RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	DBP8	P38719	431 aa		2.66	□□□□□ -1.98
PKR1	YMR123W	MDM31	P38880	579 aa		2.66	□□□□□ -1.98
PKR1	YMR123W	AXL1	P40851	1208 aa		2.66	□□□□□ -1.98
PKR1	YMR123W	ROK1	P45818	564 aa	Predicted RBP	2.66	□□□□□ -1.98
PKR1	YMR123W	ERG26	P53199	349 aa	Known RBP	2.66	□□□□□ -1.98
PKR1	YMR123W	RPM2	Q02773	1202 aa		2.66	□□□□□ -1.98
PKR1	YMR123W	SSK1	Q07084	712 aa		2.66	□□□□□ -1.98
PKR1	YMR123W	RTT109	Q07794	436 aa		2.66	□□□□□ -1.98
PKR1	YMR123W	RIX7	Q07844	837 aa	Known RBP	2.66	□□□□□ -1.98
PKR1	YMR123W	RPS10A	Q08745	105 aa	Predicted RBP	2.66	□□□□□ -1.98
PKR1	YMR123W	LEU9	Q12166	604 aa	Known RBP	2.66	□□□□□ -1.98
PKR1	YMR123W	CPR3	P25719	182 aa		2.65	□□□□□ -1.99
PKR1	YMR123W	LOS1	P33418	1100 aa	Predicted RBP	2.65	□□□□□ -1.99
PKR1	YMR123W	RRN3	P36070	627 aa		2.65	□□□□□ -1.99
PKR1	YMR123W	SIP4	P46954	829 aa		2.65	□□□□□ -1.99
PKR1	YMR123W	YGL082W	P53155	381 aa		2.65	□□□□□ -1.99
PKR1	YMR123W	SAM50	P53969	484 aa		2.65	□□□□□ -1.99
PKR1	YMR123W	YVH1	Q02256	364 aa	Known RBP	2.65	□□□□□ -1.99
PKR1	YMR123W	RBA50	Q04418	439 aa		2.65	□□□□□ -1.99
PKR1	YMR123W	FMP45	Q07651	309 aa		2.65	□□□□□ -1.99
PKR1	YMR123W	THI20	Q08224	551 aa		2.65	□□□□□ -1.99
PKR1	YMR123W	CYB2	P00175	591 aa		2.64	□□□□□ -1.99
PKR1	YMR123W	PRP16	P15938	1071 aa	Predicted RBP	2.64	□□□□□ -1.99
PKR1	YMR123W	VMA16	P23968	213 aa		2.64	□□□□□ -1.99
PKR1	YMR123W	BUD5	P25300	642 aa	Predicted RBP	2.64	□□□□□ -1.99
PKR1	YMR123W	RPS2	P25443	254 aa	Known RBP	2.64	□□□□□ -1.99
PKR1	YMR123W	BUD14	P27637	709 aa		2.64	□□□□□ -1.99
PKR1	YMR123W	ECM15	P35195	104 aa		2.64	□□□□□ -1.99
PKR1	YMR123W	AGP2	P38090	596 aa		2.64	□□□□□ -1.99
PKR1	YMR123W	KRE9	P39005	276 aa		2.64	□□□□□ -1.99
PKR1	YMR123W	ARC1	P46672	376 aa	Known RBP	2.64	□□□□□ -1.99
PKR1	YMR123W	IKS1	P47042	667 aa		2.64	□□□□□ -1.99
PKR1	YMR123W	YMR160W	Q03823	816 aa		2.64	□□□□□ -1.99
PKR1	YMR123W	GRC3	Q07845	632 aa		2.64	□□□□□ -1.99
PKR1	YMR123W	RPL15A	P05748	204 aa	Known RBP	2.63	□□□□□ -1.99
PKR1	YMR123W	VPS17	P32913	551 aa		2.63	□□□□□ -1.99
PKR1	YMR123W	YOX1	P34161	385 aa		2.63	□□□□□ -1.99
PKR1	YMR123W	MTR2	P34232	184 aa	Known RBP	2.63	□□□□□ -1.99
PKR1	YMR123W	YKL100C	P34248	587 aa		2.63	□□□□□ -1.99
PKR1	YMR123W	ROT2	P38138	954 aa		2.63	□□□□□ -1.99
PKR1	YMR123W	YHR218W	P38899	603 aa		2.63	□□□□□ -1.99
PKR1	YMR123W	YDL186W	P48568	277 aa		2.63	□□□□□ -1.99
PKR1	YMR123W	RSM23	Q01163	450 aa		2.63	□□□□□ -1.99
PKR1	YMR123W	YML131W	Q03102	365 aa		2.63	□□□□□ -1.99
PKR1	YMR123W	ERP1	Q05359	219 aa	Known RBP	2.63	□□□□□ -1.99
PKR1	YMR123W	DIC1	Q06143	298 aa		2.63	□□□□□ -1.99
PKR1	YMR123W	ECM30	Q06673	1274 aa		2.63	□□□□□ -1.99
PKR1	YMR123W	TEN1	Q07921	160 aa		2.63	□□□□□ -1.99
PKR1	YMR123W	CDC45	Q08032	650 aa		2.63	□□□□□ -1.99
PKR1	YMR123W	PDH1	Q12428	516 aa	Known RBP	2.63	□□□□□ -1.99
PKR1	YMR123W	TCB3	Q03640	1545 aa	Known RBP	2.63	□□□□□ -1.99
PKR1	YMR123W	FUM1	P08417	488 aa	Known RBP	2.62	□□□□□ -1.99
PKR1	YMR123W	PUP3	P25451	205 aa	Known RBP	2.62	□□□□□ -1.99
PKR1	YMR123W	YNK1	P36010	153 aa	Known RBP	2.62	□□□□□ -1.99
PKR1	YMR123W	FUI1	P38196	639 aa		2.62	□□□□□ -1.99
PKR1	YMR123W	CSM2	P40465	213 aa		2.62	□□□□□ -1.99
PKR1	YMR123W	FAR3	P46671	204 aa		2.62	□□□□□ -1.99
PKR1	YMR123W	RTT101	P47050	842 aa		2.62	□□□□□ -1.99
PKR1	YMR123W	YGR127W	P53275	312 aa		2.62	□□□□□ -1.99
PKR1	YMR123W	SMM1	P53720	384 aa	Known RBP	2.62	□□□□□ -1.99
PKR1	YMR123W	CBK1	P53894	756 aa		2.62	□□□□□ -1.99
PKR1	YMR123W	RHO4	Q00246	291 aa		2.62	□□□□□ -1.99
PKR1	YMR123W	YPL014W	Q02606	381 aa		2.62	□□□□□ -1.99
PKR1	YMR123W	YMR087W	Q04299	284 aa		2.62	□□□□□ -1.99
PKR1	YMR123W	ENT4	Q07872	247 aa		2.62	□□□□□ -1.99
PKR1	YMR123W	TLG2	Q08144	397 aa		2.62	□□□□□ -1.99
PKR1	YMR123W	SDH5	Q08230	162 aa		2.62	□□□□□ -1.99
PKR1	YMR123W	TCO89	Q08921	799 aa		2.62	□□□□□ -1.99
PKR1	YMR123W	CDC24	P11433	854 aa	Predicted RBP	2.61	□□□□□ -1.99
PKR1	YMR123W	SEC62	P21825	274 aa		2.61	□□□□□ -1.99
PKR1	YMR123W	PRE8	P23639	250 aa		2.61	□□□□□ -1.99
PKR1	YMR123W	RER1	P25560	188 aa		2.61	□□□□□ -1.99
PKR1	YMR123W	SYN8	P31377	255 aa		2.61	□□□□□ -1.99
PKR1	YMR123W	NDC1	P32500	655 aa		2.61	□□□□□ -1.99
PKR1	YMR123W	SIP2	P34164	415 aa	Known RBP	2.61	□□□□□ -1.99
PKR1	YMR123W	YBL055C	P34220	418 aa	Predicted RBP	2.61	□□□□□ -1.99
PKR1	YMR123W	NUP133	P36161	1157 aa		2.61	□□□□□ -1.99
PKR1	YMR123W	YBR139W	P38109	508 aa		2.61	□□□□□ -1.99
PKR1	YMR123W	SDS24	P38314	527 aa		2.61	□□□□□ -1.99
PKR1	YMR123W	YJL213W	P40896	331 aa		2.61	□□□□□ -1.99
PKR1	YMR123W	LYS4	P49367	693 aa	Predicted RBP	2.61	□□□□□ -1.99
PKR1	YMR123W	APT1	P49435	187 aa	Known RBP	2.61	□□□□□ -1.99
PKR1	YMR123W	COS10	P52924	374 aa		2.61	□□□□□ -1.99
PKR1	YMR123W	BSC5	P53755	489 aa		2.61	□□□□□ -1.99
PKR1	YMR123W	EFM6	P53970	246 aa		2.61	□□□□□ -1.99
PKR1	YMR123W	DPB4	Q04603	196 aa	Known RBP	2.61	□□□□□ -1.99
PKR1	YMR123W	SSP2	Q08646	371 aa		2.61	□□□□□ -1.99
PKR1	YMR123W	YPL272C	Q08984	517 aa		2.61	□□□□□ -1.99
PKR1	YMR123W	SKM1	Q12469	655 aa		2.61	□□□□□ -1.99
PKR1	YMR123W	GDH1	P07262	454 aa	Known RBP	2.6	□□□□□ -1.99
PKR1	YMR123W	MTF1	P14908	341 aa	Known RBP	2.6	□□□□□ -1.99
PKR1	YMR123W	BOS1	P25385	244 aa		2.6	□□□□□ -1.99
PKR1	YMR123W	MAL33	P38157	468 aa		2.6	□□□□□ -1.99
PKR1	YMR123W	RPH1	P39956	796 aa		2.6	□□□□□ -1.99
PKR1	YMR123W	DPH1	P40487	425 aa	Known RBP	2.6	□□□□□ -1.99
PKR1	YMR123W	ALT2	P52892	507 aa		2.6	□□□□□ -1.99
PKR1	YMR123W	BOR1	P53838	576 aa		2.6	□□□□□ -1.99
PKR1	YMR123W	YSA1	Q01976	231 aa		2.6	□□□□□ -1.99
PKR1	YMR123W	MSC1	Q03104	513 aa		2.6	□□□□□ -1.99
PKR1	YMR123W	RAD30	Q04049	632 aa		2.6	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 84.7 ms