RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W YTP1P53584 459 aa2.21□□□□□ -2.06
UBP1YDL122W TEP1P53916 434 aa2.21□□□□□ -2.06
UBP1YDL122W MZM1Q03429 123 aaPredicted RBP2.21□□□□□ -2.06
UBP1YDL122W LRS4Q04087 347 aaKnown RBP2.21□□□□□ -2.06
UBP1YDL122W PPN1Q04119 674 aa2.21□□□□□ -2.06
UBP1YDL122W AIM32Q04689 311 aa2.21□□□□□ -2.06
UBP1YDL122W RNH1Q04740 348 aa2.21□□□□□ -2.06
UBP1YDL122W TRE1Q08919 783 aa2.21□□□□□ -2.06
UBP1YDL122W CKA2P19454 339 aa2.2□□□□□ -2.06
UBP1YDL122W HOP1P20050 605 aa2.2□□□□□ -2.06
UBP1YDL122W NUP1P20676 1076 aa2.2□□□□□ -2.06
UBP1YDL122W YCL002CP25565 263 aa2.2□□□□□ -2.06
UBP1YDL122W NAM9P27929 486 aa2.2□□□□□ -2.06
UBP1YDL122W FUN30P31380 1131 aa2.2□□□□□ -2.06
UBP1YDL122W LHS1P36016 881 aa2.2□□□□□ -2.06
UBP1YDL122W AGP2P38090 596 aa2.2□□□□□ -2.06
UBP1YDL122W OPY1P38271 328 aa2.2□□□□□ -2.06
UBP1YDL122W ERC1P38767 581 aa2.2□□□□□ -2.06
UBP1YDL122W GIC1P38785 314 aa2.2□□□□□ -2.06
UBP1YDL122W MPT5P39016 859 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
UBP1YDL122W SAW1P39735 261 aa2.2□□□□□ -2.06
UBP1YDL122W CDC1P40986 491 aa2.2□□□□□ -2.06
UBP1YDL122W VMA13P41807 478 aaKnown RBP2.2□□□□□ -2.06
UBP1YDL122W YFL054CP43549 646 aa2.2□□□□□ -2.06
UBP1YDL122W CTF18P49956 741 aa2.2□□□□□ -2.06
UBP1YDL122W MEP3P53390 489 aa2.2□□□□□ -2.06
UBP1YDL122W RHO3Q00245 231 aaKnown RBP2.2□□□□□ -2.06
UBP1YDL122W YDR131CQ03899 556 aa2.2□□□□□ -2.06
UBP1YDL122W RPC11Q04307 110 aaPredicted RBP2.2□□□□□ -2.06
UBP1YDL122W CRR1Q05790 422 aa2.2□□□□□ -2.06
UBP1YDL122W CIR2Q08822 631 aa2.2□□□□□ -2.06
UBP1YDL122W YPL277CQ08989 487 aa2.2□□□□□ -2.06
UBP1YDL122W VPS68Q12016 184 aa2.2□□□□□ -2.06
UBP1YDL122W NUR1Q12066 484 aa2.2□□□□□ -2.06
UBP1YDL122W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06 RIP-Chip
UBP1YDL122W KCS1Q12494 1050 aa2.2□□□□□ -2.06
UBP1YDL122W TEF1P02994 458 aaKnown RBP2.2□□□□□ -2.06
UBP1YDL122W YSC84P32793 468 aa2.2□□□□□ -2.06
UBP1YDL122W BMH2P34730 273 aaKnown RBP2.2□□□□□ -2.06
UBP1YDL122W RRN3P36070 627 aa2.2□□□□□ -2.06
UBP1YDL122W FAT1P38225 669 aa2.2□□□□□ -2.06
UBP1YDL122W SIP3P38717 1229 aa2.2□□□□□ -2.06
UBP1YDL122W SET5P38890 526 aaKnown RBP2.2□□□□□ -2.06
UBP1YDL122W RAD26P40352 1085 aa2.2□□□□□ -2.06
UBP1YDL122W PHB1P40961 287 aa2.2□□□□□ -2.06
UBP1YDL122W ELP2P42935 788 aa2.2□□□□□ -2.06
UBP1YDL122W RPN14P53196 417 aa2.2□□□□□ -2.06
UBP1YDL122W YMR178WQ03219 274 aaKnown RBP2.2□□□□□ -2.06
UBP1YDL122W HLR1Q04429 423 aa2.2□□□□□ -2.06
UBP1YDL122W CIA1Q05583 330 aa2.2□□□□□ -2.06
UBP1YDL122W ATG10Q07879 167 aa2.2□□□□□ -2.06
UBP1YDL122W PUS7Q08647 676 aaKnown RBP2.2□□□□□ -2.06
UBP1YDL122W AKR2Q12013 749 aa2.2□□□□□ -2.06
UBP1YDL122W YBR182C-AQ8TGU6 64 aa2.2□□□□□ -2.06
UBP1YDL122W COX1P00401 534 aa2.19□□□□□ -2.06
UBP1YDL122W RPL15AP05748 204 aaKnown RBP2.19□□□□□ -2.06
UBP1YDL122W GAS1P22146 559 aaKnown RBP2.19□□□□□ -2.06
UBP1YDL122W PHO3P24031 467 aa2.19□□□□□ -2.06
UBP1YDL122W IMG1P25626 169 aa2.19□□□□□ -2.06
UBP1YDL122W URA1P28272 314 aaPredicted RBP2.19□□□□□ -2.06
UBP1YDL122W RPC82P32349 654 aa2.19□□□□□ -2.06
UBP1YDL122W NGG1P32494 702 aa2.19□□□□□ -2.06
UBP1YDL122W SDS22P36047 338 aa2.19□□□□□ -2.06
UBP1YDL122W MUD2P36084 527 aaKnown RBP2.19□□□□□ -2.06
UBP1YDL122W MRPL37P36532 105 aa2.19□□□□□ -2.06
UBP1YDL122W YIL092WP40497 633 aa2.19□□□□□ -2.06
UBP1YDL122W YGL108CP53139 140 aa2.19□□□□□ -2.06
UBP1YDL122W YGR012WP53206 393 aa2.19□□□□□ -2.06
UBP1YDL122W RPL15BP54780 204 aaPredicted RBP2.19□□□□□ -2.06
UBP1YDL122W SSY1Q03770 852 aa2.19□□□□□ -2.06
UBP1YDL122W TPP1Q03796 238 aa2.19□□□□□ -2.06
UBP1YDL122W DDC1Q08949 612 aa2.19□□□□□ -2.06
UBP1YDL122W GET3Q12154 354 aaKnown RBP2.19□□□□□ -2.06
UBP1YDL122W LEU9Q12166 604 aaKnown RBP2.19□□□□□ -2.06
UBP1YDL122W YLR046CQ12253 270 aa2.19□□□□□ -2.06
UBP1YDL122W ARP7Q12406 477 aa2.19□□□□□ -2.06
UBP1YDL122W AI5_ALPHAQ9ZZX1 630 aa2.19□□□□□ -2.06
UBP1YDL122W GFA1P14742 717 aaKnown RBP2.19□□□□□ -2.06
UBP1YDL122W ATP12P22135 325 aa2.19□□□□□ -2.06
UBP1YDL122W YCR015CP25616 317 aa2.19□□□□□ -2.06
UBP1YDL122W PEP3P27801 918 aa2.19□□□□□ -2.06
UBP1YDL122W SHM2P37291 469 aaKnown RBP2.19□□□□□ -2.06
UBP1YDL122W YAT2P40017 923 aa2.19□□□□□ -2.06
UBP1YDL122W SMK1P41808 388 aa2.19□□□□□ -2.06
UBP1YDL122W BNA1P47096 177 aa2.19□□□□□ -2.06
UBP1YDL122W MUP1P50276 574 aa2.19□□□□□ -2.06
UBP1YDL122W PLB3Q08108 686 aa2.19□□□□□ -2.06
UBP1YDL122W SLK19Q08581 821 aaKnown RBP2.19□□□□□ -2.06
UBP1YDL122W CWC2Q12046 339 aaPredicted RBP2.19□□□□□ -2.06
UBP1YDL122W TIP41Q12199 356 aa2.19□□□□□ -2.06
UBP1YDL122W Q0142Q9ZZW4 58 aa2.19□□□□□ -2.06
UBP1YDL122W SUI2P20459 304 aaKnown RBP2.18□□□□□ -2.06
UBP1YDL122W IME1P21190 360 aa2.18□□□□□ -2.06
UBP1YDL122W SAT4P25333 603 aaKnown RBP2.18□□□□□ -2.06
UBP1YDL122W CAP1P28495 268 aaKnown RBP2.18□□□□□ -2.06
UBP1YDL122W SWI3P32591 825 aa2.18□□□□□ -2.06
UBP1YDL122W SLC1P33333 303 aa2.18□□□□□ -2.06
UBP1YDL122W YKL102CP34249 101 aa2.18□□□□□ -2.06
UBP1YDL122W CCZ1P38273 704 aa2.18□□□□□ -2.06
UBP1YDL122W MSR1P38714 643 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms