RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPR28	YDR218C	TDH1	P00360	332 aa	Known RBP	4.65	□□□□□ -1.67
SPR28	YDR218C	GAL80	P04387	435 aa		4.65	□□□□□ -1.67
SPR28	YDR218C	PRP2	P20095	876 aa	Predicted RBP	4.65	□□□□□ -1.67
SPR28	YDR218C	ADE2	P21264	571 aa	Known RBP	4.65	□□□□□ -1.67
SPR28	YDR218C	VMA16	P23968	213 aa		4.65	□□□□□ -1.67
SPR28	YDR218C	PRD1	P25375	712 aa		4.65	□□□□□ -1.67
SPR28	YDR218C	CUE2	P36075	443 aa	Known RBP	4.65	□□□□□ -1.67
SPR28	YDR218C	GLG1	P36143	616 aa		4.65	□□□□□ -1.67
SPR28	YDR218C	YBL028C	P38202	106 aa		4.65	□□□□□ -1.67
SPR28	YDR218C	SLM4	P38247	162 aa		4.65	□□□□□ -1.67
SPR28	YDR218C	NTC20	P38302	140 aa	Predicted RBP	4.65	□□□□□ -1.67
SPR28	YDR218C	GID8	P40208	455 aa		4.65	□□□□□ -1.67
SPR28	YDR218C	MAF1	P41910	395 aa		4.65	□□□□□ -1.67
SPR28	YDR218C	YFR018C	P43599	363 aa		4.65	□□□□□ -1.67
SPR28	YDR218C	PET130	P47065	347 aa		4.65	□□□□□ -1.67
SPR28	YDR218C	EMC2	P47133	292 aa	Known RBP	4.65	□□□□□ -1.67
SPR28	YDR218C	YGR054W	P53235	642 aa	Known RBP	4.65	□□□□□ -1.67
SPR28	YDR218C	RPN9	Q04062	393 aa	Known RBP	4.65	□□□□□ -1.67
SPR28	YDR218C	RRB1	Q04225	511 aa	Known RBP	4.65	□□□□□ -1.67
SPR28	YDR218C	VPS36	Q06696	566 aa		4.65	□□□□□ -1.67
SPR28	YDR218C	DIA2	Q08496	732 aa	Predicted RBP	4.65	□□□□□ -1.67
SPR28	YDR218C	FMP40	Q08968	688 aa	Predicted RBP	4.65	□□□□□ -1.67
SPR28	YDR218C	PNO1	Q99216	274 aa	Known RBP	4.65	□□□□□ -1.67
SPR28	YDR218C	ISN1	Q99312	450 aa		4.65	□□□□□ -1.67
SPR28	YDR218C	CBP2	P03874	630 aa	Predicted RBP	4.64	□□□□□ -1.67
SPR28	YDR218C	SUP35	P05453	685 aa	Known RBP	4.64	□□□□□ -1.67
SPR28	YDR218C	LPD1	P09624	499 aa	Known RBP	4.64	□□□□□ -1.67
SPR28	YDR218C	KSS1	P14681	368 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	EFB1	P32471	206 aa	Known RBP	4.64	□□□□□ -1.67
SPR28	YDR218C	MTC7	P32633	139 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	YME2	P32843	850 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	STB5	P38699	743 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	KEL1	P38853	1164 aa	Known RBP	4.64	□□□□□ -1.67
SPR28	YDR218C	PFA3	P42836	336 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	YJL107C	P42947	387 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	GCN20	P43535	752 aa	Known RBP	4.64	□□□□□ -1.67
SPR28	YDR218C	YJL163C	P46996	555 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	BIT61	P47041	543 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	YGR149W	P48236	432 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	APT1	P49435	187 aa	Known RBP	4.64	□□□□□ -1.67
SPR28	YDR218C	STR3	P53101	465 aa	Known RBP	4.64	□□□□□ -1.67
SPR28	YDR218C	BOP3	P53958	396 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	RSM28	Q03430	361 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	ATC1	Q04005	294 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	MUS81	Q04149	632 aa	Predicted RBP	4.64	□□□□□ -1.67
SPR28	YDR218C	ECM18	Q04623	453 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	ARR1	Q06596	294 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	AEP3	Q12089	606 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	LEU9	Q12166	604 aa	Known RBP	4.64	□□□□□ -1.67
SPR28	YDR218C	MRPL23	Q12487	163 aa	Predicted RBP	4.64	□□□□□ -1.67
SPR28	YDR218C	ADF1	Q2V2Q1	113 aa		4.64	□□□□□ -1.67
SPR28	YDR218C	HIP1	P06775	603 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	PDE2	P06776	526 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	BOS1	P25385	244 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	NDI1	P32340	513 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	COT1	P32798	439 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	MRPL4	P36517	319 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	MRPL37	P36532	105 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	MNN9	P39107	395 aa	Known RBP	4.63	□□□□□ -1.67
SPR28	YDR218C	SSO2	P39926	295 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	LRO1	P40345	661 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	RPA34	P47006	233 aa	Predicted RBP	4.63	□□□□□ -1.67
SPR28	YDR218C	URB2	P47108	1174 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	TAM41	P53230	385 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	ARG5,6	Q01217	863 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	ABZ2	Q03266	374 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	RRP45	Q05636	305 aa	Known RBP	4.63	□□□□□ -1.67
SPR28	YDR218C	MSC3	Q05812	728 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	BCP1	Q06338	283 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	YFH1	Q07540	174 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	MED2	Q12124	431 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	POM34	Q12445	299 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	SPE4	Q12455	300 aa		4.63	□□□□□ -1.67
SPR28	YDR218C	ARD1	P07347	238 aa	Predicted RBP	4.62	□□□□□ -1.67
SPR28	YDR218C	SAM1	P10659	382 aa	Known RBP	4.62	□□□□□ -1.67
SPR28	YDR218C	PDA1	P16387	420 aa	Known RBP	4.62	□□□□□ -1.67
SPR28	YDR218C	DAP2	P18962	818 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	CDC42	P19073	191 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	PRE2	P30656	287 aa	Known RBP	4.62	□□□□□ -1.67
SPR28	YDR218C	CRM1	P30822	1084 aa	Known RBP	4.62	□□□□□ -1.67
SPR28	YDR218C	AFG1	P32317	509 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	DOA4	P32571	926 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	YBL055C	P34220	418 aa	Predicted RBP	4.62	□□□□□ -1.67
SPR28	YDR218C	KKQ8	P36004	724 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	YBR259W	P38338	688 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	SEC31	P38968	1273 aa	Known RBP	4.62	□□□□□ -1.67
SPR28	YDR218C	ALG5	P40350	334 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	YJL070C	P40361	888 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SPR28	YDR218C	CTK2	P46962	323 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	YGL138C	P53122	345 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	YNL143C	P53908	130 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	STP3	Q05937	343 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	ATG23	Q06671	453 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	UAF30	Q08747	228 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	RBD2	Q12270	262 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	BNR1	P40450	1375 aa		4.62	□□□□□ -1.67
SPR28	YDR218C	ARO3	P14843	370 aa	Known RBP	4.61	□□□□□ -1.67
SPR28	YDR218C	SRB5	P32585	307 aa		4.61	□□□□□ -1.67
SPR28	YDR218C	MRE11	P32829	692 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms