RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUP1	YOR138C	RPN2	P32565	945 aa	Known RBP	7.36	□□□□□ -1.23
RUP1	YOR138C	COX13	P32799	129 aa		7.36	□□□□□ -1.23
RUP1	YOR138C	MAK5	P38112	773 aa	Predicted RBP	7.36	□□□□□ -1.23
RUP1	YOR138C	EFM1	P38732	585 aa		7.36	□□□□□ -1.23
RUP1	YOR138C	SFB3	P38810	929 aa		7.36	□□□□□ -1.23
RUP1	YOR138C	RAD55	P38953	406 aa		7.36	□□□□□ -1.23
RUP1	YOR138C	OPT1	P40897	799 aa		7.36	□□□□□ -1.23
RUP1	YOR138C	BNI4	P53858	892 aa		7.36	□□□□□ -1.23
RUP1	YOR138C	RSC4	Q02206	625 aa		7.36	□□□□□ -1.23
RUP1	YOR138C	NUP100	Q02629	959 aa		7.36	□□□□□ -1.23
RUP1	YOR138C	YML131W	Q03102	365 aa		7.36	□□□□□ -1.23
RUP1	YOR138C	GPI11	Q06636	219 aa		7.36	□□□□□ -1.23
RUP1	YOR138C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	7.36	□□□□□ -1.23	not detected
RUP1	YOR138C	MRH1	Q12117	320 aa	Predicted RBP	7.36	□□□□□ -1.23
RUP1	YOR138C	HER1	Q12276	1246 aa		7.36	□□□□□ -1.23
RUP1	YOR138C	RPN13	O13563	156 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	UBA1	P22515	1024 aa	Known RBP	7.35	□□□□□ -1.23
RUP1	YOR138C	CMK2	P22517	447 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	DBP1	P24784	617 aa	Known RBP	7.35	□□□□□ -1.23
RUP1	YOR138C	PHO87	P25360	923 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	ARP1	P38696	384 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	EGD2	P38879	174 aa	Known RBP	7.35	□□□□□ -1.23
RUP1	YOR138C	YIL089W	P40500	205 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	SNG1	P46950	547 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	GCV2	P49095	1034 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	EFM6	P53970	246 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	UGO1	Q03327	502 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	YMR010W	Q03687	405 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	BLS1	Q06071	122 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	PMT7	Q06644	662 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	PFK27	Q12471	397 aa	Predicted RBP	7.35	□□□□□ -1.23
RUP1	YOR138C	CBP2	P03874	630 aa	Predicted RBP	7.35	□□□□□ -1.23
RUP1	YOR138C	GCN3	P14741	305 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	GUK1	P15454	187 aa	Known RBP	7.35	□□□□□ -1.23
RUP1	YOR138C	CLN1	P20437	546 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	SGF29	P25554	259 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	BUD23	P25627	275 aa	Predicted RBP	7.35	□□□□□ -1.23
RUP1	YOR138C	VMA6	P32366	345 aa	Known RBP	7.35	□□□□□ -1.23
RUP1	YOR138C	MET4	P32389	672 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	EXO84	P38261	753 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	CLU1	Q03690	1277 aa	Known RBP	7.35	□□□□□ -1.23
RUP1	YOR138C	SPO20	Q04359	397 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	ENT2	Q05785	613 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	SSQ1	Q05931	657 aa	Predicted RBP	7.35	□□□□□ -1.23
RUP1	YOR138C	LDB18	Q07887	179 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	ESC8	Q08119	714 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	NTG2	Q08214	380 aa		7.35	□□□□□ -1.23
RUP1	YOR138C	MF(ALPHA)1	P01149	165 aa		7.34	□□□□□ -1.23
RUP1	YOR138C	DOM34	P33309	386 aa		7.34	□□□□□ -1.23
RUP1	YOR138C	YHL026C	P38740	315 aa		7.34	□□□□□ -1.23
RUP1	YOR138C	YAP1801	P38856	637 aa		7.34	□□□□□ -1.23
RUP1	YOR138C	IRC6	P43615	237 aa		7.34	□□□□□ -1.23
RUP1	YOR138C	RMD8	P43620	662 aa		7.34	□□□□□ -1.23
RUP1	YOR138C	YJL055W	P47044	245 aa		7.34	□□□□□ -1.23
RUP1	YOR138C	CLD1	P53264	445 aa		7.34	□□□□□ -1.23
RUP1	YOR138C	COP1	P53622	1201 aa	Known RBP	7.34	□□□□□ -1.23
RUP1	YOR138C	FMP30	Q02883	468 aa		7.34	□□□□□ -1.23
RUP1	YOR138C	SVL3	Q03088	825 aa	Known RBP	7.34	□□□□□ -1.23
RUP1	YOR138C	MGR3	Q04472	501 aa		7.34	□□□□□ -1.23
RUP1	YOR138C	FMP45	Q07651	309 aa		7.34	□□□□□ -1.23
RUP1	YOR138C	SOG2	Q08817	791 aa		7.34	□□□□□ -1.23
RUP1	YOR138C	YLR125W	Q12138	136 aa		7.34	□□□□□ -1.23
RUP1	YOR138C	UPC2	Q12151	913 aa		7.34	□□□□□ -1.23
RUP1	YOR138C	TPK3	P05986	398 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	SPS1	P08458	490 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	TOP3	P13099	656 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	AAT2	P23542	418 aa	Known RBP	7.34	□□□□□ -1.24
RUP1	YOR138C	PHO3	P24031	467 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.34	□□□□□ -1.24	not detected
RUP1	YOR138C	CDC5	P32562	705 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	STE14	P32584	239 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	DUR3	P33413	735 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	TFA2	P36145	328 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	YPK3	P38070	525 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	DHH1	P39517	506 aa	Known RBP	7.34	□□□□□ -1.24
RUP1	YOR138C	KRE29	P40026	464 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	MXR1	P40029	184 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	RGI2	P40188	164 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	ESL1	P40456	1118 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	FKH2	P41813	862 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	DLD2	P46681	530 aa	Known RBP	7.34	□□□□□ -1.24
RUP1	YOR138C	EFM3	P47163	339 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	MTR3	P48240	250 aa	Predicted RBP	7.34	□□□□□ -1.24
RUP1	YOR138C	SAP4	P53036	818 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	ORC3	P54790	616 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	ARP4	P80428	489 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	TOF2	Q02208	771 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	TLG1	Q03322	224 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	APC4	Q04601	652 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	RCO1	Q04779	684 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	YHC1	Q05900	231 aa	Known RBP	7.34	□□□□□ -1.24
RUP1	YOR138C	UAF30	Q08747	228 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	AHA1	Q12449	350 aa	Known RBP	7.34	□□□□□ -1.24
RUP1	YOR138C	RMD5	Q12508	421 aa		7.34	□□□□□ -1.24
RUP1	YOR138C	PUT2	P07275	575 aa		7.33	□□□□□ -1.24
RUP1	YOR138C	HEM1	P09950	548 aa	Predicted RBP	7.33	□□□□□ -1.24
RUP1	YOR138C	ARP2	P32381	391 aa	Known RBP	7.33	□□□□□ -1.24
RUP1	YOR138C	YHL041W	P38730	149 aa		7.33	□□□□□ -1.24
RUP1	YOR138C	MTW1	P39731	289 aa		7.33	□□□□□ -1.24
RUP1	YOR138C	RGI1	P40043	161 aa	Predicted RBP	7.33	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms