RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W KAP104P38217 918 aaKnown RBP5.35□□□□□ -1.55
CDC43YGL155W AMN1P38285 549 aaPredicted RBP5.35□□□□□ -1.55
CDC43YGL155W YBR197CP38306 217 aa5.35□□□□□ -1.55
CDC43YGL155W TDP1P38319 544 aa5.35□□□□□ -1.55
CDC43YGL155W SFB3P38810 929 aa5.35□□□□□ -1.55
CDC43YGL155W THO1P40040 218 aaKnown RBP5.35□□□□□ -1.55
CDC43YGL155W YTA6P40328 754 aa5.35□□□□□ -1.55
CDC43YGL155W COA1P40452 197 aa5.35□□□□□ -1.55
CDC43YGL155W VHR1P40522 640 aa5.35□□□□□ -1.55
CDC43YGL155W YJR107WP47145 328 aa5.35□□□□□ -1.55
CDC43YGL155W RBL2P48606 106 aaKnown RBP5.35□□□□□ -1.55
CDC43YGL155W BOL2P53082 120 aa5.35□□□□□ -1.55
CDC43YGL155W YNL095CP53932 642 aa5.35□□□□□ -1.55
CDC43YGL155W MTD1Q02046 320 aaKnown RBP5.35□□□□□ -1.55
CDC43YGL155W ECM9Q02202 377 aa5.35□□□□□ -1.55
CDC43YGL155W SSQ1Q05931 657 aaPredicted RBP5.35□□□□□ -1.55
CDC43YGL155W YLR225CQ05948 407 aaKnown RBP5.35□□□□□ -1.55
CDC43YGL155W YCS4Q06156 1176 aa5.35□□□□□ -1.55
CDC43YGL155W CRN1Q06440 651 aa5.35□□□□□ -1.55
CDC43YGL155W YLR413WQ06689 675 aa5.35□□□□□ -1.55
CDC43YGL155W PUN1Q06991 263 aa5.35□□□□□ -1.55
CDC43YGL155W YEH2Q07950 538 aa5.35□□□□□ -1.55
CDC43YGL155W YOR342CQ12182 319 aa5.35□□□□□ -1.55
CDC43YGL155W AHA1Q12449 350 aaKnown RBP5.35□□□□□ -1.55
CDC43YGL155W THP2O13539 261 aaKnown RBP5.34□□□□□ -1.55
CDC43YGL155W COX5AP00424 153 aa5.34□□□□□ -1.55
CDC43YGL155W TOP3P13099 656 aa5.34□□□□□ -1.55
CDC43YGL155W GLN4P13188 809 aaKnown RBP5.34□□□□□ -1.55
CDC43YGL155W CCA1P21269 546 aa5.34□□□□□ -1.55
CDC43YGL155W BUB2P26448 306 aaPredicted RBP5.34□□□□□ -1.55
CDC43YGL155W BEM1P29366 551 aa5.34□□□□□ -1.55
CDC43YGL155W COX13P32799 129 aa5.34□□□□□ -1.55
CDC43YGL155W UGP1P32861 499 aaKnown RBP5.34□□□□□ -1.55
CDC43YGL155W SKT5P34226 696 aa5.34□□□□□ -1.55
CDC43YGL155W CTF13P35203 478 aa5.34□□□□□ -1.55
CDC43YGL155W DEF1P35732 738 aaKnown RBP5.34□□□□□ -1.55
CDC43YGL155W ADD66P36040 267 aa5.34□□□□□ -1.55
CDC43YGL155W YBL029WP38201 376 aa5.34□□□□□ -1.55
CDC43YGL155W RFS1P38234 210 aaKnown RBP5.34□□□□□ -1.55
CDC43YGL155W YBR138CP38277 524 aa5.34□□□□□ -1.55
CDC43YGL155W MSC7P38694 644 aa5.34□□□□□ -1.55
CDC43YGL155W RIM4P38741 713 aa5.34□□□□□ -1.55
CDC43YGL155W FHL1P39521 936 aa5.34□□□□□ -1.55
CDC43YGL155W ECM10P39987 644 aa5.34□□□□□ -1.55
CDC43YGL155W RGI2P40188 164 aa5.34□□□□□ -1.55
CDC43YGL155W AIM20P40451 204 aa5.34□□□□□ -1.55
CDC43YGL155W IST3P40565 148 aaPredicted RBP5.34□□□□□ -1.55
CDC43YGL155W MSS2P40990 351 aa5.34□□□□□ -1.55
CDC43YGL155W YFL040WP43562 540 aa5.34□□□□□ -1.55
CDC43YGL155W MTO1P53070 669 aa5.34□□□□□ -1.55
CDC43YGL155W YGR053CP53234 283 aa5.34□□□□□ -1.55
CDC43YGL155W IBD2P53892 351 aa5.34□□□□□ -1.55
CDC43YGL155W YNL033WP53964 284 aa5.34□□□□□ -1.55
CDC43YGL155W YNL019CP53975 284 aa5.34□□□□□ -1.55
CDC43YGL155W PRP38Q00723 242 aaPredicted RBP5.34□□□□□ -1.55
CDC43YGL155W SPP2Q02521 185 aa5.34□□□□□ -1.55
CDC43YGL155W UGO1Q03327 502 aa5.34□□□□□ -1.55
CDC43YGL155W YDR239CQ03780 787 aa5.34□□□□□ -1.55
CDC43YGL155W SPO20Q04359 397 aa5.34□□□□□ -1.55
CDC43YGL155W ECM38Q05902 660 aaPredicted RBP5.34□□□□□ -1.55
CDC43YGL155W BLS1Q06071 122 aa5.34□□□□□ -1.55
CDC43YGL155W RSA1Q08932 381 aa5.34□□□□□ -1.55
CDC43YGL155W UBX3Q12229 455 aa5.34□□□□□ -1.55
CDC43YGL155W YPL247CQ12523 523 aa5.34□□□□□ -1.55
CDC43YGL155W CIT2P08679 460 aa5.33□□□□□ -1.56
CDC43YGL155W MSS116P15424 664 aaKnown RBP5.33□□□□□ -1.56
CDC43YGL155W ACO1P19414 778 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
CDC43YGL155W DMC1P25453 334 aa5.33□□□□□ -1.56
CDC43YGL155W POL4P25615 582 aa5.33□□□□□ -1.56
CDC43YGL155W VPH1P32563 840 aaKnown RBP5.33□□□□□ -1.56
CDC43YGL155W DSS4P32601 143 aa5.33□□□□□ -1.56
CDC43YGL155W RPT5P33297 434 aaKnown RBP5.33□□□□□ -1.56
CDC43YGL155W SEC66P33754 206 aa5.33□□□□□ -1.56
CDC43YGL155W PEX6P33760 1030 aa5.33□□□□□ -1.56
CDC43YGL155W SRP72P38688 640 aaKnown RBP5.33□□□□□ -1.56
CDC43YGL155W MUP3P38734 546 aa5.33□□□□□ -1.56
CDC43YGL155W YHR131CP38835 850 aa5.33□□□□□ -1.56
CDC43YGL155W RIC1P40395 1056 aa5.33□□□□□ -1.56
CDC43YGL155W VMA13P41807 478 aaKnown RBP5.33□□□□□ -1.56
CDC43YGL155W ELP2P42935 788 aa5.33□□□□□ -1.56
CDC43YGL155W IRC5P43610 853 aa5.33□□□□□ -1.56
CDC43YGL155W VPS25P47142 202 aa5.33□□□□□ -1.56
CDC43YGL155W MRK1P50873 501 aa5.33□□□□□ -1.56
CDC43YGL155W NCS6P53088 359 aa5.33□□□□□ -1.56
CDC43YGL155W YGR054WP53235 642 aaKnown RBP5.33□□□□□ -1.56
CDC43YGL155W CLD1P53264 445 aa5.33□□□□□ -1.56
CDC43YGL155W GND2P53319 492 aa5.33□□□□□ -1.56
CDC43YGL155W SFB2P53953 876 aa5.33□□□□□ -1.56
CDC43YGL155W NUP100Q02629 959 aa5.33□□□□□ -1.56
CDC43YGL155W YML131WQ03102 365 aa5.33□□□□□ -1.56
CDC43YGL155W YDR131CQ03899 556 aa5.33□□□□□ -1.56
CDC43YGL155W PEX12Q04370 399 aa5.33□□□□□ -1.56
CDC43YGL155W GSF2Q04697 403 aaKnown RBP5.33□□□□□ -1.56
CDC43YGL155W FMP42Q04991 504 aa5.33□□□□□ -1.56
CDC43YGL155W ECM30Q06673 1274 aa5.33□□□□□ -1.56
CDC43YGL155W LOT6Q07923 191 aa5.33□□□□□ -1.56
CDC43YGL155W RSB1Q08417 382 aa5.33□□□□□ -1.56
CDC43YGL155W NUS1Q12063 375 aa5.33□□□□□ -1.56
CDC43YGL155W PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
CDC43YGL155W PKH2Q12236 1081 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms