RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeast

Gene PBP4, Length 558 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP4	YDL053C	AUR1	P36107	401 aa	Predicted RBP	3.18	□□□□□ -1.9
PBP4	YDL053C	RTT107	P38850	1070 aa		3.18	□□□□□ -1.9
PBP4	YDL053C	PYK2	P52489	506 aa	Known RBP	3.18	□□□□□ -1.9
PBP4	YDL053C	DUO1	P53168	247 aa	Known RBP	3.18	□□□□□ -1.9
PBP4	YDL053C	CUL3	P53202	744 aa		3.18	□□□□□ -1.9
PBP4	YDL053C	EFM6	P53970	246 aa		3.18	□□□□□ -1.9
PBP4	YDL053C	RSM23	Q01163	450 aa		3.18	□□□□□ -1.9
PBP4	YDL053C	YML037C	Q03703	340 aa		3.18	□□□□□ -1.9
PBP4	YDL053C	TMA64	Q04600	565 aa	Known RBP	3.18	□□□□□ -1.9
PBP4	YDL053C	ECM30	Q06673	1274 aa		3.18	□□□□□ -1.9
PBP4	YDL053C	YPL272C	Q08984	517 aa		3.18	□□□□□ -1.9
PBP4	YDL053C	SPE4	Q12455	300 aa		3.18	□□□□□ -1.9
PBP4	YDL053C	CSR2	Q12734	1121 aa		3.18	□□□□□ -1.9
PBP4	YDL053C	YBR126W-A	Q8TGU7	68 aa		3.18	□□□□□ -1.9
PBP4	YDL053C	PUP3	P25451	205 aa	Known RBP	3.17	□□□□□ -1.9
PBP4	YDL053C	POL4	P25615	582 aa		3.17	□□□□□ -1.9
PBP4	YDL053C	PAH1	P32567	862 aa		3.17	□□□□□ -1.9
PBP4	YDL053C	SPC34	P36131	295 aa		3.17	□□□□□ -1.9
PBP4	YDL053C	ROT2	P38138	954 aa		3.17	□□□□□ -1.9
PBP4	YDL053C	YBL029W	P38201	376 aa		3.17	□□□□□ -1.9
PBP4	YDL053C	GUF1	P46943	645 aa		3.17	□□□□□ -1.9
PBP4	YDL053C	LCL3	P53153	274 aa		3.17	□□□□□ -1.9
PBP4	YDL053C	ETT1	Q08421	412 aa	Known RBP	3.17	□□□□□ -1.9
PBP4	YDL053C	YDR056C	Q12025	205 aa		3.17	□□□□□ -1.9
PBP4	YDL053C	YIH1	P25637	258 aa		3.16	□□□□□ -1.9
PBP4	YDL053C	SNC1	P31109	117 aa		3.16	□□□□□ -1.9
PBP4	YDL053C	ERG1	P32476	496 aa	Known RBP	3.16	□□□□□ -1.9
PBP4	YDL053C	YBL055C	P34220	418 aa	Predicted RBP	3.16	□□□□□ -1.9
PBP4	YDL053C	MTR2	P34232	184 aa	Known RBP	3.16	□□□□□ -1.9
PBP4	YDL053C	YKL100C	P34248	587 aa		3.16	□□□□□ -1.9
PBP4	YDL053C	MIC60	P36112	540 aa		3.16	□□□□□ -1.9
PBP4	YDL053C	RIM2	P38127	377 aa		3.16	□□□□□ -1.9
PBP4	YDL053C	YER130C	P39959	443 aa		3.16	□□□□□ -1.9
PBP4	YDL053C	PTR3	P43606	678 aa		3.16	□□□□□ -1.9
PBP4	YDL053C	FAR3	P46671	204 aa		3.16	□□□□□ -1.9
PBP4	YDL053C	APT1	P49435	187 aa	Known RBP	3.16	□□□□□ -1.9
PBP4	YDL053C	YGR127W	P53275	312 aa		3.16	□□□□□ -1.9
PBP4	YDL053C	NGL3	Q03210	505 aa		3.16	□□□□□ -1.9
PBP4	YDL053C	MSS11	Q03825	758 aa		3.16	□□□□□ -1.9
PBP4	YDL053C	BUD22	Q04347	519 aa	Known RBP	3.16	□□□□□ -1.9
PBP4	YDL053C	YMR317W	Q04893	1140 aa		3.16	□□□□□ -1.9
PBP4	YDL053C	LUC7	Q07508	261 aa	Predicted RBP	3.16	□□□□□ -1.9
PBP4	YDL053C	MF(ALPHA)1	P01149	165 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	AAC3	P18238	307 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	TYR1	P20049	452 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	SAN1	P22470	610 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	BUD5	P25300	642 aa	Predicted RBP	3.15	□□□□□ -1.91
PBP4	YDL053C	RPS2	P25443	254 aa	Known RBP	3.15	□□□□□ -1.91
PBP4	YDL053C	IMG1	P25626	169 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	SAC6	P32599	642 aa	Known RBP	3.15	□□□□□ -1.91
PBP4	YDL053C	NUP133	P36161	1157 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	LAG1	P38703	411 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	NOP16	P40007	231 aa	Known RBP	3.15	□□□□□ -1.91
PBP4	YDL053C	AXL1	P40851	1208 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	YGL260W	P53056	76 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	SMM1	P53720	384 aa	Known RBP	3.15	□□□□□ -1.91
PBP4	YDL053C	TDA7	P53882	636 aa	Predicted RBP	3.15	□□□□□ -1.91
PBP4	YDL053C	YVH1	Q02256	364 aa	Known RBP	3.15	□□□□□ -1.91
PBP4	YDL053C	MSC1	Q03104	513 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	YMR160W	Q03823	816 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	DIC1	Q06143	298 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	SSK1	Q07084	712 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	FMP45	Q07651	309 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	HUA2	Q12134	243 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	NOP58	Q12499	511 aa	Known RBP	3.15	□□□□□ -1.91
PBP4	YDL053C	ARP6	Q12509	438 aa		3.15	□□□□□ -1.91
PBP4	YDL053C	SEM1	O94742	89 aa		3.14	□□□□□ -1.91
PBP4	YDL053C	BOS1	P25385	244 aa		3.14	□□□□□ -1.91
PBP4	YDL053C	CMK1	P27466	446 aa	Known RBP	3.14	□□□□□ -1.91
PBP4	YDL053C	ACH1	P32316	526 aa		3.14	□□□□□ -1.91
PBP4	YDL053C	SSE2	P32590	693 aa	Known RBP	3.14	□□□□□ -1.91
PBP4	YDL053C	ICS2	P38284	255 aa		3.14	□□□□□ -1.91
PBP4	YDL053C	CCT6	P39079	546 aa		3.14	□□□□□ -1.91
PBP4	YDL053C	AFG3	P39925	761 aa		3.14	□□□□□ -1.91
PBP4	YDL053C	YJL070C	P40361	888 aa		3.14	□□□□□ -1.91
PBP4	YDL053C	UPF3	P48412	387 aa	Known RBP	3.14	□□□□□ -1.91
PBP4	YDL053C	YPL014W	Q02606	381 aa		3.14	□□□□□ -1.91
PBP4	YDL053C	DAP1	Q12091	152 aa		3.14	□□□□□ -1.91
PBP4	YDL053C	ENT1	Q12518	454 aa		3.14	□□□□□ -1.91
PBP4	YDL053C	SGS1	P35187	1447 aa		3.13	□□□□□ -1.91
PBP4	YDL053C	PMS1	P14242	873 aa		3.13	□□□□□ -1.91
PBP4	YDL053C	SGV1	P23293	657 aa	Known RBP	3.13	□□□□□ -1.91
PBP4	YDL053C	YBR144C	P34215	104 aa		3.13	□□□□□ -1.91
PBP4	YDL053C	UBP11	P36026	717 aa		3.13	□□□□□ -1.91
PBP4	YDL053C	FMP46	P36141	133 aa	Known RBP	3.13	□□□□□ -1.91
PBP4	YDL053C	RPL32	P38061	130 aa	Known RBP	3.13	□□□□□ -1.91
PBP4	YDL053C	RRP3	P38712	501 aa	Known RBP	3.13	□□□□□ -1.91
PBP4	YDL053C	FLC2	P39719	783 aa		3.13	□□□□□ -1.91
PBP4	YDL053C	DUG3	P53871	357 aa		3.13	□□□□□ -1.91
PBP4	YDL053C	RBA50	Q04418	439 aa		3.13	□□□□□ -1.91
PBP4	YDL053C	FMP40	Q08968	688 aa	Predicted RBP	3.13	□□□□□ -1.91
PBP4	YDL053C	NMD4	Q12129	218 aa		3.13	□□□□□ -1.91
PBP4	YDL053C	TIP41	Q12199	356 aa		3.13	□□□□□ -1.91
PBP4	YDL053C	PDH1	Q12428	516 aa	Known RBP	3.13	□□□□□ -1.91
PBP4	YDL053C	TIF3	P34167	436 aa	Known RBP	3.12	□□□□□ -1.91
PBP4	YDL053C	YJL068C	P40363	299 aa		3.12	□□□□□ -1.91
PBP4	YDL053C	DIM1	P41819	318 aa	Known RBP	3.12	□□□□□ -1.91
PBP4	YDL053C	SNG1	P46950	547 aa		3.12	□□□□□ -1.91
PBP4	YDL053C	DSD1	P53095	428 aa		3.12	□□□□□ -1.91
PBP4	YDL053C	YGR126W	P53274	230 aa		3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 35 ms