RNA–Protein interactions for RNA: YNL186W

UBP10, Transcript of Ubiquitin-specific protease, deubiquitinates Ub-protein moieties, yeast

Gene UBP10, Length 2,379 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP10	YNL186W	YDR089W	P38966	869 aa		4.21	□□□□□ -1.73
UBP10	YNL186W	SER3	P40054	469 aa		4.21	□□□□□ -1.73
UBP10	YNL186W	MKT1	P40850	830 aa	Known RBP	4.21	□□□□□ -1.73
UBP10	YNL186W	CHS6	P40955	746 aa		4.21	□□□□□ -1.73
UBP10	YNL186W	SWP82	P43554	623 aa		4.21	□□□□□ -1.73
UBP10	YNL186W	SMC3	P47037	1230 aa		4.21	□□□□□ -1.73
UBP10	YNL186W	CTR1	P49573	406 aa		4.21	□□□□□ -1.73
UBP10	YNL186W	FMS1	P50264	508 aa		4.21	□□□□□ -1.73
UBP10	YNL186W	INP52	P50942	1183 aa		4.21	□□□□□ -1.73
UBP10	YNL186W	RLM1	Q12224	676 aa		4.21	□□□□□ -1.73
UBP10	YNL186W	MLP1	Q02455	1875 aa	Known RBP	4.21	□□□□□ -1.74
UBP10	YNL186W	TUS1	Q06412	1307 aa		4.21	□□□□□ -1.74
UBP10	YNL186W	SEC15	P22224	910 aa		4.21	□□□□□ -1.74
UBP10	YNL186W	RFA2	P26754	273 aa	Known RBP	4.21	□□□□□ -1.74
UBP10	YNL186W	SSE1	P32589	693 aa	Known RBP	4.21	□□□□□ -1.74
UBP10	YNL186W	RML2	P32611	393 aa		4.21	□□□□□ -1.74
UBP10	YNL186W	VPS17	P32913	551 aa		4.21	□□□□□ -1.74
UBP10	YNL186W	TIF3	P34167	436 aa	Known RBP	4.21	□□□□□ -1.74
UBP10	YNL186W	ARO9	P38840	513 aa	Predicted RBP	4.21	□□□□□ -1.74
UBP10	YNL186W	BAP3	P41815	604 aa		4.21	□□□□□ -1.74
UBP10	YNL186W	HXT14	P42833	540 aa		4.21	□□□□□ -1.74
UBP10	YNL186W	RHO5	P53879	331 aa	Known RBP	4.21	□□□□□ -1.74
UBP10	YNL186W	BOP3	P53958	396 aa		4.21	□□□□□ -1.74
UBP10	YNL186W	NRG1	Q03125	231 aa		4.21	□□□□□ -1.74
UBP10	YNL186W	ATG23	Q06671	453 aa		4.21	□□□□□ -1.74
UBP10	YNL186W	PEX19	Q07418	342 aa		4.21	□□□□□ -1.74
UBP10	YNL186W	DCI1	Q08558	271 aa		4.21	□□□□□ -1.74
UBP10	YNL186W	LPX1	Q12405	387 aa	Known RBP	4.21	□□□□□ -1.74
UBP10	YNL186W	YBR255C-A	Q3E776	120 aa		4.21	□□□□□ -1.74
UBP10	YNL186W	CDC6	P09119	513 aa		4.2	□□□□□ -1.74
UBP10	YNL186W	CRM1	P30822	1084 aa	Known RBP	4.2	□□□□□ -1.74
UBP10	YNL186W	MET22	P32179	357 aa		4.2	□□□□□ -1.74
UBP10	YNL186W	SLM4	P38247	162 aa		4.2	□□□□□ -1.74
UBP10	YNL186W	YNG2	P38806	282 aa	Known RBP	4.2	□□□□□ -1.74
UBP10	YNL186W	FMO1	P38866	432 aa		4.2	□□□□□ -1.74
UBP10	YNL186W	IMD4	P50094	524 aa	Known RBP	4.2	□□□□□ -1.74
UBP10	YNL186W	ARI1	P53111	347 aa	Known RBP	4.2	□□□□□ -1.74
UBP10	YNL186W	FHN1	P53279	174 aa		4.2	□□□□□ -1.74
UBP10	YNL186W	CTK1	Q03957	528 aa	Known RBP	4.2	□□□□□ -1.74
UBP10	YNL186W	UBX3	Q12229	455 aa		4.2	□□□□□ -1.74
UBP10	YNL186W	HIS5	P07172	385 aa		4.2	□□□□□ -1.74
UBP10	YNL186W	RPL3	P14126	387 aa	Known RBP	4.2	□□□□□ -1.74
UBP10	YNL186W	PHO91	P27514	894 aa		4.2	□□□□□ -1.74
UBP10	YNL186W	AFG1	P32317	509 aa		4.2	□□□□□ -1.74
UBP10	YNL186W	YME2	P32843	850 aa		4.2	□□□□□ -1.74
UBP10	YNL186W	MRPL7	P36519	292 aa		4.2	□□□□□ -1.74
UBP10	YNL186W	ELO3	P40319	345 aa		4.2	□□□□□ -1.74
UBP10	YNL186W	AGX1	P43567	385 aa		4.2	□□□□□ -1.74
UBP10	YNL186W	APT1	P49435	187 aa	Known RBP	4.2	□□□□□ -1.74
UBP10	YNL186W	VTA1	Q06263	330 aa		4.2	□□□□□ -1.74
UBP10	YNL186W	FRE5	Q08908	694 aa		4.2	□□□□□ -1.74
UBP10	YNL186W	RPS24A	P0CX31	135 aa	Known RBP	4.19	□□□□□ -1.74
UBP10	YNL186W	RPS24B	P0CX32	135 aa	Known RBP	4.19	□□□□□ -1.74
UBP10	YNL186W	KGD1	P20967	1014 aa	Known RBP	4.19	□□□□□ -1.74
UBP10	YNL186W	PRD1	P25375	712 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	SMY1	P32364	656 aa	Known RBP	4.19	□□□□□ -1.74
UBP10	YNL186W	SRB2	P34162	210 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	LSB3	P43603	459 aa	Known RBP	4.19	□□□□□ -1.74
UBP10	YNL186W	VID30	P53076	958 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	CUE3	P53137	624 aa	Known RBP	4.19	□□□□□ -1.74
UBP10	YNL186W	GTF1	P53260	183 aa	Predicted RBP	4.19	□□□□□ -1.74
UBP10	YNL186W	ABZ2	Q03266	374 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	BUD22	Q04347	519 aa	Known RBP	4.19	□□□□□ -1.74
UBP10	YNL186W	TRM11	Q12463	433 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	HEM1	P09950	548 aa	Predicted RBP	4.19	□□□□□ -1.74
UBP10	YNL186W	IDH2	P28241	369 aa	Known RBP	4.19	□□□□□ -1.74
UBP10	YNL186W	MRPL40	P36534	297 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	SDH8	P38345	138 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	HSM3	P38348	480 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	SEC31	P38968	1273 aa	Known RBP	4.19	□□□□□ -1.74
UBP10	YNL186W	PKP1	P40530	394 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	NET1	P47035	1189 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	ECM27	P47144	725 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	YGR079W	P53249	370 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	SPC98	P53540	846 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	VTC3	Q02725	835 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	APC5	Q08683	685 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	APL5	Q08951	932 aa	Known RBP	4.19	□□□□□ -1.74
UBP10	YNL186W	HMI1	Q12039	706 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	SEC39	Q12745	709 aa		4.19	□□□□□ -1.74
UBP10	YNL186W	PDA1	P16387	420 aa	Known RBP	4.18	□□□□□ -1.74
UBP10	YNL186W	CLC1	P17891	233 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	BUD5	P25300	642 aa	Predicted RBP	4.18	□□□□□ -1.74
UBP10	YNL186W	EBP2	P36049	427 aa	Known RBP	4.18	□□□□□ -1.74
UBP10	YNL186W	MLH1	P38920	769 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	VPS45	P38932	577 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	EFM3	P47163	339 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	ERG5	P54781	538 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	CRN1	Q06440	651 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	IZH3	Q07959	543 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	FMP40	Q08968	688 aa	Predicted RBP	4.18	□□□□□ -1.74
UBP10	YNL186W	NPC2	Q12408	173 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	AUS1	Q08409	1394 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	YLR358C	O13565	187 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	HIP1	P06775	603 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	PET123	P17558	318 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	AGP2	P38090	596 aa		4.18	□□□□□ -1.74
UBP10	YNL186W	ALK1	P43633	760 aa	Known RBP	4.18	□□□□□ -1.74
UBP10	YNL186W	RPS7B	P48164	190 aa	Known RBP	4.18	□□□□□ -1.74
UBP10	YNL186W	YGR266W	P53326	701 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms