RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	PCT1	P13259	424 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	RSR1	P13856	272 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	HSP60	P19882	572 aa	Known RBP	5.43	□□□□□ -1.54
RSC30	YHR056C	TYR1	P20049	452 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	RPB10	P22139	70 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	MRPL32	P25348	183 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	RVS167	P39743	482 aa	Known RBP	5.43	□□□□□ -1.54
RSC30	YHR056C	CUP9	P41817	306 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	PXA1	P41909	870 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	GCV1	P48015	400 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	DAS2	Q12084	232 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	YDR018C	Q12185	396 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	TPO4	Q12256	659 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	GLO4	Q12320	285 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	PEP5	P12868	1029 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	RSC6	P25632	483 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	FAA1	P30624	700 aa	Known RBP	5.43	□□□□□ -1.54
RSC30	YHR056C	MRPL9	P31334	269 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	MF(ALPHA)2	P32435	120 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	UTP20	P35194	2493 aa	Known RBP	5.43	□□□□□ -1.54
RSC30	YHR056C	DEF1	P35732	738 aa	Known RBP	5.43	□□□□□ -1.54
RSC30	YHR056C	SHM1	P37292	490 aa	Predicted RBP	5.43	□□□□□ -1.54
RSC30	YHR056C	MRP21	P38175	177 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	MNT3	P40549	630 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	YML6	P51998	286 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	ATF2	P53296	535 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	YSA1	Q01976	231 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	COX17	Q12287	69 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	AVL9	Q12500	764 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	YOR032W-A	Q8TGS1	66 aa		5.43	□□□□□ -1.54
RSC30	YHR056C	MET8	P15807	274 aa		5.42	□□□□□ -1.54
RSC30	YHR056C	ARG1	P22768	420 aa		5.42	□□□□□ -1.54
RSC30	YHR056C	TPS2	P31688	896 aa	Known RBP	5.42	□□□□□ -1.54
RSC30	YHR056C	CEP3	P40969	608 aa		5.42	□□□□□ -1.54
RSC30	YHR056C	IBA57	P47158	497 aa		5.42	□□□□□ -1.54
RSC30	YHR056C	ECM9	Q02202	377 aa		5.42	□□□□□ -1.54
RSC30	YHR056C	YDR541C	Q03049	344 aa		5.42	□□□□□ -1.54
RSC30	YHR056C	YPS7	Q06325	596 aa		5.42	□□□□□ -1.54
RSC30	YHR056C	PUS7	Q08647	676 aa	Known RBP	5.42	□□□□□ -1.54
RSC30	YHR056C	EAP1	P36041	632 aa	Known RBP	5.42	□□□□□ -1.54
RSC30	YHR056C	SEO1	P39709	593 aa		5.42	□□□□□ -1.54
RSC30	YHR056C	RPN14	P53196	417 aa		5.42	□□□□□ -1.54
RSC30	YHR056C	PRP38	Q00723	242 aa	Predicted RBP	5.42	□□□□□ -1.54
RSC30	YHR056C	OSH6	Q02201	448 aa		5.42	□□□□□ -1.54
RSC30	YHR056C	UME1	Q03010	460 aa		5.42	□□□□□ -1.54
RSC30	YHR056C	YLR111W	Q12528	110 aa		5.42	□□□□□ -1.54
RSC30	YHR056C	PHO13	P19881	312 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	CNS1	P33313	385 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	MUD2	P36084	527 aa	Known RBP	5.41	□□□□□ -1.54
RSC30	YHR056C	ALG3	P38179	458 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	EHT1	P38295	451 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	RRT2	P38332	387 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	FRT2	P39734	528 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	ATG36	P46983	293 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	TEL2	P53038	688 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	SPP2	Q02521	185 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	YOR114W	Q12219	294 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	YDL177C	Q12257	170 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	SEC65	P29478	273 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	MEI5	P32489	222 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.41	□□□□□ -1.54	not detected
RSC30	YHR056C	MGM101	P32787	269 aa	Known RBP	5.41	□□□□□ -1.54
RSC30	YHR056C	YBR071W	P38243	211 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	YHR127W	P38833	243 aa	Known RBP	5.41	□□□□□ -1.54
RSC30	YHR056C	MNL1	P38888	796 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	PLB1	P39105	664 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	PMT4	P46971	762 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	JHD2	P47156	728 aa	Predicted RBP	5.41	□□□□□ -1.54
RSC30	YHR056C	NUP53	Q03790	475 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	QCR6	P00127	147 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	FUM1	P08417	488 aa	Known RBP	5.41	□□□□□ -1.54
RSC30	YHR056C	KIP2	P28743	706 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	SAP1	P39955	897 aa	Known RBP	5.41	□□□□□ -1.54
RSC30	YHR056C	ALF1	P53904	254 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	TRS31	Q03337	283 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	ATG29	Q12092	213 aa		5.41	□□□□□ -1.54
RSC30	YHR056C	YAR066W	P0CX18	203 aa		5.4	□□□□□ -1.54
RSC30	YHR056C	YHR214W	P0CX19	203 aa		5.4	□□□□□ -1.54
RSC30	YHR056C	ERR1	P0CX10	437 aa		5.4	□□□□□ -1.55
RSC30	YHR056C	ERR2	P0CX11	437 aa		5.4	□□□□□ -1.55
RSC30	YHR056C	KRE6	P32486	720 aa		5.4	□□□□□ -1.55
RSC30	YHR056C	PRP39	P39682	629 aa	Known RBP	5.4	□□□□□ -1.55
RSC30	YHR056C	NDE1	P40215	560 aa		5.4	□□□□□ -1.55
RSC30	YHR056C	PHB1	P40961	287 aa		5.4	□□□□□ -1.55
RSC30	YHR056C	ERR3	P42222	437 aa		5.4	□□□□□ -1.55
RSC30	YHR056C	TIM54	P47045	478 aa		5.4	□□□□□ -1.55
RSC30	YHR056C	UTP5	Q04177	643 aa	Known RBP	5.4	□□□□□ -1.55
RSC30	YHR056C	TDA9	Q04545	1251 aa		5.4	□□□□□ -1.55
RSC30	YHR056C	RSC3	Q06639	885 aa		5.4	□□□□□ -1.55
RSC30	YHR056C	NBA1	Q08229	501 aa	Known RBP	5.4	□□□□□ -1.55
RSC30	YHR056C	YLR049C	Q12110	428 aa		5.4	□□□□□ -1.55
RSC30	YHR056C	GLK1	P17709	500 aa	Known RBP	5.39	□□□□□ -1.55
RSC30	YHR056C	TSR4	P25040	408 aa		5.39	□□□□□ -1.55
RSC30	YHR056C	ADE1	P27616	306 aa		5.39	□□□□□ -1.55
RSC30	YHR056C	MCM5	P29496	775 aa	Known RBP	5.39	□□□□□ -1.55
RSC30	YHR056C	UTR2	P32623	467 aa		5.39	□□□□□ -1.55
RSC30	YHR056C	VPS24	P36095	224 aa	Known RBP	5.39	□□□□□ -1.55
RSC30	YHR056C	RCK2	P38623	610 aa		5.39	□□□□□ -1.55
RSC30	YHR056C	RTA1	P53047	317 aa		5.39	□□□□□ -1.55
RSC30	YHR056C	MPS1	P54199	764 aa		5.39	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms