RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W GCY1P14065 312 aaKnown RBP RIP-Chip data9.98□□□□□ -0.81not detected
UBA4YHR111W CDC13P32797 924 aaKnown RBP9.98□□□□□ -0.81
UBA4YHR111W DOM34P33309 386 aa9.98□□□□□ -0.81
UBA4YHR111W REV7P38927 245 aa9.98□□□□□ -0.81
UBA4YHR111W SPF1P39986 1215 aaKnown RBP9.98□□□□□ -0.81
UBA4YHR111W CLD1P53264 445 aa9.98□□□□□ -0.81
UBA4YHR111W GOT1Q03554 138 aa9.98□□□□□ -0.81
UBA4YHR111W CTK1Q03957 528 aaKnown RBP9.98□□□□□ -0.81
UBA4YHR111W SLP1Q12232 587 aa9.98□□□□□ -0.81
UBA4YHR111W YDR061WQ12298 539 aa9.98□□□□□ -0.81
UBA4YHR111W PST1Q12355 444 aa9.98□□□□□ -0.81
UBA4YHR111W YIL046W-AQ3E7Z4 54 aa9.98□□□□□ -0.81
UBA4YHR111W HRP1Q99383 534 aaKnown RBP9.98□□□□□ -0.81
UBA4YHR111W CLB1P24868 471 aa9.97□□□□□ -0.81
UBA4YHR111W PTM1P32857 523 aa9.97□□□□□ -0.81
UBA4YHR111W RRP14P36080 434 aaKnown RBP9.97□□□□□ -0.81
UBA4YHR111W YHR033WP38690 423 aa9.97□□□□□ -0.81
UBA4YHR111W LYS1P38998 373 aaRIP-Chip data9.97□□□□□ -0.81not detected
UBA4YHR111W LRO1P40345 661 aa9.97□□□□□ -0.81
UBA4YHR111W LSC1P53598 329 aaKnown RBP9.97□□□□□ -0.81
UBA4YHR111W ARE2P53629 642 aaKnown RBP9.97□□□□□ -0.81
UBA4YHR111W BIO4P53630 237 aa9.97□□□□□ -0.81
UBA4YHR111W AAT1Q01802 451 aa9.97□□□□□ -0.81
UBA4YHR111W NHP10Q03435 203 aa9.97□□□□□ -0.81
UBA4YHR111W YMR209CQ03648 457 aa9.97□□□□□ -0.81
UBA4YHR111W TAF12Q03761 539 aa9.97□□□□□ -0.81
UBA4YHR111W CSN9Q03981 162 aa9.97□□□□□ -0.81
UBA4YHR111W HPT1Q04178 221 aaKnown RBP9.97□□□□□ -0.81
UBA4YHR111W SPO20Q04359 397 aa9.97□□□□□ -0.81
UBA4YHR111W ARG4P04076 463 aaPredicted RBP9.96□□□□□ -0.82
UBA4YHR111W CDC21P06785 304 aa9.96□□□□□ -0.82
UBA4YHR111W MET8P15807 274 aa9.96□□□□□ -0.82
UBA4YHR111W RPB4P20433 221 aaPredicted RBP9.96□□□□□ -0.82
UBA4YHR111W CLN2P20438 545 aa9.96□□□□□ -0.82
UBA4YHR111W YHR127WP38833 243 aaKnown RBP9.96□□□□□ -0.82
UBA4YHR111W YJL206CP39529 758 aa9.96□□□□□ -0.82
UBA4YHR111W PEP8P40335 379 aa9.96□□□□□ -0.82
UBA4YHR111W CFD1P40558 293 aa9.96□□□□□ -0.82
UBA4YHR111W GCD14P46959 383 aaPredicted RBP9.96□□□□□ -0.82
UBA4YHR111W TIS11P47977 285 aa9.96□□□□□ -0.82
UBA4YHR111W MPS2P53159 387 aa9.96□□□□□ -0.82
UBA4YHR111W USA1Q03714 838 aa9.96□□□□□ -0.82
UBA4YHR111W TAF11Q04226 346 aa9.96□□□□□ -0.82
UBA4YHR111W CHS5Q12114 671 aaKnown RBP9.96□□□□□ -0.82
UBA4YHR111W MCD1Q12158 566 aa9.96□□□□□ -0.82
UBA4YHR111W SUL2Q12325 893 aa9.96□□□□□ -0.82
UBA4YHR111W RRP12Q12754 1228 aaKnown RBP9.96□□□□□ -0.82
UBA4YHR111W CSF1Q12150 2958 aa9.95□□□□□ -0.82
UBA4YHR111W PRP16P15938 1071 aaPredicted RBP9.95□□□□□ -0.82
UBA4YHR111W DAL82P21705 255 aa9.95□□□□□ -0.82
UBA4YHR111W ILV6P25605 309 aaKnown RBP9.95□□□□□ -0.82
UBA4YHR111W AAD3P25612 363 aa9.95□□□□□ -0.82
UBA4YHR111W PET309P32522 965 aaPredicted RBP9.95□□□□□ -0.82
UBA4YHR111W NRP1P32770 719 aaKnown RBP RIP-Chip data9.95□□□□□ -0.82not detected
UBA4YHR111W MGM101P32787 269 aaKnown RBP9.95□□□□□ -0.82
UBA4YHR111W EMC3P36039 253 aa9.95□□□□□ -0.82
UBA4YHR111W SOL2P37262 315 aa9.95□□□□□ -0.82
UBA4YHR111W GIC1P38785 314 aa9.95□□□□□ -0.82
UBA4YHR111W TFG1P41895 735 aaPredicted RBP9.95□□□□□ -0.82
UBA4YHR111W GCV1P48015 400 aa9.95□□□□□ -0.82
UBA4YHR111W COS12P53053 380 aa9.95□□□□□ -0.82
UBA4YHR111W SGF73P53165 657 aa9.95□□□□□ -0.82
UBA4YHR111W YDR056CQ12025 205 aa9.95□□□□□ -0.82
UBA4YHR111W MDY2Q12285 212 aa9.95□□□□□ -0.82
UBA4YHR111W CMR1Q12510 522 aaKnown RBP9.95□□□□□ -0.82
UBA4YHR111W STT4P37297 1900 aa9.95□□□□□ -0.82
UBA4YHR111W YCK2P23292 546 aaKnown RBP9.94□□□□□ -0.82
UBA4YHR111W SKN1P33336 771 aa9.94□□□□□ -0.82
UBA4YHR111W RIM11P38615 370 aa9.94□□□□□ -0.82
UBA4YHR111W YER158CP40095 573 aa9.94□□□□□ -0.82
UBA4YHR111W YFR020WP43600 232 aa9.94□□□□□ -0.82
UBA4YHR111W RTS3P53289 263 aa9.94□□□□□ -0.82
UBA4YHR111W YOL036WQ08206 761 aa9.94□□□□□ -0.82
UBA4YHR111W COX6P00427 148 aa9.93□□□□□ -0.82
UBA4YHR111W RSR1P13856 272 aa9.93□□□□□ -0.82
UBA4YHR111W STE4P18851 423 aa9.93□□□□□ -0.82
UBA4YHR111W PHA2P32452 334 aa9.93□□□□□ -0.82
UBA4YHR111W MEI5P32489 222 aa9.93□□□□□ -0.82
UBA4YHR111W PDR3P33200 976 aa9.93□□□□□ -0.82
UBA4YHR111W ASK1P35734 292 aa9.93□□□□□ -0.82
UBA4YHR111W SET3P36124 751 aa9.93□□□□□ -0.82
UBA4YHR111W NPT1P39683 429 aaKnown RBP9.93□□□□□ -0.82
UBA4YHR111W YGR015CP53208 328 aa9.93□□□□□ -0.82
UBA4YHR111W RNY1Q02933 434 aaKnown RBP9.93□□□□□ -0.82
UBA4YHR111W BCH1Q05029 724 aa9.93□□□□□ -0.82
UBA4YHR111W STE23Q06010 1027 aa9.93□□□□□ -0.82
UBA4YHR111W VAM6Q07468 1049 aa9.93□□□□□ -0.82
UBA4YHR111W BSC6Q08280 497 aa9.93□□□□□ -0.82
UBA4YHR111W VHS3Q08438 674 aa9.93□□□□□ -0.82
UBA4YHR111W YLR053CQ12026 108 aa9.93□□□□□ -0.82
UBA4YHR111W YKL100CP34248 587 aa9.92□□□□□ -0.82
UBA4YHR111W PLB1P39105 664 aa9.92□□□□□ -0.82
UBA4YHR111W MGS1P40151 587 aa9.92□□□□□ -0.82
UBA4YHR111W YJR149WP47177 404 aa9.92□□□□□ -0.82
UBA4YHR111W DIC1Q06143 298 aa9.92□□□□□ -0.82
UBA4YHR111W DIN7Q12086 430 aa9.92□□□□□ -0.82
UBA4YHR111W BMT6Q12291 365 aa9.92□□□□□ -0.82
UBA4YHR111W FUR1P18562 216 aaKnown RBP9.91□□□□□ -0.82
UBA4YHR111W ARG1P22768 420 aa9.91□□□□□ -0.82
UBA4YHR111W HOG1P32485 435 aa9.91□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms