RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W AYT1Q12226 474 aa2.94□□□□□ -1.94
RPF1YHR088W YBR085C-AO43137 85 aa2.93□□□□□ -1.94
RPF1YHR088W SUP35P05453 685 aaKnown RBP2.93□□□□□ -1.94
RPF1YHR088W NUC1P08466 329 aa2.93□□□□□ -1.94
RPF1YHR088W UBC1P21734 215 aaKnown RBP2.93□□□□□ -1.94
RPF1YHR088W MSM1P22438 575 aa2.93□□□□□ -1.94
RPF1YHR088W ROT2P38138 954 aa2.93□□□□□ -1.94
RPF1YHR088W MTC4P38335 694 aaKnown RBP2.93□□□□□ -1.94
RPF1YHR088W YVH1Q02256 364 aaKnown RBP2.93□□□□□ -1.94
RPF1YHR088W CAR1P00812 333 aaKnown RBP2.92□□□□□ -1.94
RPF1YHR088W ATS1P31386 333 aa2.92□□□□□ -1.94
RPF1YHR088W HXT1P32465 570 aa2.92□□□□□ -1.94
RPF1YHR088W YEL045CP32616 141 aa2.92□□□□□ -1.94
RPF1YHR088W XRS2P33301 854 aa2.92□□□□□ -1.94
RPF1YHR088W TSC10P38342 320 aa2.92□□□□□ -1.94
RPF1YHR088W DBP8P38719 431 aa2.92□□□□□ -1.94
RPF1YHR088W NPR2P39923 615 aa2.92□□□□□ -1.94
RPF1YHR088W ACA1P39970 489 aa2.92□□□□□ -1.94
RPF1YHR088W IME4P41833 600 aa2.92□□□□□ -1.94
RPF1YHR088W SDT1P53078 280 aa2.92□□□□□ -1.94
RPF1YHR088W YGL039WP53183 348 aaKnown RBP2.92□□□□□ -1.94
RPF1YHR088W ERG26P53199 349 aaKnown RBP2.92□□□□□ -1.94
RPF1YHR088W RHO4Q00246 291 aa2.92□□□□□ -1.94
RPF1YHR088W GLO2Q05584 274 aa2.92□□□□□ -1.94
RPF1YHR088W ERG8P24521 451 aa2.91□□□□□ -1.94
RPF1YHR088W TUL1P36096 758 aa2.91□□□□□ -1.94
RPF1YHR088W MSO1P53604 210 aaKnown RBP2.91□□□□□ -1.94
RPF1YHR088W MUB1Q03162 620 aa2.91□□□□□ -1.94
RPF1YHR088W DIC1Q06143 298 aa2.91□□□□□ -1.94
RPF1YHR088W PSK2Q08217 1101 aa2.91□□□□□ -1.94
RPF1YHR088W HNT3Q08702 217 aa2.91□□□□□ -1.94
RPF1YHR088W YOR019WQ99248 730 aa2.91□□□□□ -1.94
RPF1YHR088W PFK2P16862 959 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
RPF1YHR088W PDB1P32473 366 aaKnown RBP2.9□□□□□ -1.95
RPF1YHR088W SRO77P38163 1010 aa2.9□□□□□ -1.95
RPF1YHR088W ANS1P38832 159 aa2.9□□□□□ -1.95
RPF1YHR088W ALT2P52892 507 aa2.9□□□□□ -1.95
RPF1YHR088W ARC35P53731 342 aaKnown RBP2.9□□□□□ -1.95
RPF1YHR088W YNR061CP53747 219 aa2.9□□□□□ -1.95
RPF1YHR088W LEU9Q12166 604 aaKnown RBP2.9□□□□□ -1.95
RPF1YHR088W PCD1Q12524 340 aa2.9□□□□□ -1.95
RPF1YHR088W RRP12Q12754 1228 aaKnown RBP2.9□□□□□ -1.95
RPF1YHR088W YCL021W-AQ96VH3 125 aa2.9□□□□□ -1.95
RPF1YHR088W LPD1P09624 499 aaKnown RBP2.89□□□□□ -1.95
RPF1YHR088W SPT15P13393 240 aaKnown RBP2.89□□□□□ -1.95
RPF1YHR088W RER1P25560 188 aa2.89□□□□□ -1.95
RPF1YHR088W TEF4P36008 412 aaKnown RBP2.89□□□□□ -1.95
RPF1YHR088W PMU1P36069 295 aa2.89□□□□□ -1.95
RPF1YHR088W RIC1P40395 1056 aa2.89□□□□□ -1.95
RPF1YHR088W SEC24P40482 926 aaKnown RBP2.89□□□□□ -1.95
RPF1YHR088W REG1Q00816 1014 aa2.89□□□□□ -1.95
RPF1YHR088W YMR087WQ04299 284 aa2.89□□□□□ -1.95
RPF1YHR088W RCO1Q04779 684 aa2.89□□□□□ -1.95
RPF1YHR088W BLS1Q06071 122 aa2.89□□□□□ -1.95
RPF1YHR088W TFC6Q06339 672 aa2.89□□□□□ -1.95
RPF1YHR088W YDL009CQ12210 107 aa2.89□□□□□ -1.95
RPF1YHR088W HEM2P05373 342 aa2.88□□□□□ -1.95
RPF1YHR088W AMD1P15274 810 aaKnown RBP2.88□□□□□ -1.95
RPF1YHR088W LSB5P25369 354 aa2.88□□□□□ -1.95
RPF1YHR088W ADH7P25377 361 aa2.88□□□□□ -1.95
RPF1YHR088W GRX7P38068 203 aa2.88□□□□□ -1.95
RPF1YHR088W ELO1P39540 310 aa2.88□□□□□ -1.95
RPF1YHR088W ALG8P40351 577 aa2.88□□□□□ -1.95
RPF1YHR088W ENT4Q07872 247 aa2.88□□□□□ -1.95
RPF1YHR088W YLR302CO13544 120 aa2.87□□□□□ -1.95
RPF1YHR088W BUD5P25300 642 aaPredicted RBP2.87□□□□□ -1.95
RPF1YHR088W PAD1P33751 242 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
RPF1YHR088W OSH3P38713 996 aaKnown RBP2.87□□□□□ -1.95
RPF1YHR088W MTC6P38849 526 aa2.87□□□□□ -1.95
RPF1YHR088W PTH1P38876 190 aaKnown RBP2.87□□□□□ -1.95
RPF1YHR088W UME6P39001 836 aa2.87□□□□□ -1.95
RPF1YHR088W BUR6P40096 142 aa2.87□□□□□ -1.95
RPF1YHR088W FMP10P40098 244 aa2.87□□□□□ -1.95
RPF1YHR088W SLZ1P40167 298 aa2.87□□□□□ -1.95
RPF1YHR088W RPS10BP46784 105 aaKnown RBP2.87□□□□□ -1.95
RPF1YHR088W SMM1P53720 384 aaKnown RBP2.87□□□□□ -1.95
RPF1YHR088W YPL014WQ02606 381 aa2.87□□□□□ -1.95
RPF1YHR088W RRN11Q04712 507 aa2.87□□□□□ -1.95
RPF1YHR088W CIA1Q05583 330 aa2.87□□□□□ -1.95
RPF1YHR088W BNA5Q05979 453 aa2.87□□□□□ -1.95
RPF1YHR088W SKG3Q06315 1026 aa2.87□□□□□ -1.95
RPF1YHR088W ECM30Q06673 1274 aa2.87□□□□□ -1.95
RPF1YHR088W SYO1Q07395 620 aa2.87□□□□□ -1.95
RPF1YHR088W RPB2P08518 1224 aaKnown RBP2.86□□□□□ -1.95
RPF1YHR088W PEP5P12868 1029 aa2.86□□□□□ -1.95
RPF1YHR088W APE1P14904 514 aa2.86□□□□□ -1.95
RPF1YHR088W PUT3P25502 979 aaPredicted RBP2.86□□□□□ -1.95
RPF1YHR088W MSN2P33748 704 aa2.86□□□□□ -1.95
RPF1YHR088W IFA38P38286 347 aa2.86□□□□□ -1.95
RPF1YHR088W VPS52P39904 641 aa2.86□□□□□ -1.95
RPF1YHR088W SHO1P40073 367 aa2.86□□□□□ -1.95
RPF1YHR088W SMK1P41808 388 aa2.86□□□□□ -1.95
RPF1YHR088W YGR210CP42942 411 aa2.86□□□□□ -1.95
RPF1YHR088W DIA3P52290 468 aa2.86□□□□□ -1.95
RPF1YHR088W VPS74Q06385 345 aa2.86□□□□□ -1.95
RPF1YHR088W PSR1Q07800 427 aa2.86□□□□□ -1.95
RPF1YHR088W RPS10AQ08745 105 aaPredicted RBP2.86□□□□□ -1.95
RPF1YHR088W NYV1Q12255 253 aa2.86□□□□□ -1.95
RPF1YHR088W YME1P32795 747 aa2.85□□□□□ -1.95
RPF1YHR088W PRS1P32895 427 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms