RNA–Protein interactions for RNA: YDL047W

SIT4, Transcript of Type 2A-related serine-threonine phosphatase, yeastyeast

Gene SIT4, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIT4YDL047W RSC3Q06639 885 aa5.84□□□□□ -1.47
SIT4YDL047W VAC14Q06708 880 aa5.84□□□□□ -1.47
SIT4YDL047W LEU9Q12166 604 aaKnown RBP5.84□□□□□ -1.47
SIT4YDL047W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
SIT4YDL047W ZRT2Q12436 422 aa5.84□□□□□ -1.47
SIT4YDL047W LAG2Q92325 660 aa5.84□□□□□ -1.47
SIT4YDL047W PHO5P00635 467 aa5.83□□□□□ -1.48
SIT4YDL047W ERG20P08524 352 aaKnown RBP5.83□□□□□ -1.48
SIT4YDL047W ATP12P22135 325 aa5.83□□□□□ -1.48
SIT4YDL047W CDC20P26309 610 aa5.83□□□□□ -1.48
SIT4YDL047W MF(ALPHA)2P32435 120 aa5.83□□□□□ -1.48
SIT4YDL047W GCD6P32501 712 aaKnown RBP5.83□□□□□ -1.48
SIT4YDL047W SFC1P33303 322 aa5.83□□□□□ -1.48
SIT4YDL047W GAT1P43574 510 aa5.83□□□□□ -1.48
SIT4YDL047W YFL012WP43580 148 aa5.83□□□□□ -1.48
SIT4YDL047W MPS2P53159 387 aa5.83□□□□□ -1.48
SIT4YDL047W BOP3P53958 396 aa5.83□□□□□ -1.48
SIT4YDL047W ECI1Q05871 280 aa5.83□□□□□ -1.48
SIT4YDL047W CDA2Q06703 312 aa5.83□□□□□ -1.48
SIT4YDL047W MCD1Q12158 566 aa5.83□□□□□ -1.48
SIT4YDL047W YPL066WQ12194 479 aa5.83□□□□□ -1.48
SIT4YDL047W YML002WP0CF17 737 aa5.82□□□□□ -1.48
SIT4YDL047W LAT1P12695 482 aaKnown RBP5.82□□□□□ -1.48
SIT4YDL047W URA4P20051 364 aa5.82□□□□□ -1.48
SIT4YDL047W PHO3P24031 467 aa5.82□□□□□ -1.48
SIT4YDL047W MGT1P26188 188 aa5.82□□□□□ -1.48
SIT4YDL047W BUB3P26449 341 aa5.82□□□□□ -1.48
SIT4YDL047W URA10P30402 227 aa5.82□□□□□ -1.48
SIT4YDL047W ATP11P32453 318 aa5.82□□□□□ -1.48
SIT4YDL047W MEI5P32489 222 aa5.82□□□□□ -1.48
SIT4YDL047W SKT5P34226 696 aa5.82□□□□□ -1.48
SIT4YDL047W MRPL15P36523 253 aa5.82□□□□□ -1.48
SIT4YDL047W PBP2P38151 413 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
SIT4YDL047W FTH1P38310 465 aa5.82□□□□□ -1.48
SIT4YDL047W VHC1P38329 1120 aa5.82□□□□□ -1.48
SIT4YDL047W GIC1P38785 314 aa5.82□□□□□ -1.48
SIT4YDL047W BEM4P39011 633 aa5.82□□□□□ -1.48
SIT4YDL047W PLB1P39105 664 aa5.82□□□□□ -1.48
SIT4YDL047W AIM20P40451 204 aa5.82□□□□□ -1.48
SIT4YDL047W SEC27P41811 889 aaKnown RBP5.82□□□□□ -1.48
SIT4YDL047W VNX1P42839 908 aa5.82□□□□□ -1.48
SIT4YDL047W IKS1P47042 667 aa5.82□□□□□ -1.48
SIT4YDL047W COS12P53053 380 aa5.82□□□□□ -1.48
SIT4YDL047W PRO2P54885 456 aaKnown RBP5.82□□□□□ -1.48
SIT4YDL047W SPP2Q02521 185 aa5.82□□□□□ -1.48
SIT4YDL047W TFB3Q03290 321 aa5.82□□□□□ -1.48
SIT4YDL047W ENT2Q05785 613 aa5.82□□□□□ -1.48
SIT4YDL047W CUE5Q08412 411 aaKnown RBP5.82□□□□□ -1.48
SIT4YDL047W IRC13Q08630 104 aa5.82□□□□□ -1.48
SIT4YDL047W YAR066WP0CX18 203 aa5.81□□□□□ -1.48
SIT4YDL047W YHR214WP0CX19 203 aa5.81□□□□□ -1.48
SIT4YDL047W RPL43AP0CX25 92 aaKnown RBP5.81□□□□□ -1.48
SIT4YDL047W RPL43BP0CX26 92 aa5.81□□□□□ -1.48
SIT4YDL047W CMP2P14747 604 aa5.81□□□□□ -1.48
SIT4YDL047W HSP26P15992 214 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
SIT4YDL047W SEC62P21825 274 aa5.81□□□□□ -1.48
SIT4YDL047W CLB1P24868 471 aa5.81□□□□□ -1.48
SIT4YDL047W VAC17P25591 423 aa5.81□□□□□ -1.48
SIT4YDL047W RPC82P32349 654 aa5.81□□□□□ -1.48
SIT4YDL047W MGM101P32787 269 aaKnown RBP5.81□□□□□ -1.48
SIT4YDL047W YRO2P38079 344 aa5.81□□□□□ -1.48
SIT4YDL047W MPT5P39016 859 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
SIT4YDL047W CAJ1P39101 391 aa5.81□□□□□ -1.48
SIT4YDL047W MNN1P39106 762 aa5.81□□□□□ -1.48
SIT4YDL047W MEP1P40260 492 aa5.81□□□□□ -1.48
SIT4YDL047W UTP18P40362 594 aaPredicted RBP5.81□□□□□ -1.48
SIT4YDL047W YIL086CP40503 102 aa5.81□□□□□ -1.48
SIT4YDL047W ELP2P42935 788 aa5.81□□□□□ -1.48
SIT4YDL047W YFR020WP43600 232 aa5.81□□□□□ -1.48
SIT4YDL047W SGF73P53165 657 aa5.81□□□□□ -1.48
SIT4YDL047W RPL22BP56628 122 aaKnown RBP5.81□□□□□ -1.48
SIT4YDL047W MTQ2Q03920 221 aaPredicted RBP5.81□□□□□ -1.48
SIT4YDL047W SYT1Q06836 1226 aa5.81□□□□□ -1.48
SIT4YDL047W NUS1Q12063 375 aa5.81□□□□□ -1.48
SIT4YDL047W TMS1Q12116 473 aa5.81□□□□□ -1.48
SIT4YDL047W YLR111WQ12528 110 aa5.81□□□□□ -1.48
SIT4YDL047W STE2D6VTK4 431 aa5.8□□□□□ -1.48
SIT4YDL047W HOM3P10869 527 aa5.8□□□□□ -1.48
SIT4YDL047W MET8P15807 274 aa5.8□□□□□ -1.48
SIT4YDL047W CLN2P20438 545 aa5.8□□□□□ -1.48
SIT4YDL047W RAD51P25454 400 aa5.8□□□□□ -1.48
SIT4YDL047W URA7P28274 579 aaKnown RBP5.8□□□□□ -1.48
SIT4YDL047W SFA1P32771 386 aa5.8□□□□□ -1.48
SIT4YDL047W SEF1P34228 1148 aa5.8□□□□□ -1.48
SIT4YDL047W CTP1P38152 299 aa5.8□□□□□ -1.48
SIT4YDL047W YHI9P38765 294 aa5.8□□□□□ -1.48
SIT4YDL047W YHR127WP38833 243 aaKnown RBP5.8□□□□□ -1.48
SIT4YDL047W YHR210CP38893 341 aa5.8□□□□□ -1.48
SIT4YDL047W SPF1P39986 1215 aaKnown RBP5.8□□□□□ -1.48
SIT4YDL047W SAE2P46946 345 aa5.8□□□□□ -1.48
SIT4YDL047W UBX6P47049 396 aa5.8□□□□□ -1.48
SIT4YDL047W YJR030CP47101 745 aa5.8□□□□□ -1.48
SIT4YDL047W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
SIT4YDL047W GCV1P48015 400 aa5.8□□□□□ -1.48
SIT4YDL047W APT1P49435 187 aaKnown RBP5.8□□□□□ -1.48
SIT4YDL047W TRM9P49957 279 aa5.8□□□□□ -1.48
SIT4YDL047W FHN1P53279 174 aa5.8□□□□□ -1.48
SIT4YDL047W GGA1Q06336 557 aa5.8□□□□□ -1.48
SIT4YDL047W CDA1Q06702 301 aa5.8□□□□□ -1.48
SIT4YDL047W YPL272CQ08984 517 aa5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms