RNA–Protein interactions for RNA: YOR003W

YSP3, Transcript of Putative precursor to the subtilisin-like protease III, yeast

Gene YSP3, Length 1,437 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSP3	YOR003W	AAT1	Q01802	451 aa		10.48	□□□□□ -0.73
YSP3	YOR003W	APC9	Q12107	265 aa		10.48	□□□□□ -0.73
YSP3	YOR003W	PST1	Q12355	444 aa		10.48	□□□□□ -0.73
YSP3	YOR003W	SWI5	P08153	709 aa		10.47	□□□□□ -0.73
YSP3	YOR003W	YAR066W	P0CX18	203 aa		10.47	□□□□□ -0.73
YSP3	YOR003W	YHR214W	P0CX19	203 aa		10.47	□□□□□ -0.73
YSP3	YOR003W	RDS2	P19541	446 aa	Known RBP	10.47	□□□□□ -0.73
YSP3	YOR003W	PHA2	P32452	334 aa		10.47	□□□□□ -0.73
YSP3	YOR003W	OAF1	P39720	1047 aa	Predicted RBP	10.47	□□□□□ -0.73
YSP3	YOR003W	GIM4	P40005	111 aa	Known RBP	10.47	□□□□□ -0.73
YSP3	YOR003W	LSC1	P53598	329 aa	Known RBP	10.47	□□□□□ -0.73
YSP3	YOR003W	ROT1	Q03691	256 aa		10.47	□□□□□ -0.73
YSP3	YOR003W	YMR155W	Q03795	547 aa		10.47	□□□□□ -0.73
YSP3	YOR003W	MDY2	Q12285	212 aa		10.47	□□□□□ -0.73
YSP3	YOR003W	GPR1	Q12361	961 aa		10.47	□□□□□ -0.73
YSP3	YOR003W	SEN1	Q00416	2231 aa	Known RBP	10.46	□□□□□ -0.73
YSP3	YOR003W	HSE1	P38753	452 aa		10.46	□□□□□ -0.74
YSP3	YOR003W	CEM1	P39525	442 aa		10.46	□□□□□ -0.74
YSP3	YOR003W	HXT16	P47185	567 aa		10.46	□□□□□ -0.74
YSP3	YOR003W	HXT15	P54854	567 aa		10.46	□□□□□ -0.74
YSP3	YOR003W	SPO20	Q04359	397 aa		10.46	□□□□□ -0.74
YSP3	YOR003W	UTP13	Q05946	817 aa	Known RBP	10.46	□□□□□ -0.74
YSP3	YOR003W	ALR1	Q08269	859 aa		10.46	□□□□□ -0.74
YSP3	YOR003W	ISU2	Q12056	156 aa		10.46	□□□□□ -0.74
YSP3	YOR003W	YPL247C	Q12523	523 aa		10.46	□□□□□ -0.74
YSP3	YOR003W	POL2	P21951	2222 aa	Known RBP	10.46	□□□□□ -0.74
YSP3	YOR003W	RPB4	P20433	221 aa	Predicted RBP	10.45	□□□□□ -0.74
YSP3	YOR003W	YPT52	P36018	234 aa	Known RBP	10.45	□□□□□ -0.74
YSP3	YOR003W	SET3	P36124	751 aa		10.45	□□□□□ -0.74
YSP3	YOR003W	PIM1	P36775	1133 aa		10.45	□□□□□ -0.74
YSP3	YOR003W	UBA4	P38820	440 aa		10.45	□□□□□ -0.74
YSP3	YOR003W	SSU1	P41930	458 aa		10.45	□□□□□ -0.74
YSP3	YOR003W	TDA5	Q06417	326 aa	Known RBP	10.45	□□□□□ -0.74
YSP3	YOR003W	GRS2	Q06817	618 aa		10.45	□□□□□ -0.74
YSP3	YOR003W	YOR223W	Q12015	292 aa		10.45	□□□□□ -0.74
YSP3	YOR003W	YDR056C	Q12025	205 aa		10.45	□□□□□ -0.74
YSP3	YOR003W	RUD3	Q12234	484 aa	Known RBP	10.45	□□□□□ -0.74
YSP3	YOR003W	SRV2	P17555	526 aa	Known RBP	10.44	□□□□□ -0.74
YSP3	YOR003W	NUP120	P35729	1037 aa		10.44	□□□□□ -0.74
YSP3	YOR003W	RRN3	P36070	627 aa		10.44	□□□□□ -0.74
YSP3	YOR003W	YHR045W	P38775	560 aa		10.44	□□□□□ -0.74
YSP3	YOR003W	LIN1	P38852	340 aa	Predicted RBP	10.44	□□□□□ -0.74
YSP3	YOR003W	YAL037W	P39728	267 aa		10.44	□□□□□ -0.74
YSP3	YOR003W	PFK26	P40433	827 aa	Known RBP	10.44	□□□□□ -0.74
YSP3	YOR003W	DUG1	P43616	481 aa	Known RBP	10.44	□□□□□ -0.74
YSP3	YOR003W	NHP10	Q03435	203 aa		10.44	□□□□□ -0.74
YSP3	YOR003W	BNA5	Q05979	453 aa		10.44	□□□□□ -0.74
YSP3	YOR003W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	10.43	□□□□□ -0.74	not detected
YSP3	YOR003W	LTV1	P34078	463 aa		10.43	□□□□□ -0.74
YSP3	YOR003W	SPF1	P39986	1215 aa	Known RBP	10.43	□□□□□ -0.74
YSP3	YOR003W	YRB1	P41920	201 aa	Known RBP	10.43	□□□□□ -0.74
YSP3	YOR003W	LIA1	P47120	325 aa	Known RBP	10.43	□□□□□ -0.74
YSP3	YOR003W	AIF1	P52923	378 aa		10.43	□□□□□ -0.74
YSP3	YOR003W	SGF73	P53165	657 aa		10.43	□□□□□ -0.74
YSP3	YOR003W	TFB3	Q03290	321 aa		10.43	□□□□□ -0.74
YSP3	YOR003W	CTK1	Q03957	528 aa	Known RBP	10.43	□□□□□ -0.74
YSP3	YOR003W	VAM6	Q07468	1049 aa		10.43	□□□□□ -0.74
YSP3	YOR003W	STT4	P37297	1900 aa		10.43	□□□□□ -0.74
YSP3	YOR003W	PRP16	P15938	1071 aa	Predicted RBP	10.42	□□□□□ -0.74
YSP3	YOR003W	SPT16	P32558	1035 aa	Known RBP	10.42	□□□□□ -0.74
YSP3	YOR003W	SDH3	P33421	198 aa		10.42	□□□□□ -0.74
YSP3	YOR003W	SOL2	P37262	315 aa		10.42	□□□□□ -0.74
YSP3	YOR003W	SAP30	P38429	201 aa		10.42	□□□□□ -0.74
YSP3	YOR003W	OCA5	P38738	679 aa		10.42	□□□□□ -0.74
YSP3	YOR003W	YDR089W	P38966	869 aa		10.42	□□□□□ -0.74
YSP3	YOR003W	FAA3	P39002	694 aa		10.42	□□□□□ -0.74
YSP3	YOR003W	DHH1	P39517	506 aa	Known RBP	10.42	□□□□□ -0.74
YSP3	YOR003W	PRM2	P40534	656 aa		10.42	□□□□□ -0.74
YSP3	YOR003W	FAR3	P46671	204 aa		10.42	□□□□□ -0.74
YSP3	YOR003W	GCV1	P48015	400 aa		10.42	□□□□□ -0.74
YSP3	YOR003W	PAN2	P53010	1115 aa	Predicted RBP	10.42	□□□□□ -0.74
YSP3	YOR003W	RMI1	Q02685	241 aa		10.42	□□□□□ -0.74
YSP3	YOR003W	FAR8	Q05040	523 aa		10.42	□□□□□ -0.74
YSP3	YOR003W	HRP1	Q99383	534 aa	Known RBP	10.42	□□□□□ -0.74
YSP3	YOR003W	CLN2	P20438	545 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	YCK2	P23292	546 aa	Known RBP	10.41	□□□□□ -0.74
YSP3	YOR003W	VAC17	P25591	423 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	MCM5	P29496	775 aa	Known RBP	10.41	□□□□□ -0.74
YSP3	YOR003W	YSC84	P32793	468 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	SKT5	P34226	696 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	ARA1	P38115	344 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	YHR127W	P38833	243 aa	Known RBP	10.41	□□□□□ -0.74
YSP3	YOR003W	AXL1	P40851	1208 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	VMA13	P41807	478 aa	Known RBP	10.41	□□□□□ -0.74
YSP3	YOR003W	FET5	P43561	622 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	STB2	P46679	850 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	GCD14	P46959	383 aa	Predicted RBP	10.41	□□□□□ -0.74
YSP3	YOR003W	EGD1	Q02642	157 aa	Known RBP	10.41	□□□□□ -0.74
YSP3	YOR003W	RIF2	Q06208	395 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	SEC10	Q06245	871 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	NCA2	Q12374	616 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	NOP58	Q12499	511 aa	Known RBP	10.41	□□□□□ -0.74
YSP3	YOR003W	MET8	P15807	274 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	ART10	P18634	518 aa	Known RBP	10.41	□□□□□ -0.74
YSP3	YOR003W	CLB1	P24868	471 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	RNQ1	P25367	405 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	CWP1	P28319	239 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	MGM101	P32787	269 aa	Known RBP	10.41	□□□□□ -0.74
YSP3	YOR003W	PTH2	P34222	208 aa		10.41	□□□□□ -0.74
YSP3	YOR003W	MRPL37	P36532	105 aa		10.41	□□□□□ -0.74

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms