RNA–Protein interactions for RNA: YCR094W

CDC50, Transcript of Endosomal protein that interacts with phospholipid flippase Drs2p, yeastyeast

Gene CDC50, Length 1,176 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC50YCR094W YPL272CQ08984 517 aa2.34□□□□□ -2.03
CDC50YCR094W NMD4Q12129 218 aa2.34□□□□□ -2.03
CDC50YCR094W NBP2Q12163 236 aa2.34□□□□□ -2.03
CDC50YCR094W SPE4Q12455 300 aa2.34□□□□□ -2.03
CDC50YCR094W YBR126W-AQ8TGU7 68 aa2.34□□□□□ -2.03
CDC50YCR094W GCN4P03069 281 aa2.33□□□□□ -2.04
CDC50YCR094W MET17P06106 444 aa2.33□□□□□ -2.04
CDC50YCR094W MRP2P10663 115 aaPredicted RBP2.33□□□□□ -2.04
CDC50YCR094W PCT1P13259 424 aa2.33□□□□□ -2.04
CDC50YCR094W CKA1P15790 372 aa2.33□□□□□ -2.04
CDC50YCR094W GLN3P18494 730 aa2.33□□□□□ -2.04
CDC50YCR094W RPC53P25441 422 aa2.33□□□□□ -2.04
CDC50YCR094W PGS1P25578 521 aa2.33□□□□□ -2.04
CDC50YCR094W SRB5P32585 307 aa2.33□□□□□ -2.04
CDC50YCR094W LYS4P49367 693 aaPredicted RBP2.33□□□□□ -2.04
CDC50YCR094W YDR415CQ04033 374 aaPredicted RBP2.33□□□□□ -2.04
CDC50YCR094W SYF1Q04048 859 aaPredicted RBP2.33□□□□□ -2.04
CDC50YCR094W YLR455WQ06188 304 aa2.33□□□□□ -2.04
CDC50YCR094W CTI6Q08923 506 aa2.33□□□□□ -2.04
CDC50YCR094W SWT1Q12104 458 aa2.33□□□□□ -2.04
CDC50YCR094W RRG1Q12167 365 aaPredicted RBP2.33□□□□□ -2.04
CDC50YCR094W YOR019WQ99248 730 aa2.33□□□□□ -2.04
CDC50YCR094W SEC53P07283 254 aaKnown RBP2.32□□□□□ -2.04
CDC50YCR094W RED1P14291 827 aa2.32□□□□□ -2.04
CDC50YCR094W FUR1P18562 216 aaKnown RBP2.32□□□□□ -2.04
CDC50YCR094W RFA2P26754 273 aaKnown RBP2.32□□□□□ -2.04
CDC50YCR094W GCD7P32502 381 aaPredicted RBP2.32□□□□□ -2.04
CDC50YCR094W VMA8P32610 256 aaKnown RBP2.32□□□□□ -2.04
CDC50YCR094W SRO77P38163 1010 aa2.32□□□□□ -2.04
CDC50YCR094W FUN12P39730 1002 aaKnown RBP2.32□□□□□ -2.04
CDC50YCR094W YEL057CP39983 233 aa2.32□□□□□ -2.04
CDC50YCR094W PFK26P40433 827 aaKnown RBP2.32□□□□□ -2.04
CDC50YCR094W YIL161WP40449 235 aaKnown RBP2.32□□□□□ -2.04
CDC50YCR094W SEC24P40482 926 aaKnown RBP2.32□□□□□ -2.04
CDC50YCR094W AXL1P40851 1208 aa2.32□□□□□ -2.04
CDC50YCR094W SWP82P43554 623 aa2.32□□□□□ -2.04
CDC50YCR094W ASI1P54074 624 aa2.32□□□□□ -2.04
CDC50YCR094W YDR131CQ03899 556 aa2.32□□□□□ -2.04
CDC50YCR094W YDR109CQ04585 715 aa2.32□□□□□ -2.04
CDC50YCR094W ATG23Q06671 453 aa2.32□□□□□ -2.04
CDC50YCR094W GRX6Q12438 231 aa2.32□□□□□ -2.04
CDC50YCR094W RTN2Q12443 393 aa2.32□□□□□ -2.04
CDC50YCR094W NOP58Q12499 511 aaKnown RBP2.32□□□□□ -2.04
CDC50YCR094W CSR2Q12734 1121 aa2.32□□□□□ -2.04
CDC50YCR094W SRP54P20424 541 aaKnown RBP2.31□□□□□ -2.04
CDC50YCR094W UTP9P38882 575 aaKnown RBP2.31□□□□□ -2.04
CDC50YCR094W MET18P40469 1032 aa2.31□□□□□ -2.04
CDC50YCR094W IME4P41833 600 aa2.31□□□□□ -2.04
CDC50YCR094W GPD2P41911 440 aaKnown RBP2.31□□□□□ -2.04
CDC50YCR094W UBX6P47049 396 aa2.31□□□□□ -2.04
CDC50YCR094W MSY1P48527 492 aa2.31□□□□□ -2.04
CDC50YCR094W INA17Q02888 182 aa2.31□□□□□ -2.04
CDC50YCR094W EKI1Q03764 534 aa2.31□□□□□ -2.04
CDC50YCR094W RPC11Q04307 110 aaPredicted RBP2.31□□□□□ -2.04
CDC50YCR094W YLR345WQ06137 509 aa2.31□□□□□ -2.04
CDC50YCR094W MCP2Q06567 569 aa2.31□□□□□ -2.04
CDC50YCR094W NUS1Q12063 375 aa2.31□□□□□ -2.04
CDC50YCR094W HUA2Q12134 243 aa2.31□□□□□ -2.04
CDC50YCR094W ERG27Q12452 347 aaKnown RBP2.31□□□□□ -2.04
CDC50YCR094W YOL159C-AQ3E769 90 aa2.31□□□□□ -2.04
CDC50YCR094W CBS1P14066 229 aa2.3□□□□□ -2.04
CDC50YCR094W PDX1P16451 410 aa2.3□□□□□ -2.04
CDC50YCR094W PWP1P21304 576 aaKnown RBP2.3□□□□□ -2.04
CDC50YCR094W LCB1P25045 558 aaKnown RBP2.3□□□□□ -2.04
CDC50YCR094W OCA4P25366 362 aa2.3□□□□□ -2.04
CDC50YCR094W POL4P25615 582 aa2.3□□□□□ -2.04
CDC50YCR094W LOS1P33418 1100 aaPredicted RBP2.3□□□□□ -2.04
CDC50YCR094W TFC3P34111 1160 aa2.3□□□□□ -2.04
CDC50YCR094W BLI1P35727 113 aa2.3□□□□□ -2.04
CDC50YCR094W YKL050CP35736 922 aa2.3□□□□□ -2.04
CDC50YCR094W BYE1P36106 594 aa2.3□□□□□ -2.04
CDC50YCR094W KTR3P38130 404 aaPredicted RBP2.3□□□□□ -2.04
CDC50YCR094W MAL33P38157 468 aa2.3□□□□□ -2.04
CDC50YCR094W MDM31P38880 579 aa2.3□□□□□ -2.04
CDC50YCR094W PHM8P40025 321 aa2.3□□□□□ -2.04
CDC50YCR094W RGI2P40188 164 aa2.3□□□□□ -2.04
CDC50YCR094W SGN1P40561 250 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
CDC50YCR094W DJP1P40564 432 aa2.3□□□□□ -2.04
CDC50YCR094W MET28P40573 187 aa2.3□□□□□ -2.04
CDC50YCR094W RTS2P40962 232 aa2.3□□□□□ -2.04
CDC50YCR094W ARF3P40994 183 aaRIP-Chip data2.3□□□□□ -2.04not detected
CDC50YCR094W IAH1P41734 238 aa2.3□□□□□ -2.04
CDC50YCR094W LCL3P53153 274 aa2.3□□□□□ -2.04
CDC50YCR094W JJJ1P53863 590 aa2.3□□□□□ -2.04
CDC50YCR094W YMR155WQ03795 547 aa2.3□□□□□ -2.04
CDC50YCR094W SKG3Q06315 1026 aa2.3□□□□□ -2.04
CDC50YCR094W CRN1Q06440 651 aa2.3□□□□□ -2.04
CDC50YCR094W GRC3Q07845 632 aa2.3□□□□□ -2.04
CDC50YCR094W RCN2Q12044 265 aa2.3□□□□□ -2.04
CDC50YCR094W YLR049CQ12110 428 aa2.3□□□□□ -2.04
CDC50YCR094W BAG7Q12128 409 aa2.3□□□□□ -2.04
CDC50YCR094W YBR085C-AO43137 85 aa2.29□□□□□ -2.04
CDC50YCR094W PDB1P32473 366 aaKnown RBP2.29□□□□□ -2.04
CDC50YCR094W AUR1P36107 401 aaPredicted RBP2.29□□□□□ -2.04
CDC50YCR094W NTR2P36118 322 aaPredicted RBP2.29□□□□□ -2.04
CDC50YCR094W YBL029WP38201 376 aa2.29□□□□□ -2.04
CDC50YCR094W YNG2P38806 282 aaKnown RBP2.29□□□□□ -2.04
CDC50YCR094W SMF1P38925 575 aa2.29□□□□□ -2.04
CDC50YCR094W FET5P43561 622 aa2.29□□□□□ -2.04
CDC50YCR094W CTK2P46962 323 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 67.5 ms