RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W YOL073CQ08232 322 aa1.73□□□□□ -2.13
TRM3YDL112W SLX4Q12098 748 aa1.73□□□□□ -2.13
TRM3YDL112W RTK1Q12100 620 aaPredicted RBP1.73□□□□□ -2.13
TRM3YDL112W VPS5Q92331 675 aa1.73□□□□□ -2.13
TRM3YDL112W MDM35O60200 86 aa1.72□□□□□ -2.13
TRM3YDL112W SUC2P00724 532 aa1.72□□□□□ -2.13
TRM3YDL112W STE4P18851 423 aa1.72□□□□□ -2.13
TRM3YDL112W SCL1P21243 252 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W DAL81P21657 970 aa1.72□□□□□ -2.13
TRM3YDL112W XRS2P33301 854 aa1.72□□□□□ -2.13
TRM3YDL112W NIC96P34077 839 aa1.72□□□□□ -2.13
TRM3YDL112W PHO11P35842 467 aa1.72□□□□□ -2.13
TRM3YDL112W PHO12P38693 467 aa1.72□□□□□ -2.13
TRM3YDL112W GET2P40056 285 aa1.72□□□□□ -2.13
TRM3YDL112W YJL070CP40361 888 aa1.72□□□□□ -2.13
TRM3YDL112W BST1P43571 1029 aa1.72□□□□□ -2.13
TRM3YDL112W PRP24P49960 444 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W DRN1P53255 507 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W HOL1P53389 586 aa1.72□□□□□ -2.13
TRM3YDL112W NRM1P53718 249 aa1.72□□□□□ -2.13
TRM3YDL112W MET14Q02196 202 aa1.72□□□□□ -2.13
TRM3YDL112W HEL2Q05580 639 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W YDL086WQ07505 273 aa1.72□□□□□ -2.13
TRM3YDL112W YAP7Q08182 245 aa1.72□□□□□ -2.13
TRM3YDL112W HOS1Q12214 470 aa1.72□□□□□ -2.13
TRM3YDL112W SFI1Q12369 946 aa1.72□□□□□ -2.13
TRM3YDL112W APA1P16550 321 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W LRE1P25579 583 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W MSH1P25846 959 aa1.72□□□□□ -2.13
TRM3YDL112W CDC15P27636 974 aa1.72□□□□□ -2.13
TRM3YDL112W KAR9P32526 644 aa1.72□□□□□ -2.13
TRM3YDL112W RML2P32611 393 aa1.72□□□□□ -2.13
TRM3YDL112W YBR071WP38243 211 aa1.72□□□□□ -2.13
TRM3YDL112W FSH1P38777 243 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W CCT5P40413 562 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W DSN1P40568 576 aa1.72□□□□□ -2.13
TRM3YDL112W YJL132WP47014 750 aa1.72□□□□□ -2.13
TRM3YDL112W YGL081WP53156 320 aa1.72□□□□□ -2.13
TRM3YDL112W CCE1Q03702 353 aa1.72□□□□□ -2.13
TRM3YDL112W YLR456WQ06199 204 aa1.72□□□□□ -2.13
TRM3YDL112W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
TRM3YDL112W YLR046CQ12253 270 aa1.72□□□□□ -2.13
TRM3YDL112W HRP1Q99383 534 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W BI2P03873 423 aa1.72□□□□□ -2.13
TRM3YDL112W ABF1P14164 731 aa1.72□□□□□ -2.13
TRM3YDL112W MRPL8P22353 238 aa1.72□□□□□ -2.13
TRM3YDL112W PHO3P24031 467 aa1.72□□□□□ -2.13
TRM3YDL112W FEN2P25621 512 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W YIH1P25637 258 aa1.72□□□□□ -2.13
TRM3YDL112W OAF3P36023 863 aa1.72□□□□□ -2.13
TRM3YDL112W SWC5P38326 303 aa1.72□□□□□ -2.13
TRM3YDL112W EDC3P39998 551 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W IST3P40565 148 aaPredicted RBP1.72□□□□□ -2.13
TRM3YDL112W BUD13P46947 266 aaPredicted RBP1.72□□□□□ -2.13
TRM3YDL112W MNN11P46985 422 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W TAF4P50105 388 aa1.72□□□□□ -2.13
TRM3YDL112W CSL4P53859 292 aaPredicted RBP1.72□□□□□ -2.13
TRM3YDL112W COG6P53959 839 aa1.72□□□□□ -2.13
TRM3YDL112W PIR1Q03178 341 aa1.72□□□□□ -2.13
TRM3YDL112W AAD4Q07747 329 aa1.72□□□□□ -2.13
TRM3YDL112W CHS5Q12114 671 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W ARP7Q12406 477 aa1.72□□□□□ -2.13
TRM3YDL112W BI3Q9ZZW7 517 aa1.72□□□□□ -2.13
TRM3YDL112W FMP27Q06179 2628 aa1.72□□□□□ -2.13
TRM3YDL112W SEC63P14906 663 aa1.72□□□□□ -2.13
TRM3YDL112W POL30P15873 258 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W CDC43P18898 376 aa1.72□□□□□ -2.13
TRM3YDL112W SNT1P25357 1226 aa1.72□□□□□ -2.13
TRM3YDL112W GEX1P25596 615 aa1.72□□□□□ -2.13
TRM3YDL112W SRB2P34162 210 aa1.72□□□□□ -2.13
TRM3YDL112W GEX2P36173 615 aa1.72□□□□□ -2.13
TRM3YDL112W ADE17P38009 592 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W PIG2P40187 538 aa1.72□□□□□ -2.13
TRM3YDL112W PMT6P42934 759 aa1.72□□□□□ -2.13
TRM3YDL112W GLG2P47011 380 aa1.72□□□□□ -2.13
TRM3YDL112W HXT16P47185 567 aa1.72□□□□□ -2.13
TRM3YDL112W TCB2P48231 1178 aa1.72□□□□□ -2.13
TRM3YDL112W NOP15P53927 220 aaPredicted RBP1.72□□□□□ -2.13
TRM3YDL112W PSR2Q07949 397 aa1.72□□□□□ -2.13
TRM3YDL112W RPN8Q08723 338 aaKnown RBP1.72□□□□□ -2.13
TRM3YDL112W HSP42Q12329 375 aa1.72□□□□□ -2.13
TRM3YDL112W MSR1P38714 643 aa1.71□□□□□ -2.14
TRM3YDL112W YAL037WP39728 267 aa1.71□□□□□ -2.14
TRM3YDL112W MGS1P40151 587 aa1.71□□□□□ -2.14
TRM3YDL112W MKT1P40850 830 aaKnown RBP1.71□□□□□ -2.14
TRM3YDL112W YJL163CP46996 555 aa1.71□□□□□ -2.14
TRM3YDL112W MSE1P48525 536 aa1.71□□□□□ -2.14
TRM3YDL112W STR3P53101 465 aaKnown RBP1.71□□□□□ -2.14
TRM3YDL112W RNT1Q02555 471 aa1.71□□□□□ -2.14
TRM3YDL112W REC102Q02721 264 aa1.71□□□□□ -2.14
TRM3YDL112W YDR132CQ03900 495 aa1.71□□□□□ -2.14
TRM3YDL112W PPN1Q04119 674 aa1.71□□□□□ -2.14
TRM3YDL112W STP3Q05937 343 aa1.71□□□□□ -2.14
TRM3YDL112W TLG2Q08144 397 aa1.71□□□□□ -2.14
TRM3YDL112W PRP2P20095 876 aaPredicted RBP1.71□□□□□ -2.14
TRM3YDL112W DAL82P21705 255 aa1.71□□□□□ -2.14
TRM3YDL112W DAL2P25335 343 aa1.71□□□□□ -2.14
TRM3YDL112W PMI40P29952 429 aaKnown RBP1.71□□□□□ -2.14
TRM3YDL112W STE14P32584 239 aa1.71□□□□□ -2.14
TRM3YDL112W SSZ1P38788 538 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms