1.36
CIT3	YPR001W	YSP3	P25036	478 aa		6.55	□□□□□ -1.36
CIT3	YPR001W	PET18	P25362	215 aa		6.55	□□□□□ -1.36
CIT3	YPR001W	SMY1	P32364	656 aa	Known RBP	6.55	□□□□□ -1.36
CIT3	YPR001W	RPT5	P33297	434 aa	Known RBP	6.55	□□□□□ -1.36
CIT3	YPR001W	MRPL37	P36532	105 aa		6.55	□□□□□ -1.36
CIT3	YPR001W	AAP1	P37898	856 aa	Known RBP	6.55	□□□□□ -1.36
CIT3	YPR001W	ZTA1	P38230	334 aa	Known RBP	6.55	□□□□□ -1.36
CIT3	YPR001W	MMS4	P38257	691 aa		6.55	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms