RNA–Protein interactions for RNA: YGR161W-B

YGR161W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR161W-B, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR161W-BYGR161W-B VPS54Q12071 889 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B BAG7Q12128 409 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B NCE102Q12207 173 aaRIP-Chip data2.89□□□□□ -1.95not detected
YGR161W-BYGR161W-B TAL1P15019 335 aaKnown RBP2.89□□□□□ -1.95
YGR161W-BYGR161W-B MSB1P21339 1137 aaKnown RBP2.89□□□□□ -1.95
YGR161W-BYGR161W-B PDE1P22434 369 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B PPH22P23595 377 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B SNU114P36048 1008 aaKnown RBP2.89□□□□□ -1.95
YGR161W-BYGR161W-B ELF1P36053 145 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B PFF1P38244 976 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B NTC20P38302 140 aaPredicted RBP2.89□□□□□ -1.95
YGR161W-BYGR161W-B MEF2P39677 819 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B NUP84P52891 726 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B RRN5Q02983 363 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B FRE3Q08905 711 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B DFG16Q99234 619 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B CLC1P17891 233 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B STE4P18851 423 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B YBR144CP34215 104 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B ETP1P38748 585 aaKnown RBP2.89□□□□□ -1.95
YGR161W-BYGR161W-B ELO1P39540 310 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B YJL132WP47014 750 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B RSM28Q03430 361 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B SMA2Q04658 369 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B NDL1Q06568 189 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B SPO7P18410 259 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B IRC8P47046 822 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B MCP2Q06567 569 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B SEC63P14906 663 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B PHO11P35842 467 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B MRPL4P36517 319 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B ASC1P38011 319 aaKnown RBP2.89□□□□□ -1.95
YGR161W-BYGR161W-B PHO12P38693 467 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B DIA4P38705 446 aaPredicted RBP2.89□□□□□ -1.95
YGR161W-BYGR161W-B VPS45P38932 577 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B FUN12P39730 1002 aaKnown RBP2.89□□□□□ -1.95
YGR161W-BYGR161W-B PHM8P40025 321 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B AIM22P47051 409 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B YGR149WP48236 432 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B DRN1P53255 507 aaKnown RBP2.89□□□□□ -1.95
YGR161W-BYGR161W-B PPM1Q04081 328 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B SIL1Q08199 421 aa2.89□□□□□ -1.95
YGR161W-BYGR161W-B PET111P08468 800 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B TRM2P33753 639 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B AGP2P38090 596 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B LIN1P38852 340 aaPredicted RBP2.88□□□□□ -1.95
YGR161W-BYGR161W-B BPL1P48445 690 aaPredicted RBP2.88□□□□□ -1.95
YGR161W-BYGR161W-B YDR179W-AQ03983 463 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B RPN9Q04062 393 aaKnown RBP2.88□□□□□ -1.95
YGR161W-BYGR161W-B MDM30Q05930 598 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B MF(ALPHA)1P01149 165 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B ADE5,7P07244 802 aaKnown RBP2.88□□□□□ -1.95
YGR161W-BYGR161W-B IMD2P38697 523 aaKnown RBP2.88□□□□□ -1.95
YGR161W-BYGR161W-B FAD1P38913 306 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B PKP1P40530 394 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B YFR020WP43600 232 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B RPS10BP46784 105 aaKnown RBP2.88□□□□□ -1.95
YGR161W-BYGR161W-B COS5P47187 383 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B IPI3P53877 555 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B PDS5Q04264 1277 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B COS7Q07788 383 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B YPL216WQ08964 1102 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B YER175W-AQ8TGU4 54 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B AAC1P04710 309 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B SSE1P32589 693 aaKnown RBP2.88□□□□□ -1.95
YGR161W-BYGR161W-B PLB1P39105 664 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B UIP3P39547 235 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B BUD17P53727 317 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B BUD22Q04347 519 aaKnown RBP2.88□□□□□ -1.95
YGR161W-BYGR161W-B RPS10AQ08745 105 aaPredicted RBP2.88□□□□□ -1.95
YGR161W-BYGR161W-B TFB5Q3E7C1 72 aaPredicted RBP2.88□□□□□ -1.95
YGR161W-BYGR161W-B STE3P06783 470 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B HCS1P34243 683 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B MSG5P38590 489 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B BFR1P38934 470 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
YGR161W-BYGR161W-B GCD14P46959 383 aaPredicted RBP2.88□□□□□ -1.95
YGR161W-BYGR161W-B MUP1P50276 574 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B LSB1P53281 241 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B ADE16P54113 591 aaKnown RBP2.88□□□□□ -1.95
YGR161W-BYGR161W-B IRC13Q08630 104 aa2.88□□□□□ -1.95
YGR161W-BYGR161W-B CLN1P20437 546 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B RAD51P25454 400 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B YTA12P40341 825 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B SKO1Q02100 647 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B APL5Q08951 932 aaKnown RBP2.87□□□□□ -1.95
YGR161W-BYGR161W-B TY3A-GQ12173 290 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B TY3A-IQ99219 290 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B CHO1P08456 276 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B NTH1P32356 751 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B YBL055CP34220 418 aaPredicted RBP2.87□□□□□ -1.95
YGR161W-BYGR161W-B PCA1P38360 1216 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B ECM10P39987 644 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B YIR042CP40586 236 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B YNL144CP53907 740 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B UBP16Q02863 499 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B ADE13Q05911 482 aaKnown RBP2.87□□□□□ -1.95
YGR161W-BYGR161W-B ULA1Q12059 462 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B YKL033W-AQ86ZR7 236 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B CBP1P07252 654 aa2.87□□□□□ -1.95
YGR161W-BYGR161W-B TRP4P07285 380 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms