RNA–Protein interactions for RNA: YLR216C

CPR6, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeast

Gene CPR6, Length 1,116 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPR6	YLR216C	PIG1	Q06216	648 aa		4.89	□□□□□ -1.63
CPR6	YLR216C	CSR1	Q06705	408 aa	Known RBP	4.89	□□□□□ -1.63
CPR6	YLR216C	MSH5	Q12175	901 aa		4.89	□□□□□ -1.63
CPR6	YLR216C	RSF2	P46974	1380 aa		4.89	□□□□□ -1.63
CPR6	YLR216C	PET122	P10355	254 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	NUP1	P20676	1076 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	PDE1	P22434	369 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	SWI4	P25302	1093 aa	Known RBP	4.88	□□□□□ -1.63
CPR6	YLR216C	YCR051W	P25631	222 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	VPH2	P32341	215 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	ATO2	P32907	282 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	YPT53	P36019	220 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	PIM1	P36775	1133 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	FES1	P38260	290 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	EPL1	P43572	832 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	RTS3	P53289	263 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	ADE16	P54113	591 aa	Known RBP	4.88	□□□□□ -1.63
CPR6	YLR216C	URH1	Q04179	340 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	SEG1	Q04279	960 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	YML053C	Q04978	212 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	ATG17	Q06410	417 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	YLH47	Q06493	454 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	IRC3	Q06683	689 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	VAM6	Q07468	1049 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	LCB4	Q12246	624 aa		4.88	□□□□□ -1.63
CPR6	YLR216C	BI2	P03873	423 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	RPS24A	P0CX31	135 aa	Known RBP	4.87	□□□□□ -1.63
CPR6	YLR216C	RPS24B	P0CX32	135 aa	Known RBP	4.87	□□□□□ -1.63
CPR6	YLR216C	PEP3	P27801	918 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	SIP1	P32578	815 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	GCG1	P32656	232 aa	Known RBP	4.87	□□□□□ -1.63
CPR6	YLR216C	UBC6	P33296	250 aa	Predicted RBP	4.87	□□□□□ -1.63
CPR6	YLR216C	OSH3	P38713	996 aa	Known RBP	4.87	□□□□□ -1.63
CPR6	YLR216C	IMA1	P53051	589 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	HOP2	P53187	214 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	PIB2	P53191	635 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	ATP23	P53722	227 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	YNL058C	P53947	316 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	YML108W	Q03759	105 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	SXM1	Q04175	944 aa	Known RBP	4.87	□□□□□ -1.63
CPR6	YLR216C	PLM2	Q04383	521 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	YMR114C	Q04471	368 aa	Known RBP	4.87	□□□□□ -1.63
CPR6	YLR216C	SOV1	Q04748	898 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	RRP9	Q06506	573 aa	Known RBP	4.87	□□□□□ -1.63
CPR6	YLR216C	CYK3	Q07533	885 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	PSR1	Q07800	427 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	BUD7	Q08754	746 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	NEW1	Q08972	1196 aa	Known RBP	4.87	□□□□□ -1.63
CPR6	YLR216C	VIK1	Q12045	647 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	RDL1	Q12305	139 aa	Known RBP	4.87	□□□□□ -1.63
CPR6	YLR216C	YBR255C-A	Q3E776	120 aa		4.87	□□□□□ -1.63
CPR6	YLR216C	PGK1	P00560	416 aa	Known RBP	4.86	□□□□□ -1.63
CPR6	YLR216C	SNA3	P14359	133 aa		4.86	□□□□□ -1.63
CPR6	YLR216C	MSM1	P22438	575 aa		4.86	□□□□□ -1.63
CPR6	YLR216C	APN1	P22936	367 aa		4.86	□□□□□ -1.63
CPR6	YLR216C	IMP2'	P32351	346 aa		4.86	□□□□□ -1.63
CPR6	YLR216C	DBP7	P36120	742 aa	Known RBP	4.86	□□□□□ -1.63
CPR6	YLR216C	RPF2	P36160	344 aa	Known RBP	4.86	□□□□□ -1.63
CPR6	YLR216C	KTR3	P38130	404 aa	Predicted RBP	4.86	□□□□□ -1.63
CPR6	YLR216C	PUG1	P40100	303 aa		4.86	□□□□□ -1.63
CPR6	YLR216C	SAE2	P46946	345 aa		4.86	□□□□□ -1.63
CPR6	YLR216C	CUE3	P53137	624 aa	Known RBP	4.86	□□□□□ -1.63
CPR6	YLR216C	CIK1	Q01649	594 aa		4.86	□□□□□ -1.63
CPR6	YLR216C	MUB1	Q03162	620 aa		4.86	□□□□□ -1.63
CPR6	YLR216C	RIM13	Q03792	727 aa		4.86	□□□□□ -1.63
CPR6	YLR216C	GTB1	Q04924	702 aa		4.86	□□□□□ -1.63
CPR6	YLR216C	HRD3	Q05787	833 aa		4.86	□□□□□ -1.63
CPR6	YLR216C	ATG26	Q06321	1198 aa		4.86	□□□□□ -1.63
CPR6	YLR216C	CFT2	Q12102	859 aa	Predicted RBP	4.86	□□□□□ -1.63
CPR6	YLR216C	NCA2	Q12374	616 aa		4.86	□□□□□ -1.63
CPR6	YLR216C	YPR089W	O13585	888 aa		4.85	□□□□□ -1.63
CPR6	YLR216C	APA1	P16550	321 aa	Known RBP	4.85	□□□□□ -1.63
CPR6	YLR216C	FAR1	P21268	830 aa		4.85	□□□□□ -1.63
CPR6	YLR216C	RME1	P32338	300 aa	Known RBP	4.85	□□□□□ -1.63
CPR6	YLR216C	ARP2	P32381	391 aa	Known RBP	4.85	□□□□□ -1.63
CPR6	YLR216C	NUP133	P36161	1157 aa		4.85	□□□□□ -1.63
CPR6	YLR216C	FSH1	P38777	243 aa	Known RBP	4.85	□□□□□ -1.63
CPR6	YLR216C	RTS1	P38903	757 aa		4.85	□□□□□ -1.63
CPR6	YLR216C	RPT2	P40327	437 aa	Known RBP	4.85	□□□□□ -1.63
CPR6	YLR216C	SKP2	P42843	763 aa		4.85	□□□□□ -1.63
CPR6	YLR216C	STB2	P46679	850 aa		4.85	□□□□□ -1.63
CPR6	YLR216C	IMD4	P50094	524 aa	Known RBP	4.85	□□□□□ -1.63
CPR6	YLR216C	COS6	P53344	381 aa		4.85	□□□□□ -1.63
CPR6	YLR216C	PPM1	Q04081	328 aa		4.85	□□□□□ -1.63
CPR6	YLR216C	YMR111C	Q04461	462 aa	Predicted RBP	4.85	□□□□□ -1.63
CPR6	YLR216C	BSP1	Q06604	576 aa		4.85	□□□□□ -1.63
CPR6	YLR216C	NSE1	Q07913	336 aa		4.85	□□□□□ -1.63
CPR6	YLR216C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
CPR6	YLR216C	RIO1	Q12196	484 aa	Known RBP	4.85	□□□□□ -1.63
CPR6	YLR216C	Q0010	Q9ZZX9	128 aa		4.85	□□□□□ -1.63
CPR6	YLR216C	POM152	P39685	1337 aa		4.85	□□□□□ -1.63
CPR6	YLR216C	SRV2	P17555	526 aa	Known RBP	4.84	□□□□□ -1.63
CPR6	YLR216C	DPB2	P24482	689 aa	Predicted RBP	4.84	□□□□□ -1.63
CPR6	YLR216C	BMH1	P29311	267 aa	Known RBP	4.84	□□□□□ -1.63
CPR6	YLR216C	ITR2	P30606	609 aa		4.84	□□□□□ -1.63
CPR6	YLR216C	HXT1	P32465	570 aa		4.84	□□□□□ -1.63
CPR6	YLR216C	YKR015C	P36111	568 aa		4.84	□□□□□ -1.63
CPR6	YLR216C	JNM1	P36224	373 aa		4.84	□□□□□ -1.63
CPR6	YLR216C	HSM3	P38348	480 aa		4.84	□□□□□ -1.63
CPR6	YLR216C	PDS1	P40316	373 aa	Predicted RBP	4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms