RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C ORC3P54790 616 aa10.94□□□□□ -0.66
SPT8YLR055C RMI1Q02685 241 aa10.94□□□□□ -0.66
SPT8YLR055C YDL073WQ07454 984 aa10.94□□□□□ -0.66
SPT8YLR055C DAP1Q12091 152 aa10.94□□□□□ -0.66
SPT8YLR055C SVS1Q12254 260 aa10.94□□□□□ -0.66
SPT8YLR055C SAS5Q99314 248 aa10.94□□□□□ -0.66
SPT8YLR055C YMR084WA2P2R3 262 aa10.93□□□□□ -0.66
SPT8YLR055C MF(ALPHA)1P01149 165 aa10.93□□□□□ -0.66
SPT8YLR055C PET122P10355 254 aa10.93□□□□□ -0.66
SPT8YLR055C THR1P17423 357 aaKnown RBP10.93□□□□□ -0.66
SPT8YLR055C UBA1P22515 1024 aaKnown RBP10.93□□□□□ -0.66
SPT8YLR055C PHO87P25360 923 aa10.93□□□□□ -0.66
SPT8YLR055C PHO91P27514 894 aa10.93□□□□□ -0.66
SPT8YLR055C RCN1P36054 211 aa10.93□□□□□ -0.66
SPT8YLR055C YPK3P38070 525 aa10.93□□□□□ -0.66
SPT8YLR055C ECM13P38195 257 aa10.93□□□□□ -0.66
SPT8YLR055C THO1P40040 218 aaKnown RBP10.93□□□□□ -0.66
SPT8YLR055C YJL070CP40361 888 aa10.93□□□□□ -0.66
SPT8YLR055C MET18P40469 1032 aa10.93□□□□□ -0.66
SPT8YLR055C RPS10BP46784 105 aaKnown RBP10.93□□□□□ -0.66
SPT8YLR055C RTT101P47050 842 aa10.93□□□□□ -0.66
SPT8YLR055C MON1P53129 644 aa10.93□□□□□ -0.66
SPT8YLR055C YGR053CP53234 283 aa10.93□□□□□ -0.66
SPT8YLR055C LEE1Q02799 301 aaKnown RBP10.93□□□□□ -0.66
SPT8YLR055C RLI1Q03195 608 aaKnown RBP10.93□□□□□ -0.66
SPT8YLR055C RSN1Q03516 953 aa10.93□□□□□ -0.66
SPT8YLR055C YOL019WQ08157 551 aa10.93□□□□□ -0.66
SPT8YLR055C RPS10AQ08745 105 aaPredicted RBP10.93□□□□□ -0.66
SPT8YLR055C LCB4Q12246 624 aa10.93□□□□□ -0.66
SPT8YLR055C GLN4P13188 809 aaKnown RBP10.93□□□□□ -0.66
SPT8YLR055C DBR1P24309 405 aaKnown RBP10.93□□□□□ -0.66
SPT8YLR055C DMC1P25453 334 aa10.93□□□□□ -0.66
SPT8YLR055C NUP2P32499 720 aa10.93□□□□□ -0.66
SPT8YLR055C VRP1P37370 817 aa10.93□□□□□ -0.66
SPT8YLR055C YHL012WP38709 493 aa10.93□□□□□ -0.66
SPT8YLR055C FAD1P38913 306 aa10.93□□□□□ -0.66
SPT8YLR055C PRM9P39551 298 aa10.93□□□□□ -0.66
SPT8YLR055C YJR154WP47181 346 aa10.93□□□□□ -0.66
SPT8YLR055C COP1P53622 1201 aaKnown RBP10.93□□□□□ -0.66
SPT8YLR055C PLP1Q04004 230 aa10.93□□□□□ -0.66
SPT8YLR055C NTG2Q08214 380 aa10.93□□□□□ -0.66
SPT8YLR055C SOG2Q08817 791 aa10.93□□□□□ -0.66
SPT8YLR055C HUA2Q12134 243 aa10.93□□□□□ -0.66
SPT8YLR055C GPR1Q12361 961 aa10.93□□□□□ -0.66
SPT8YLR055C CBS2P14905 389 aa10.92□□□□□ -0.66
SPT8YLR055C PHO81P17442 1178 aa10.92□□□□□ -0.66
SPT8YLR055C RAM1P22007 431 aa10.92□□□□□ -0.66
SPT8YLR055C BUB2P26448 306 aaPredicted RBP10.92□□□□□ -0.66
SPT8YLR055C ISF1P32488 338 aa10.92□□□□□ -0.66
SPT8YLR055C DOM34P33309 386 aa10.92□□□□□ -0.66
SPT8YLR055C COA1P40452 197 aa10.92□□□□□ -0.66
SPT8YLR055C UFE1P41834 346 aa10.92□□□□□ -0.66
SPT8YLR055C LSB6P42951 607 aa10.92□□□□□ -0.66
SPT8YLR055C CRN1Q06440 651 aa10.92□□□□□ -0.66
SPT8YLR055C FMP45Q07651 309 aa10.92□□□□□ -0.66
SPT8YLR055C YLR125WQ12138 136 aa10.92□□□□□ -0.66
SPT8YLR055C PUF2Q12221 1075 aaKnown RBP RIP-Chip data10.92□□□□□ -0.66 RIP-Chip
SPT8YLR055C RPN13O13563 156 aa10.91□□□□□ -0.66
SPT8YLR055C MET16P18408 261 aaPredicted RBP10.91□□□□□ -0.66
SPT8YLR055C TRX2P22803 104 aaKnown RBP10.91□□□□□ -0.66
SPT8YLR055C PPH22P23595 377 aa10.91□□□□□ -0.66
SPT8YLR055C UBC8P28263 218 aa10.91□□□□□ -0.66
SPT8YLR055C SPC34P36131 295 aa10.91□□□□□ -0.66
SPT8YLR055C ROT2P38138 954 aa10.91□□□□□ -0.66
SPT8YLR055C FSH1P38777 243 aaKnown RBP10.91□□□□□ -0.66
SPT8YLR055C EGD2P38879 174 aaKnown RBP10.91□□□□□ -0.66
SPT8YLR055C MNN1P39106 762 aa10.91□□□□□ -0.66
SPT8YLR055C GIP4P39732 760 aa10.91□□□□□ -0.66
SPT8YLR055C YEL028WP39989 153 aa10.91□□□□□ -0.66
SPT8YLR055C CNN1P43618 361 aa10.91□□□□□ -0.66
SPT8YLR055C GUS1P46655 708 aaKnown RBP RIP-Chip data10.91□□□□□ -0.66not detected
SPT8YLR055C NRD1P53617 575 aaKnown RBP RIP-Chip data10.91□□□□□ -0.66not detected
SPT8YLR055C PIR3Q03180 325 aa10.91□□□□□ -0.66
SPT8YLR055C GAS3Q03655 524 aa10.91□□□□□ -0.66
SPT8YLR055C ARA2Q04212 335 aa10.91□□□□□ -0.66
SPT8YLR055C RSA1Q08932 381 aa10.91□□□□□ -0.66
SPT8YLR055C UBX3Q12229 455 aa10.91□□□□□ -0.66
SPT8YLR055C SUC2P00724 532 aa10.91□□□□□ -0.66
SPT8YLR055C TPK3P05986 398 aa10.91□□□□□ -0.66
SPT8YLR055C YSP3P25036 478 aa10.91□□□□□ -0.66
SPT8YLR055C BEM1P29366 551 aa10.91□□□□□ -0.66
SPT8YLR055C URA8P38627 578 aaPredicted RBP10.91□□□□□ -0.66
SPT8YLR055C SWD1P39706 426 aa10.91□□□□□ -0.66
SPT8YLR055C KRE29P40026 464 aa10.91□□□□□ -0.66
SPT8YLR055C YEN1P40028 759 aa10.91□□□□□ -0.66
SPT8YLR055C YIL161WP40449 235 aaKnown RBP10.91□□□□□ -0.66
SPT8YLR055C MPS3P47069 682 aa10.91□□□□□ -0.66
SPT8YLR055C GTR2P53290 341 aa10.91□□□□□ -0.66
SPT8YLR055C COQ6P53318 479 aa10.91□□□□□ -0.66
SPT8YLR055C ESF2P53743 316 aaKnown RBP10.91□□□□□ -0.66
SPT8YLR055C TRS31Q03337 283 aa10.91□□□□□ -0.66
SPT8YLR055C PML39Q03760 334 aa10.91□□□□□ -0.66
SPT8YLR055C PEX12Q04370 399 aa10.91□□□□□ -0.66
SPT8YLR055C UIP4Q08926 304 aa10.91□□□□□ -0.66
SPT8YLR055C SLF1Q12034 447 aaKnown RBP10.91□□□□□ -0.66
SPT8YLR055C CCH1P50077 2039 aa10.9□□□□□ -0.66
SPT8YLR055C THP2O13539 261 aaKnown RBP10.9□□□□□ -0.66
SPT8YLR055C CBP2P03874 630 aaPredicted RBP10.9□□□□□ -0.66
SPT8YLR055C MET17P06106 444 aa10.9□□□□□ -0.66
SPT8YLR055C MIS1P09440 975 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms