RNA–Protein interactions for RNA: YDR110W

FOB1, Transcript of Nucleolar protein that binds the rDNA replication fork barrier site, yeastyeast

Gene FOB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FOB1YDR110W HDA1P53973 706 aa5.51□□□□□ -1.53
FOB1YDR110W CUS1Q02554 436 aaPredicted RBP5.51□□□□□ -1.53
FOB1YDR110W JIP4Q03361 876 aa5.51□□□□□ -1.53
FOB1YDR110W RCO1Q04779 684 aa5.51□□□□□ -1.53
FOB1YDR110W YOR059CQ08448 450 aaKnown RBP5.51□□□□□ -1.53
FOB1YDR110W PUS9Q12069 462 aa5.51□□□□□ -1.53
FOB1YDR110W GNT1Q12096 491 aa5.51□□□□□ -1.53
FOB1YDR110W SFG1Q12507 346 aa5.51□□□□□ -1.53
FOB1YDR110W YLL067CQ07888 1374 aa5.5□□□□□ -1.53
FOB1YDR110W CBP1P07252 654 aa5.5□□□□□ -1.53
FOB1YDR110W UGA1P17649 471 aa5.5□□□□□ -1.53
FOB1YDR110W YCL002CP25565 263 aa5.5□□□□□ -1.53
FOB1YDR110W ZIP1P31111 875 aa5.5□□□□□ -1.53
FOB1YDR110W GCD11P32481 527 aaKnown RBP5.5□□□□□ -1.53
FOB1YDR110W KAP104P38217 918 aaKnown RBP5.5□□□□□ -1.53
FOB1YDR110W MLH1P38920 769 aa5.5□□□□□ -1.53
FOB1YDR110W SHC1P39000 512 aa5.5□□□□□ -1.53
FOB1YDR110W YER158CP40095 573 aa5.5□□□□□ -1.53
FOB1YDR110W ECM27P47144 725 aa5.5□□□□□ -1.53
FOB1YDR110W MSB3P48566 633 aaPredicted RBP5.5□□□□□ -1.53
FOB1YDR110W SLX9P53251 210 aaPredicted RBP5.5□□□□□ -1.53
FOB1YDR110W YGR126WP53274 230 aa5.5□□□□□ -1.53
FOB1YDR110W CAF130P53280 1122 aaPredicted RBP5.5□□□□□ -1.53
FOB1YDR110W UTP6Q02354 440 aaKnown RBP5.5□□□□□ -1.53
FOB1YDR110W KAP120Q02932 1032 aa5.5□□□□□ -1.53
FOB1YDR110W ARG7Q04728 441 aa5.5□□□□□ -1.53
FOB1YDR110W DFG5Q05031 458 aa5.5□□□□□ -1.53
FOB1YDR110W CTS2Q06350 511 aa5.5□□□□□ -1.53
FOB1YDR110W SRO7Q12038 1033 aa5.5□□□□□ -1.53
FOB1YDR110W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
FOB1YDR110W YDR061WQ12298 539 aa5.5□□□□□ -1.53
FOB1YDR110W SPE4Q12455 300 aa5.5□□□□□ -1.53
FOB1YDR110W NBL1Q3E7Y6 73 aa5.5□□□□□ -1.53
FOB1YDR110W TY1A-LR4P0C2I8 440 aaKnown RBP5.49□□□□□ -1.53
FOB1YDR110W TY1A-DR6P0CX70 440 aa5.49□□□□□ -1.53
FOB1YDR110W TY1A-ER1P0CX71 440 aa5.49□□□□□ -1.53
FOB1YDR110W TY1A-LR2P0CX72 440 aa5.49□□□□□ -1.53
FOB1YDR110W TY1A-PLP0CX73 440 aa5.49□□□□□ -1.53
FOB1YDR110W TY1A-JR1P0CX74 440 aa5.49□□□□□ -1.53
FOB1YDR110W TY1A-LR3P0CX75 440 aa5.49□□□□□ -1.53
FOB1YDR110W TY1A-ML2P0CX76 440 aa5.49□□□□□ -1.53
FOB1YDR110W ATP11P32453 318 aa5.49□□□□□ -1.53
FOB1YDR110W PPS1P38148 807 aa5.49□□□□□ -1.53
FOB1YDR110W MAL32P38158 584 aa5.49□□□□□ -1.53
FOB1YDR110W YMR262WP38430 313 aa5.49□□□□□ -1.53
FOB1YDR110W JHD1P40034 492 aa5.49□□□□□ -1.53
FOB1YDR110W PIG2P40187 538 aa5.49□□□□□ -1.53
FOB1YDR110W RRD1P40454 393 aaKnown RBP5.49□□□□□ -1.53
FOB1YDR110W RRT14P40470 206 aa5.49□□□□□ -1.53
FOB1YDR110W GLG2P47011 380 aa5.49□□□□□ -1.53
FOB1YDR110W MAL12P53341 584 aa5.49□□□□□ -1.53
FOB1YDR110W ARP4P80428 489 aa5.49□□□□□ -1.53
FOB1YDR110W LRS4Q04087 347 aaKnown RBP5.49□□□□□ -1.53
FOB1YDR110W BUD22Q04347 519 aaKnown RBP5.49□□□□□ -1.53
FOB1YDR110W AAD4Q07747 329 aa5.49□□□□□ -1.53
FOB1YDR110W GRE1Q08969 168 aa5.49□□□□□ -1.53
FOB1YDR110W ISU2Q12056 156 aa5.49□□□□□ -1.53
FOB1YDR110W TY1A-GR1Q12085 440 aa5.49□□□□□ -1.53
FOB1YDR110W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.49□□□□□ -1.53
FOB1YDR110W TY1A-OLQ92392 440 aaKnown RBP5.49□□□□□ -1.53
FOB1YDR110W MTR10Q99189 972 aa5.49□□□□□ -1.53
FOB1YDR110W TUS1Q06412 1307 aa5.49□□□□□ -1.53
FOB1YDR110W NUP188P52593 1655 aaKnown RBP5.49□□□□□ -1.53
FOB1YDR110W CDC37P06101 506 aaKnown RBP5.48□□□□□ -1.53
FOB1YDR110W SPE2P21182 396 aa5.48□□□□□ -1.53
FOB1YDR110W RNR1P21524 888 aaKnown RBP5.48□□□□□ -1.53
FOB1YDR110W MEK1P24719 497 aaPredicted RBP5.48□□□□□ -1.53
FOB1YDR110W MCM4P30665 933 aaKnown RBP5.48□□□□□ -1.53
FOB1YDR110W ADD66P36040 267 aa5.48□□□□□ -1.53
FOB1YDR110W YKL151CP36059 337 aa5.48□□□□□ -1.53
FOB1YDR110W MRPL4P36517 319 aa5.48□□□□□ -1.53
FOB1YDR110W PFF1P38244 976 aa5.48□□□□□ -1.53
FOB1YDR110W SLM4P38247 162 aa5.48□□□□□ -1.53
FOB1YDR110W EGD2P38879 174 aaKnown RBP5.48□□□□□ -1.53
FOB1YDR110W YIL165CP40446 119 aa5.48□□□□□ -1.53
FOB1YDR110W ERG10P41338 398 aaKnown RBP5.48□□□□□ -1.53
FOB1YDR110W ULI1P43604 169 aa5.48□□□□□ -1.53
FOB1YDR110W SNX4P47057 423 aa5.48□□□□□ -1.53
FOB1YDR110W RMD9P53140 646 aaKnown RBP5.48□□□□□ -1.53
FOB1YDR110W DIA1P54005 336 aa5.48□□□□□ -1.53
FOB1YDR110W ADE12P80210 433 aaKnown RBP5.48□□□□□ -1.53
FOB1YDR110W NGL2Q03264 515 aaKnown RBP5.48□□□□□ -1.53
FOB1YDR110W RPN9Q04062 393 aaKnown RBP5.48□□□□□ -1.53
FOB1YDR110W VAM6Q07468 1049 aa5.48□□□□□ -1.53
FOB1YDR110W RSB1Q08417 382 aa5.48□□□□□ -1.53
FOB1YDR110W RAD9P14737 1309 aa5.48□□□□□ -1.53
FOB1YDR110W RPL35AP0CX84 120 aaKnown RBP5.48□□□□□ -1.53
FOB1YDR110W RPL35BP0CX85 120 aaKnown RBP5.48□□□□□ -1.53
FOB1YDR110W SYN8P31377 255 aa5.48□□□□□ -1.53
FOB1YDR110W MVD1P32377 396 aaKnown RBP5.48□□□□□ -1.53
FOB1YDR110W CYM1P32898 989 aa5.48□□□□□ -1.53
FOB1YDR110W SPT23P35210 1082 aa5.48□□□□□ -1.53
FOB1YDR110W ALY1P36117 915 aa5.48□□□□□ -1.53
FOB1YDR110W FSH1P38777 243 aaKnown RBP5.48□□□□□ -1.53
FOB1YDR110W SUR2P38992 349 aa5.48□□□□□ -1.53
FOB1YDR110W SSP120P39931 234 aaKnown RBP5.48□□□□□ -1.53
FOB1YDR110W ELO3P40319 345 aa5.48□□□□□ -1.53
FOB1YDR110W NDC80P40460 691 aa5.48□□□□□ -1.53
FOB1YDR110W DSN1P40568 576 aa5.48□□□□□ -1.53
FOB1YDR110W NIT3P49954 291 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms