RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W DPB4Q04603 196 aaKnown RBP5.16□□□□□ -1.58
UBC6YER100W RPL7BQ12213 244 aaKnown RBP5.16□□□□□ -1.58
UBC6YER100W RPN5Q12250 445 aaKnown RBP5.16□□□□□ -1.58
UBC6YER100W PET111P08468 800 aa5.15□□□□□ -1.59
UBC6YER100W KRS1P15180 591 aaKnown RBP5.15□□□□□ -1.59
UBC6YER100W BOS1P25385 244 aa5.15□□□□□ -1.59
UBC6YER100W IMG1P25626 169 aa5.15□□□□□ -1.59
UBC6YER100W GSH1P32477 678 aa5.15□□□□□ -1.59
UBC6YER100W YBL055CP34220 418 aaPredicted RBP5.15□□□□□ -1.59
UBC6YER100W RRT2P38332 387 aa5.15□□□□□ -1.59
UBC6YER100W TSC10P38342 320 aa5.15□□□□□ -1.59
UBC6YER100W POP2P39008 433 aa5.15□□□□□ -1.59
UBC6YER100W CCT7P42943 550 aaKnown RBP5.15□□□□□ -1.59
UBC6YER100W YFR020WP43600 232 aa5.15□□□□□ -1.59
UBC6YER100W GPI8P49018 411 aa5.15□□□□□ -1.59
UBC6YER100W IPI3P53877 555 aa5.15□□□□□ -1.59
UBC6YER100W RAD34Q06665 692 aa5.15□□□□□ -1.59
UBC6YER100W NFI1Q12216 726 aa5.15□□□□□ -1.59
UBC6YER100W FRE6Q12473 712 aa5.15□□□□□ -1.59
UBC6YER100W CTF3Q12748 733 aa5.15□□□□□ -1.59
UBC6YER100W SGS1P35187 1447 aa5.14□□□□□ -1.59
UBC6YER100W ILV2P07342 687 aaKnown RBP5.14□□□□□ -1.59
UBC6YER100W BUD5P25300 642 aaPredicted RBP5.14□□□□□ -1.59
UBC6YER100W MSR1P38714 643 aa5.14□□□□□ -1.59
UBC6YER100W RRF1P38771 230 aa5.14□□□□□ -1.59
UBC6YER100W YHR054CP38780 354 aa5.14□□□□□ -1.59
UBC6YER100W URB2P47108 1174 aa5.14□□□□□ -1.59
UBC6YER100W ERG26P53199 349 aaKnown RBP5.14□□□□□ -1.59
UBC6YER100W HOT1Q03213 719 aa5.14□□□□□ -1.59
UBC6YER100W YMR178WQ03219 274 aaKnown RBP5.14□□□□□ -1.59
UBC6YER100W PDS5Q04264 1277 aa5.14□□□□□ -1.59
UBC6YER100W YDR341CQ05506 607 aaKnown RBP5.14□□□□□ -1.59
UBC6YER100W MMR1Q06324 491 aa5.14□□□□□ -1.59
UBC6YER100W RPL3P14126 387 aaKnown RBP5.13□□□□□ -1.59
UBC6YER100W SPB1P25582 841 aaPredicted RBP5.13□□□□□ -1.59
UBC6YER100W POT1P27796 417 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
UBC6YER100W YME1P32795 747 aa5.13□□□□□ -1.59
UBC6YER100W DAD2P36162 133 aa5.13□□□□□ -1.59
UBC6YER100W GDT1P38301 280 aaPredicted RBP5.13□□□□□ -1.59
UBC6YER100W CIN4P39110 191 aa5.13□□□□□ -1.59
UBC6YER100W EFM4P40516 257 aa5.13□□□□□ -1.59
UBC6YER100W SAE2P46946 345 aa5.13□□□□□ -1.59
UBC6YER100W SKO1Q02100 647 aa5.13□□□□□ -1.59
UBC6YER100W PRP3Q03338 469 aaPredicted RBP5.13□□□□□ -1.59
UBC6YER100W UAF30Q08747 228 aa5.13□□□□□ -1.59
UBC6YER100W FRE3Q08905 711 aa5.13□□□□□ -1.59
UBC6YER100W KEL3Q08979 651 aaPredicted RBP5.13□□□□□ -1.59
UBC6YER100W APL4Q12028 832 aa5.13□□□□□ -1.59
UBC6YER100W RPL1AP0CX43 217 aaKnown RBP5.12□□□□□ -1.59
UBC6YER100W RPL1BP0CX44 217 aaKnown RBP5.12□□□□□ -1.59
UBC6YER100W MRP2P10663 115 aaPredicted RBP5.12□□□□□ -1.59
UBC6YER100W TRX1P22217 103 aaKnown RBP5.12□□□□□ -1.59
UBC6YER100W TUL1P36096 758 aa5.12□□□□□ -1.59
UBC6YER100W LAS1P36146 502 aaPredicted RBP5.12□□□□□ -1.59
UBC6YER100W THI2P38141 450 aa5.12□□□□□ -1.59
UBC6YER100W SLM4P38247 162 aa5.12□□□□□ -1.59
UBC6YER100W ICS2P38284 255 aa5.12□□□□□ -1.59
UBC6YER100W PTR3P43606 678 aa5.12□□□□□ -1.59
UBC6YER100W FMS1P50264 508 aa5.12□□□□□ -1.59
UBC6YER100W TOF1P53840 1238 aa5.12□□□□□ -1.59
UBC6YER100W YNL144CP53907 740 aa5.12□□□□□ -1.59
UBC6YER100W KIN4Q01919 800 aa5.12□□□□□ -1.59
UBC6YER100W RRP45Q05636 305 aaKnown RBP5.12□□□□□ -1.59
UBC6YER100W HBT1Q07653 1046 aaKnown RBP5.12□□□□□ -1.59
UBC6YER100W ACF2Q12168 779 aa5.12□□□□□ -1.59
UBC6YER100W YML133CQ03099 1374 aa5.12□□□□□ -1.59
UBC6YER100W YLL067CQ07888 1374 aa5.12□□□□□ -1.59
UBC6YER100W YLL066CQ99208 1374 aa5.12□□□□□ -1.59
UBC6YER100W HIP1P06775 603 aa5.11□□□□□ -1.59
UBC6YER100W RPL31BP0C2H9 113 aaKnown RBP5.11□□□□□ -1.59
UBC6YER100W YML002WP0CF17 737 aa5.11□□□□□ -1.59
UBC6YER100W RNQ1P25367 405 aa5.11□□□□□ -1.59
UBC6YER100W MSP1P28737 362 aa5.11□□□□□ -1.59
UBC6YER100W TRM2P33753 639 aa5.11□□□□□ -1.59
UBC6YER100W NTC20P38302 140 aaPredicted RBP5.11□□□□□ -1.59
UBC6YER100W MUP3P38734 546 aa5.11□□□□□ -1.59
UBC6YER100W CDC1P40986 491 aa5.11□□□□□ -1.59
UBC6YER100W NET1P47035 1189 aa5.11□□□□□ -1.59
UBC6YER100W COS5P47187 383 aa5.11□□□□□ -1.59
UBC6YER100W RPT4P53549 437 aaKnown RBP5.11□□□□□ -1.59
UBC6YER100W MSC1Q03104 513 aa5.11□□□□□ -1.59
UBC6YER100W YLR455WQ06188 304 aa5.11□□□□□ -1.59
UBC6YER100W THI3Q07471 609 aa5.11□□□□□ -1.59
UBC6YER100W CYK3Q07533 885 aa5.11□□□□□ -1.59
UBC6YER100W COS7Q07788 383 aa5.11□□□□□ -1.59
UBC6YER100W TEN1Q07921 160 aa5.11□□□□□ -1.59
UBC6YER100W CDC45Q08032 650 aa5.11□□□□□ -1.59
UBC6YER100W DCI1Q08558 271 aa5.11□□□□□ -1.59
UBC6YER100W SLK19Q08581 821 aaKnown RBP5.11□□□□□ -1.59
UBC6YER100W MED2Q12124 431 aa5.11□□□□□ -1.59
UBC6YER100W HSP42Q12329 375 aa5.11□□□□□ -1.59
UBC6YER100W ELO2P25358 347 aa5.1□□□□□ -1.59
UBC6YER100W DMC1P25453 334 aa5.1□□□□□ -1.59
UBC6YER100W SIF2P38262 535 aa5.1□□□□□ -1.59
UBC6YER100W FTH1P38310 465 aa5.1□□□□□ -1.59
UBC6YER100W STU2P46675 888 aa5.1□□□□□ -1.59
UBC6YER100W YGR149WP48236 432 aa5.1□□□□□ -1.59
UBC6YER100W ASN1P49089 572 aaKnown RBP5.1□□□□□ -1.59
UBC6YER100W TOM22P49334 152 aa5.1□□□□□ -1.59
UBC6YER100W YGL138CP53122 345 aa5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms