RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C SUR1P33300 382 aa3.27□□□□□ -1.89
YIR040CYIR040C OCT1P35999 772 aa3.27□□□□□ -1.89
YIR040CYIR040C DAD2P36162 133 aa3.27□□□□□ -1.89
YIR040CYIR040C BMT2P38278 337 aa3.27□□□□□ -1.89
YIR040CYIR040C GDT1P38301 280 aaPredicted RBP3.27□□□□□ -1.89
YIR040CYIR040C YHR182WP38870 785 aa3.27□□□□□ -1.89
YIR040CYIR040C YDR089WP38966 869 aa3.27□□□□□ -1.89
YIR040CYIR040C NUP60P39705 539 aa3.27□□□□□ -1.89
YIR040CYIR040C SEN34P39707 275 aa3.27□□□□□ -1.89
YIR040CYIR040C EDC3P39998 551 aaKnown RBP3.27□□□□□ -1.89
YIR040CYIR040C PIG2P40187 538 aa3.27□□□□□ -1.89
YIR040CYIR040C MSS2P40990 351 aa3.27□□□□□ -1.89
YIR040CYIR040C MTR3P48240 250 aaPredicted RBP3.27□□□□□ -1.89
YIR040CYIR040C YGL117WP53133 265 aa3.27□□□□□ -1.89
YIR040CYIR040C SOL4P53315 255 aa3.27□□□□□ -1.89
YIR040CYIR040C MPP6P53725 186 aaPredicted RBP3.27□□□□□ -1.89
YIR040CYIR040C BSC5P53755 489 aa3.27□□□□□ -1.89
YIR040CYIR040C SMA1Q02651 245 aa3.27□□□□□ -1.89
YIR040CYIR040C YPL107WQ02873 248 aa3.27□□□□□ -1.89
YIR040CYIR040C YMR155WQ03795 547 aa3.27□□□□□ -1.89
YIR040CYIR040C PEX12Q04370 399 aa3.27□□□□□ -1.89
YIR040CYIR040C ARG7Q04728 441 aa3.27□□□□□ -1.89
YIR040CYIR040C ADY4Q05955 493 aa3.27□□□□□ -1.89
YIR040CYIR040C YLR345WQ06137 509 aa3.27□□□□□ -1.89
YIR040CYIR040C BOP2Q06150 570 aa3.27□□□□□ -1.89
YIR040CYIR040C OMS1Q06668 471 aa3.27□□□□□ -1.89
YIR040CYIR040C YFT2Q06676 274 aa3.27□□□□□ -1.89
YIR040CYIR040C DIS3Q08162 1001 aaKnown RBP3.27□□□□□ -1.89
YIR040CYIR040C SIL1Q08199 421 aa3.27□□□□□ -1.89
YIR040CYIR040C TY3A-GQ12173 290 aa3.27□□□□□ -1.89
YIR040CYIR040C MSH5Q12175 901 aa3.27□□□□□ -1.89
YIR040CYIR040C HER1Q12276 1246 aa3.27□□□□□ -1.89
YIR040CYIR040C HMS1Q12398 434 aa3.27□□□□□ -1.89
YIR040CYIR040C PDH1Q12428 516 aaKnown RBP3.27□□□□□ -1.89
YIR040CYIR040C ATG11Q12527 1178 aa3.27□□□□□ -1.89
YIR040CYIR040C PGA3Q12746 312 aaKnown RBP3.27□□□□□ -1.89
YIR040CYIR040C TY3A-IQ99219 290 aa3.27□□□□□ -1.89
YIR040CYIR040C TRM3Q07527 1436 aa3.27□□□□□ -1.89
YIR040CYIR040C NUP157P40064 1391 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C ARG3P05150 338 aa3.26□□□□□ -1.89
YIR040CYIR040C PDE2P06776 526 aa3.26□□□□□ -1.89
YIR040CYIR040C RAD7P06779 565 aa3.26□□□□□ -1.89
YIR040CYIR040C SPT3P06844 337 aa3.26□□□□□ -1.89
YIR040CYIR040C FUM1P08417 488 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C SSA3P09435 649 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C DSF1P0CX08 502 aa3.26□□□□□ -1.89
YIR040CYIR040C YNR073CP0CX09 502 aa3.26□□□□□ -1.89
YIR040CYIR040C SAM1P10659 382 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C STE12P13574 688 aa3.26□□□□□ -1.89
YIR040CYIR040C FBA1P14540 359 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C CKA1P15790 372 aa3.26□□□□□ -1.89
YIR040CYIR040C CDC23P16522 626 aa3.26□□□□□ -1.89
YIR040CYIR040C TUP1P16649 713 aa3.26□□□□□ -1.89
YIR040CYIR040C ALG1P16661 449 aa3.26□□□□□ -1.89
YIR040CYIR040C THR1P17423 357 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C KGD2P19262 463 aaPredicted RBP3.26□□□□□ -1.89
YIR040CYIR040C RNR1P21524 888 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C GID7P25569 745 aa3.26□□□□□ -1.89
YIR040CYIR040C CRM1P30822 1084 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C ERG1P32476 496 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C PRP19P32523 503 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C APE3P37302 537 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C RFC3P38629 340 aa3.26□□□□□ -1.89
YIR040CYIR040C GND1P38720 489 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C YHI9P38765 294 aa3.26□□□□□ -1.89
YIR040CYIR040C PPE1P38796 400 aa3.26□□□□□ -1.89
YIR040CYIR040C SOP4P39543 234 aaPredicted RBP3.26□□□□□ -1.89
YIR040CYIR040C GPP2P40106 250 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C RTS2P40962 232 aa3.26□□□□□ -1.89
YIR040CYIR040C LYS14P40971 790 aa3.26□□□□□ -1.89
YIR040CYIR040C ELP2P42935 788 aa3.26□□□□□ -1.89
YIR040CYIR040C STB2P46679 850 aa3.26□□□□□ -1.89
YIR040CYIR040C MNN11P46985 422 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C NET1P47035 1189 aa3.26□□□□□ -1.89
YIR040CYIR040C EMC2P47133 292 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C ILM1P47155 203 aa3.26□□□□□ -1.89
YIR040CYIR040C GTO1P48239 356 aa3.26□□□□□ -1.89
YIR040CYIR040C RMR1P53060 241 aa3.26□□□□□ -1.89
YIR040CYIR040C YGL204CP53089 101 aa3.26□□□□□ -1.89
YIR040CYIR040C NSA1P53136 463 aaPredicted RBP3.26□□□□□ -1.89
YIR040CYIR040C ART5P53244 586 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C YNR068CP53754 272 aa3.26□□□□□ -1.89
YIR040CYIR040C TEX1P53851 422 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C CBK1P53894 756 aa3.26□□□□□ -1.89
YIR040CYIR040C SAM50P53969 484 aa3.26□□□□□ -1.89
YIR040CYIR040C PRO2P54885 456 aaKnown RBP3.26□□□□□ -1.89
YIR040CYIR040C BET4Q00618 327 aa3.26□□□□□ -1.89
YIR040CYIR040C REC102Q02721 264 aa3.26□□□□□ -1.89
YIR040CYIR040C TAF12Q03761 539 aa3.26□□□□□ -1.89
YIR040CYIR040C VPS64Q03944 604 aa3.26□□□□□ -1.89
YIR040CYIR040C ECM18Q04623 453 aa3.26□□□□□ -1.89
YIR040CYIR040C ECM38Q05902 660 aaPredicted RBP3.26□□□□□ -1.89
YIR040CYIR040C BLS1Q06071 122 aa3.26□□□□□ -1.89
YIR040CYIR040C YLR413WQ06689 675 aa3.26□□□□□ -1.89
YIR040CYIR040C DIB1Q06819 143 aaPredicted RBP3.26□□□□□ -1.89
YIR040CYIR040C YDL144CQ07589 356 aa3.26□□□□□ -1.89
YIR040CYIR040C SMC5Q08204 1093 aa3.26□□□□□ -1.89
YIR040CYIR040C ARP6Q12509 438 aa3.26□□□□□ -1.89
YIR040CYIR040C PCD1Q12524 340 aa3.26□□□□□ -1.89
YIR040CYIR040C MTR10Q99189 972 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 92.7 ms