RNA–Protein interactions for RNA: YKL146W

AVT3, Transcript of Vacuolar transporter, yeast

Gene AVT3, Length 2,079 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT3	YKL146W	MPD2	Q99316	277 aa		5.09	□□□□□ -1.59
AVT3	YKL146W	SEC63	P14906	663 aa		5.09	□□□□□ -1.59
AVT3	YKL146W	ARP1	P38696	384 aa		5.09	□□□□□ -1.59
AVT3	YKL146W	PCL5	P38794	229 aa		5.09	□□□□□ -1.59
AVT3	YKL146W	YIR007W	P40566	764 aa		5.09	□□□□□ -1.59
AVT3	YKL146W	VMA13	P41807	478 aa	Known RBP	5.09	□□□□□ -1.59
AVT3	YKL146W	YRB1	P41920	201 aa	Known RBP	5.09	□□□□□ -1.59
AVT3	YKL146W	EFM5	P53200	248 aa	Known RBP	5.09	□□□□□ -1.59
AVT3	YKL146W	YGR053C	P53234	283 aa		5.09	□□□□□ -1.59
AVT3	YKL146W	FRE4	P53746	719 aa		5.09	□□□□□ -1.59
AVT3	YKL146W	SLM2	P53955	656 aa		5.09	□□□□□ -1.59
AVT3	YKL146W	PEX13	P80667	386 aa		5.09	□□□□□ -1.59
AVT3	YKL146W	NAN1	Q02931	896 aa	Known RBP	5.09	□□□□□ -1.59
AVT3	YKL146W	RCO1	Q04779	684 aa		5.09	□□□□□ -1.59
AVT3	YKL146W	GTB1	Q04924	702 aa		5.09	□□□□□ -1.59
AVT3	YKL146W	UPC2	Q12151	913 aa		5.09	□□□□□ -1.59
AVT3	YKL146W	CET1	O13297	549 aa	Predicted RBP	5.08	□□□□□ -1.6
AVT3	YKL146W	FUS1	P11710	512 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	VAN1	P23642	535 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	YKL069W	P36088	180 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	VRP1	P37370	817 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	COA1	P40452	197 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	TIM54	P47045	478 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	TYW3	P53177	273 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	SWC4	P53201	476 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	NMA2	P53204	395 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	CWC24	P53769	259 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	IBD2	P53892	351 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	NSE1	Q07913	336 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	IRC10	Q08118	586 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	YOR012W	Q12351	137 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	GTT2	Q12390	233 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	NHA1	Q99271	985 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	RPS9A	O13516	197 aa	Known RBP	5.08	□□□□□ -1.6
AVT3	YKL146W	CAR1	P00812	333 aa	Known RBP	5.08	□□□□□ -1.6
AVT3	YKL146W	PWP1	P21304	576 aa	Known RBP	5.08	□□□□□ -1.6
AVT3	YKL146W	MLS1	P30952	554 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	SPR1	P32603	445 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	DUT1	P33317	147 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	MTC2	P34246	357 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	THI80	P35202	319 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	FZO1	P38297	855 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	RIM11	P38615	370 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	YHL008C	P38750	627 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
AVT3	YKL146W	SCS2	P40075	244 aa	Known RBP	5.08	□□□□□ -1.6
AVT3	YKL146W	SER33	P40510	469 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	SET2	P46995	733 aa	Known RBP	5.08	□□□□□ -1.6
AVT3	YKL146W	USE1	P53146	245 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	GTR2	P53290	341 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	NOP19	P53317	196 aa	Predicted RBP	5.08	□□□□□ -1.6
AVT3	YKL146W	YNR061C	P53747	219 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	CUS2	P53830	285 aa	Predicted RBP	5.08	□□□□□ -1.6
AVT3	YKL146W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.08	□□□□□ -1.6	not detected
AVT3	YKL146W	SSL1	Q04673	461 aa	Predicted RBP	5.08	□□□□□ -1.6
AVT3	YKL146W	YPR084W	Q06821	456 aa		5.08	□□□□□ -1.6
AVT3	YKL146W	TMA7	Q3E764	64 aa	Known RBP	5.08	□□□□□ -1.6
AVT3	YKL146W	FAB1	P34756	2278 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	CPA1	P07258	411 aa	Known RBP	5.07	□□□□□ -1.6
AVT3	YKL146W	PRP6	P19735	899 aa	Predicted RBP	5.07	□□□□□ -1.6
AVT3	YKL146W	EPT1	P22140	391 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	RAD14	P28519	371 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	TIP20	P33891	701 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	SIP2	P34164	415 aa	Known RBP	5.07	□□□□□ -1.6
AVT3	YKL146W	NUP120	P35729	1037 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	CUE2	P36075	443 aa	Known RBP	5.07	□□□□□ -1.6
AVT3	YKL146W	DBP8	P38719	431 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	YHR045W	P38775	560 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	TIM17	P39515	158 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	DHH1	P39517	506 aa	Known RBP	5.07	□□□□□ -1.6
AVT3	YKL146W	GDH3	P39708	457 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	RSP5	P39940	809 aa	Known RBP	5.07	□□□□□ -1.6
AVT3	YKL146W	MEP1	P40260	492 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	CCT7	P42943	550 aa	Known RBP	5.07	□□□□□ -1.6
AVT3	YKL146W	YNL010W	P53981	241 aa	Known RBP	5.07	□□□□□ -1.6
AVT3	YKL146W	REX2	P54964	269 aa	Known RBP	5.07	□□□□□ -1.6
AVT3	YKL146W	CCE1	Q03702	353 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	RIF2	Q06208	395 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	RSC3	Q06639	885 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	HBT1	Q07653	1046 aa	Known RBP	5.07	□□□□□ -1.6
AVT3	YKL146W	YOL019W	Q08157	551 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	NTG2	Q08214	380 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	DIA2	Q08496	732 aa	Predicted RBP	5.07	□□□□□ -1.6
AVT3	YKL146W	OSW1	Q08692	278 aa		5.07	□□□□□ -1.6
AVT3	YKL146W	SMF3	Q12078	473 aa	Predicted RBP	5.07	□□□□□ -1.6
AVT3	YKL146W	AHA1	Q12449	350 aa	Known RBP	5.07	□□□□□ -1.6
AVT3	YKL146W	CDC34	P14682	295 aa		5.06	□□□□□ -1.6
AVT3	YKL146W	CSE1	P33307	960 aa		5.06	□□□□□ -1.6
AVT3	YKL146W	PMT1	P33775	817 aa		5.06	□□□□□ -1.6
AVT3	YKL146W	YKL100C	P34248	587 aa		5.06	□□□□□ -1.6
AVT3	YKL146W	LRG1	P35688	1017 aa		5.06	□□□□□ -1.6
AVT3	YKL146W	SSN3	P39073	555 aa		5.06	□□□□□ -1.6
AVT3	YKL146W	RLP7	P40693	322 aa	Known RBP	5.06	□□□□□ -1.6
AVT3	YKL146W	TRM12	Q04235	462 aa		5.06	□□□□□ -1.6
AVT3	YKL146W	VAM6	Q07468	1049 aa		5.06	□□□□□ -1.6
AVT3	YKL146W	OPI10	Q08202	246 aa		5.06	□□□□□ -1.6
AVT3	YKL146W	MCD1	Q12158	566 aa		5.06	□□□□□ -1.6
AVT3	YKL146W	ATG34	Q12292	412 aa		5.06	□□□□□ -1.6
AVT3	YKL146W	TRP3	P00937	484 aa		5.06	□□□□□ -1.6
AVT3	YKL146W	RSR1	P13856	272 aa		5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms