RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTK1	YKL139W	TKL1	P23254	680 aa	Known RBP	4.12	□□□□□ -1.75
CTK1	YKL139W	BOS1	P25385	244 aa		4.12	□□□□□ -1.75
CTK1	YKL139W	GSY2	P27472	705 aa		4.12	□□□□□ -1.75
CTK1	YKL139W	YME1	P32795	747 aa		4.12	□□□□□ -1.75
CTK1	YKL139W	ANS1	P38832	159 aa		4.12	□□□□□ -1.75
CTK1	YKL139W	DLD2	P46681	530 aa	Known RBP	4.12	□□□□□ -1.75
CTK1	YKL139W	VPS9	P54787	451 aa		4.12	□□□□□ -1.75
CTK1	YKL139W	GYL1	Q04322	720 aa		4.12	□□□□□ -1.75
CTK1	YKL139W	RBS1	Q05672	457 aa	Known RBP	4.12	□□□□□ -1.75
CTK1	YKL139W	FMP45	Q07651	309 aa		4.12	□□□□□ -1.75
CTK1	YKL139W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
CTK1	YKL139W	RDL1	Q12305	139 aa	Known RBP	4.12	□□□□□ -1.75
CTK1	YKL139W	PAR32	Q12515	295 aa	Known RBP	4.12	□□□□□ -1.75
CTK1	YKL139W	YCR006C	P25350	157 aa		4.11	□□□□□ -1.75
CTK1	YKL139W	BUD14	P27637	709 aa		4.11	□□□□□ -1.75
CTK1	YKL139W	ERV1	P27882	189 aa		4.11	□□□□□ -1.75
CTK1	YKL139W	MSS51	P32335	436 aa		4.11	□□□□□ -1.75
CTK1	YKL139W	RXT2	P38255	430 aa		4.11	□□□□□ -1.75
CTK1	YKL139W	DBP8	P38719	431 aa		4.11	□□□□□ -1.75
CTK1	YKL139W	LCB2	P40970	561 aa		4.11	□□□□□ -1.75
CTK1	YKL139W	CIN1	P40987	1014 aa		4.11	□□□□□ -1.75
CTK1	YKL139W	STB2	P46679	850 aa		4.11	□□□□□ -1.75
CTK1	YKL139W	YTP1	P53584	459 aa		4.11	□□□□□ -1.75
CTK1	YKL139W	YMR178W	Q03219	274 aa	Known RBP	4.11	□□□□□ -1.75
CTK1	YKL139W	PDS5	Q04264	1277 aa		4.11	□□□□□ -1.75
CTK1	YKL139W	EMI2	Q04409	500 aa	Known RBP	4.11	□□□□□ -1.75
CTK1	YKL139W	IRC10	Q08118	586 aa		4.11	□□□□□ -1.75
CTK1	YKL139W	SUT2	Q12286	268 aa		4.11	□□□□□ -1.75
CTK1	YKL139W	SPT7	P35177	1332 aa		4.11	□□□□□ -1.75
CTK1	YKL139W	GPA1	P08539	472 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	SPO11	P23179	398 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	SAC1	P32368	623 aa	Known RBP	4.1	□□□□□ -1.75
CTK1	YKL139W	HXT3	P32466	567 aa	Known RBP	4.1	□□□□□ -1.75
CTK1	YKL139W	MDL1	P33310	695 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	MSR1	P38714	643 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	TCB2	P48231	1178 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	MNP1	P53163	194 aa	Predicted RBP	4.1	□□□□□ -1.75
CTK1	YKL139W	ERG26	P53199	349 aa	Known RBP	4.1	□□□□□ -1.75
CTK1	YKL139W	OAZ1	Q02803	292 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	FMP30	Q02883	468 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	COQ9	Q05779	260 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	ECM30	Q06673	1274 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	RPS10A	Q08745	105 aa	Predicted RBP	4.1	□□□□□ -1.75
CTK1	YKL139W	PDH1	Q12428	516 aa	Known RBP	4.1	□□□□□ -1.75
CTK1	YKL139W	YDL007C-A	Q2V2Q0	85 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
CTK1	YKL139W	ELO2	P25358	347 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	TFB1	P32776	642 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	PXL1	P36166	706 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	RPL32	P38061	130 aa	Known RBP	4.1	□□□□□ -1.75
CTK1	YKL139W	PAC2	P39937	518 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	GDI1	P39958	451 aa	Known RBP	4.1	□□□□□ -1.75
CTK1	YKL139W	YIL166C	P40445	542 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	ORC5	P50874	479 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	YGR016W	P53209	190 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	CAF130	P53280	1122 aa	Predicted RBP	4.1	□□□□□ -1.75
CTK1	YKL139W	APM1	Q00776	475 aa	Predicted RBP	4.1	□□□□□ -1.75
CTK1	YKL139W	MSC1	Q03104	513 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	SNU56	Q03782	492 aa	Known RBP	4.1	□□□□□ -1.75
CTK1	YKL139W	VTA1	Q06263	330 aa		4.1	□□□□□ -1.75
CTK1	YKL139W	BUD5	P25300	642 aa	Predicted RBP	4.09	□□□□□ -1.75
CTK1	YKL139W	YKL100C	P34248	587 aa		4.09	□□□□□ -1.75
CTK1	YKL139W	RPS10B	P46784	105 aa	Known RBP	4.09	□□□□□ -1.75
CTK1	YKL139W	RSM23	Q01163	450 aa		4.09	□□□□□ -1.75
CTK1	YKL139W	KAP120	Q02932	1032 aa		4.09	□□□□□ -1.75
CTK1	YKL139W	SOV1	Q04748	898 aa		4.09	□□□□□ -1.75
CTK1	YKL139W	PDR8	Q06149	701 aa		4.09	□□□□□ -1.75
CTK1	YKL139W	IRC3	Q06683	689 aa		4.09	□□□□□ -1.75
CTK1	YKL139W	ETT1	Q08421	412 aa	Known RBP	4.09	□□□□□ -1.75
CTK1	YKL139W	PNS1	Q12412	539 aa		4.09	□□□□□ -1.75
CTK1	YKL139W	ARG81	P05085	880 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	CLC1	P17891	233 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	CPR2	P23285	205 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	PPH22	P23595	377 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	CLB2	P24869	491 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	HCS1	P34243	683 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	OCT1	P35999	772 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	APD1	P38281	316 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	CAJ1	P39101	391 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	CIN4	P39110	191 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	SEC28	P40509	296 aa	Known RBP	4.08	□□□□□ -1.76
CTK1	YKL139W	VMA13	P41807	478 aa	Known RBP	4.08	□□□□□ -1.76
CTK1	YKL139W	STU2	P46675	888 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	YJL055W	P47044	245 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	BSP1	Q06604	576 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	MCH4	Q08268	501 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	GPM3	Q12326	303 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	YLR111W	Q12528	110 aa		4.08	□□□□□ -1.76
CTK1	YKL139W	NUP1	P20676	1076 aa		4.07	□□□□□ -1.76
CTK1	YKL139W	SNT1	P25357	1226 aa		4.07	□□□□□ -1.76
CTK1	YKL139W	RRP7	P25368	297 aa	Predicted RBP	4.07	□□□□□ -1.76
CTK1	YKL139W	RML2	P32611	393 aa		4.07	□□□□□ -1.76
CTK1	YKL139W	YME2	P32843	850 aa		4.07	□□□□□ -1.76
CTK1	YKL139W	TUL1	P36096	758 aa		4.07	□□□□□ -1.76
CTK1	YKL139W	ARP1	P38696	384 aa		4.07	□□□□□ -1.76
CTK1	YKL139W	CAK1	P43568	368 aa	Predicted RBP	4.07	□□□□□ -1.76
CTK1	YKL139W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
CTK1	YKL139W	TAX4	P47030	604 aa		4.07	□□□□□ -1.76
CTK1	YKL139W	ASI1	P54074	624 aa		4.07	□□□□□ -1.76
CTK1	YKL139W	TAP42	Q04372	366 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms