RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W SOK1P40317 901 aa2.13□□□□□ -2.07
SIR4YDR227W YIR016WP40572 265 aa2.13□□□□□ -2.07
SIR4YDR227W SNZ3P43545 298 aa2.13□□□□□ -2.07
SIR4YDR227W SCW11P53189 542 aa2.13□□□□□ -2.07
SIR4YDR227W SNZ2P53824 298 aa2.13□□□□□ -2.07
SIR4YDR227W DUG3P53871 357 aa2.13□□□□□ -2.07
SIR4YDR227W ROY1Q04847 553 aa2.13□□□□□ -2.07
SIR4YDR227W YOR289WQ12012 251 aaPredicted RBP2.13□□□□□ -2.07
SIR4YDR227W NBP2Q12163 236 aa2.13□□□□□ -2.07
SIR4YDR227W HER1Q12276 1246 aa2.13□□□□□ -2.07
SIR4YDR227W ATP2P00830 511 aaKnown RBP2.12□□□□□ -2.07
SIR4YDR227W RIP1P08067 215 aa2.12□□□□□ -2.07
SIR4YDR227W ROX1P25042 368 aa2.12□□□□□ -2.07
SIR4YDR227W ECM4P36156 370 aa2.12□□□□□ -2.07
SIR4YDR227W YER010CP40011 234 aa2.12□□□□□ -2.07
SIR4YDR227W YNL195CP40168 261 aa2.12□□□□□ -2.07
SIR4YDR227W PRM2P40534 656 aa2.12□□□□□ -2.07
SIR4YDR227W POP1P41812 875 aa2.12□□□□□ -2.07
SIR4YDR227W SLS1P42900 643 aa2.12□□□□□ -2.07
SIR4YDR227W HOP2P53187 214 aa2.12□□□□□ -2.07
SIR4YDR227W MSS11Q03825 758 aa2.12□□□□□ -2.07
SIR4YDR227W THI7Q05998 598 aa2.12□□□□□ -2.07
SIR4YDR227W RRT8Q08219 342 aa2.12□□□□□ -2.07
SIR4YDR227W PNO1Q99216 274 aaKnown RBP2.12□□□□□ -2.07
SIR4YDR227W TOR1P35169 2470 aa2.12□□□□□ -2.07
SIR4YDR227W NCP1P16603 691 aaKnown RBP2.12□□□□□ -2.07
SIR4YDR227W PMI40P29952 429 aaKnown RBP2.12□□□□□ -2.07
SIR4YDR227W MSS4P38994 779 aa2.12□□□□□ -2.07
SIR4YDR227W SIT1P39980 628 aa2.12□□□□□ -2.07
SIR4YDR227W BUD8P41698 603 aa2.12□□□□□ -2.07
SIR4YDR227W MRX6P48564 524 aa2.12□□□□□ -2.07
SIR4YDR227W YGR126WP53274 230 aa2.12□□□□□ -2.07
SIR4YDR227W LSC2P53312 427 aa2.12□□□□□ -2.07
SIR4YDR227W CEG1Q01159 459 aaPredicted RBP2.12□□□□□ -2.07
SIR4YDR227W BNA7Q04066 261 aa2.12□□□□□ -2.07
SIR4YDR227W RVB2Q12464 471 aaKnown RBP2.12□□□□□ -2.07
SIR4YDR227W RPL15AP05748 204 aaKnown RBP2.12□□□□□ -2.07
SIR4YDR227W EMP70P32802 667 aa2.12□□□□□ -2.07
SIR4YDR227W LRG1P35688 1017 aa2.12□□□□□ -2.07
SIR4YDR227W ALY1P36117 915 aa2.12□□□□□ -2.07
SIR4YDR227W TAT1P38085 619 aa2.12□□□□□ -2.07
SIR4YDR227W TAT2P38967 592 aa2.12□□□□□ -2.07
SIR4YDR227W MKT1P40850 830 aaKnown RBP2.12□□□□□ -2.07
SIR4YDR227W CHS6P40955 746 aa2.12□□□□□ -2.07
SIR4YDR227W ALT1P52893 592 aa2.12□□□□□ -2.07
SIR4YDR227W YGL185CP53100 379 aa2.12□□□□□ -2.07
SIR4YDR227W TOF1P53840 1238 aa2.12□□□□□ -2.07
SIR4YDR227W YNL165WP53891 406 aa2.12□□□□□ -2.07
SIR4YDR227W ARP5P53946 755 aa2.12□□□□□ -2.07
SIR4YDR227W RPL15BP54780 204 aaPredicted RBP2.12□□□□□ -2.07
SIR4YDR227W NAM8Q00539 523 aaKnown RBP2.12□□□□□ -2.07
SIR4YDR227W PDS5Q04264 1277 aa2.12□□□□□ -2.07
SIR4YDR227W HRD3Q05787 833 aa2.12□□□□□ -2.07
SIR4YDR227W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
SIR4YDR227W NRT1Q08485 598 aa2.12□□□□□ -2.07
SIR4YDR227W YPR1Q12458 312 aa2.12□□□□□ -2.07
SIR4YDR227W HRP1Q99383 534 aaKnown RBP2.12□□□□□ -2.07
SIR4YDR227W MSS18P08593 268 aa2.12□□□□□ -2.07
SIR4YDR227W YMR085WP0CF18 432 aa2.12□□□□□ -2.07
SIR4YDR227W ERG11P10614 530 aa2.12□□□□□ -2.07
SIR4YDR227W YME1P32795 747 aa2.12□□□□□ -2.07
SIR4YDR227W ATO2P32907 282 aa2.12□□□□□ -2.07
SIR4YDR227W YKT6P36015 200 aaKnown RBP2.12□□□□□ -2.07
SIR4YDR227W GIP1P38229 639 aa2.12□□□□□ -2.07
SIR4YDR227W SET5P38890 526 aaKnown RBP2.12□□□□□ -2.07
SIR4YDR227W SPT8P38915 602 aa2.12□□□□□ -2.07
SIR4YDR227W SAK1P38990 1142 aa2.12□□□□□ -2.07
SIR4YDR227W SEO1P39709 593 aa2.12□□□□□ -2.07
SIR4YDR227W NPP2P39997 493 aa2.12□□□□□ -2.07
SIR4YDR227W DSE1P40077 573 aa2.12□□□□□ -2.07
SIR4YDR227W PRM10P42946 383 aa2.12□□□□□ -2.07
SIR4YDR227W NOP9P47077 666 aaKnown RBP2.12□□□□□ -2.07
SIR4YDR227W DAM1P53267 343 aa2.12□□□□□ -2.07
SIR4YDR227W SHE9Q04172 456 aa2.12□□□□□ -2.07
SIR4YDR227W TAF11Q04226 346 aa2.12□□□□□ -2.07
SIR4YDR227W GLO2Q05584 274 aa2.12□□□□□ -2.07
SIR4YDR227W TMS1Q12116 473 aa2.12□□□□□ -2.07
SIR4YDR227W YOR019WQ99248 730 aa2.12□□□□□ -2.07
SIR4YDR227W AI1P03875 834 aa2.11□□□□□ -2.07
SIR4YDR227W CLC1P17891 233 aa2.11□□□□□ -2.07
SIR4YDR227W PMA2P19657 947 aa2.11□□□□□ -2.07
SIR4YDR227W CKI1P20485 582 aa2.11□□□□□ -2.07
SIR4YDR227W DAL82P21705 255 aa2.11□□□□□ -2.07
SIR4YDR227W GID7P25569 745 aa2.11□□□□□ -2.07
SIR4YDR227W CDC12P32468 407 aaKnown RBP2.11□□□□□ -2.07
SIR4YDR227W RPD3P32561 433 aa2.11□□□□□ -2.07
SIR4YDR227W SSE2P32590 693 aaKnown RBP2.11□□□□□ -2.07
SIR4YDR227W INP51P40559 946 aaKnown RBP2.11□□□□□ -2.07
SIR4YDR227W NOP13P53883 403 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
SIR4YDR227W GTO3Q04806 366 aa2.11□□□□□ -2.07
SIR4YDR227W HOF1Q05080 669 aa2.11□□□□□ -2.07
SIR4YDR227W TMA16Q08687 178 aa2.11□□□□□ -2.07
SIR4YDR227W YDL176WQ12027 708 aa2.11□□□□□ -2.07
SIR4YDR227W AI3P03877 415 aa2.11□□□□□ -2.07
SIR4YDR227W RPL6BP05739 176 aaKnown RBP2.11□□□□□ -2.07
SIR4YDR227W ADE2P21264 571 aaKnown RBP2.11□□□□□ -2.07
SIR4YDR227W YCR051WP25631 222 aa2.11□□□□□ -2.07
SIR4YDR227W ATG12P38316 186 aa2.11□□□□□ -2.07
SIR4YDR227W PCM1P38628 557 aaKnown RBP2.11□□□□□ -2.07
SIR4YDR227W STN1P38960 494 aa2.11□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms