RNA–Protein interactions for RNA: YHR108W

GGA2, Transcript of Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, yeastyeast

Gene GGA2, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA2YHR108W PEX6P33760 1030 aa8.13□□□□□ -1.11
GGA2YHR108W YKL100CP34248 587 aa8.13□□□□□ -1.11
GGA2YHR108W ALY1P36117 915 aa8.13□□□□□ -1.11
GGA2YHR108W GEX2P36173 615 aa8.13□□□□□ -1.11
GGA2YHR108W NPT1P39683 429 aaKnown RBP8.13□□□□□ -1.11
GGA2YHR108W MEP1P40260 492 aa8.13□□□□□ -1.11
GGA2YHR108W SNL1P40548 159 aa8.13□□□□□ -1.11
GGA2YHR108W RPL17BP46990 184 aaKnown RBP8.13□□□□□ -1.11
GGA2YHR108W YNL033WP53964 284 aa8.13□□□□□ -1.11
GGA2YHR108W YNL019CP53975 284 aa8.13□□□□□ -1.11
GGA2YHR108W MMT1Q03218 510 aa8.13□□□□□ -1.11
GGA2YHR108W SPO71Q03868 1245 aa8.13□□□□□ -1.11
GGA2YHR108W VTA1Q06263 330 aa8.13□□□□□ -1.11
GGA2YHR108W UPC2Q12151 913 aa8.13□□□□□ -1.11
GGA2YHR108W MCD1Q12158 566 aa8.13□□□□□ -1.11
GGA2YHR108W GUK1P15454 187 aaKnown RBP8.12□□□□□ -1.11
GGA2YHR108W PHO81P17442 1178 aa8.12□□□□□ -1.11
GGA2YHR108W PMA2P19657 947 aa8.12□□□□□ -1.11
GGA2YHR108W MNE1P24720 663 aa8.12□□□□□ -1.11
GGA2YHR108W CIN8P27895 1000 aa8.12□□□□□ -1.11
GGA2YHR108W WHI3P34761 661 aaKnown RBP8.12□□□□□ -1.11
GGA2YHR108W MRP8P35719 219 aa8.12□□□□□ -1.11
GGA2YHR108W MPT5P39016 859 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
GGA2YHR108W DSS1P39112 969 aa8.12□□□□□ -1.11
GGA2YHR108W GIP4P39732 760 aa8.12□□□□□ -1.11
GGA2YHR108W NAS6P50086 228 aa8.12□□□□□ -1.11
GGA2YHR108W ORC3P54790 616 aa8.12□□□□□ -1.11
GGA2YHR108W ECM9Q02202 377 aa8.12□□□□□ -1.11
GGA2YHR108W YPL014WQ02606 381 aa8.12□□□□□ -1.11
GGA2YHR108W SVL3Q03088 825 aaKnown RBP8.12□□□□□ -1.11
GGA2YHR108W YMR226CQ05016 267 aaKnown RBP8.12□□□□□ -1.11
GGA2YHR108W SLF1Q12034 447 aaKnown RBP8.12□□□□□ -1.11
GGA2YHR108W PSY3Q12318 242 aa8.12□□□□□ -1.11
GGA2YHR108W SEM1O94742 89 aa8.12□□□□□ -1.11
GGA2YHR108W SUI3P09064 285 aaKnown RBP8.12□□□□□ -1.11
GGA2YHR108W HMG2P12684 1045 aa8.12□□□□□ -1.11
GGA2YHR108W MSS116P15424 664 aaKnown RBP8.12□□□□□ -1.11
GGA2YHR108W ARF2P19146 181 aaKnown RBP8.12□□□□□ -1.11
GGA2YHR108W SGF29P25554 259 aa8.12□□□□□ -1.11
GGA2YHR108W SPB1P25582 841 aaPredicted RBP8.12□□□□□ -1.11
GGA2YHR108W RPL5P26321 297 aaKnown RBP8.12□□□□□ -1.11
GGA2YHR108W MRPL9P31334 269 aa8.12□□□□□ -1.11
GGA2YHR108W ISF1P32488 338 aa8.12□□□□□ -1.11
GGA2YHR108W CBF5P33322 483 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
GGA2YHR108W THI80P35202 319 aa8.12□□□□□ -1.11
GGA2YHR108W ECM10P39987 644 aa8.12□□□□□ -1.11
GGA2YHR108W YER034WP40022 185 aaKnown RBP8.12□□□□□ -1.11
GGA2YHR108W GCD10P41814 478 aa8.12□□□□□ -1.11
GGA2YHR108W UPF3P48412 387 aaKnown RBP8.12□□□□□ -1.11
GGA2YHR108W SPC105P53148 917 aa8.12□□□□□ -1.11
GGA2YHR108W DCP2P53550 970 aaKnown RBP8.12□□□□□ -1.11
GGA2YHR108W PIR1Q03178 341 aa8.12□□□□□ -1.11
GGA2YHR108W TGL5Q12043 749 aa8.12□□□□□ -1.11
GGA2YHR108W THP2O13539 261 aaKnown RBP8.11□□□□□ -1.11
GGA2YHR108W SUC2P00724 532 aa8.11□□□□□ -1.11
GGA2YHR108W SNF4P12904 322 aa8.11□□□□□ -1.11
GGA2YHR108W PPH22P23595 377 aa8.11□□□□□ -1.11
GGA2YHR108W PEX1P24004 1043 aa8.11□□□□□ -1.11
GGA2YHR108W SFP1P32432 683 aa8.11□□□□□ -1.11
GGA2YHR108W UGP1P32861 499 aaKnown RBP8.11□□□□□ -1.11
GGA2YHR108W PRP18P33411 251 aaPredicted RBP8.11□□□□□ -1.11
GGA2YHR108W ROT2P38138 954 aa8.11□□□□□ -1.11
GGA2YHR108W FTH1P38310 465 aa8.11□□□□□ -1.11
GGA2YHR108W FAA2P39518 744 aa8.11□□□□□ -1.11
GGA2YHR108W FMP10P40098 244 aa8.11□□□□□ -1.11
GGA2YHR108W RPL34BP40525 121 aaKnown RBP8.11□□□□□ -1.11
GGA2YHR108W GTO1P48239 356 aa8.11□□□□□ -1.11
GGA2YHR108W PEX13P80667 386 aa8.11□□□□□ -1.11
GGA2YHR108W SSL1Q04673 461 aaPredicted RBP8.11□□□□□ -1.11
GGA2YHR108W GET4Q12125 312 aa8.11□□□□□ -1.11
GGA2YHR108W YVC1Q12324 675 aa8.11□□□□□ -1.11
GGA2YHR108W SPT3P06844 337 aa8.1□□□□□ -1.11
GGA2YHR108W TOP3P13099 656 aa8.1□□□□□ -1.11
GGA2YHR108W PEX34P25584 144 aa8.1□□□□□ -1.11
GGA2YHR108W MDJ1P35191 511 aa8.1□□□□□ -1.11
GGA2YHR108W IRR1P40541 1150 aa8.1□□□□□ -1.11
GGA2YHR108W MPH1P40562 993 aa8.1□□□□□ -1.11
GGA2YHR108W RMD8P43620 662 aa8.1□□□□□ -1.11
GGA2YHR108W AIM23P47015 356 aa8.1□□□□□ -1.11
GGA2YHR108W YJR124CP47159 448 aa8.1□□□□□ -1.11
GGA2YHR108W DSL1P53847 754 aa8.1□□□□□ -1.11
GGA2YHR108W YNL018CP53976 612 aa8.1□□□□□ -1.11
GGA2YHR108W SEG1Q04279 960 aa8.1□□□□□ -1.11
GGA2YHR108W IRC10Q08118 586 aa8.1□□□□□ -1.11
GGA2YHR108W YOR012WQ12351 137 aa8.1□□□□□ -1.11
GGA2YHR108W CBP2P03874 630 aaPredicted RBP8.1□□□□□ -1.11
GGA2YHR108W HXK2P04807 486 aaKnown RBP8.1□□□□□ -1.11
GGA2YHR108W HTA2P04912 132 aa8.1□□□□□ -1.11
GGA2YHR108W ARG3P05150 338 aa8.1□□□□□ -1.11
GGA2YHR108W RSR1P13856 272 aa8.1□□□□□ -1.11
GGA2YHR108W SEC63P14906 663 aa8.1□□□□□ -1.11
GGA2YHR108W UGA1P17649 471 aa8.1□□□□□ -1.11
GGA2YHR108W CDC3P32457 520 aaKnown RBP8.1□□□□□ -1.11
GGA2YHR108W STE14P32584 239 aa8.1□□□□□ -1.11
GGA2YHR108W BCK2P33306 851 aa8.1□□□□□ -1.11
GGA2YHR108W TIP20P33891 701 aa8.1□□□□□ -1.11
GGA2YHR108W PHO11P35842 467 aa8.1□□□□□ -1.11
GGA2YHR108W MRPL17P36528 281 aa8.1□□□□□ -1.11
GGA2YHR108W YBR241CP38142 488 aa8.1□□□□□ -1.11
GGA2YHR108W PHO12P38693 467 aa8.1□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms