RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C MNP1P53163 194 aaPredicted RBP4.44□□□□□ -1.7
NPL4YBR170C YGR127WP53275 312 aa4.44□□□□□ -1.7
NPL4YBR170C MUK1Q02866 612 aa4.44□□□□□ -1.7
NPL4YBR170C MMR1Q06324 491 aa4.44□□□□□ -1.7
NPL4YBR170C RPN5Q12250 445 aaKnown RBP4.44□□□□□ -1.7
NPL4YBR170C CTF3Q12748 733 aa4.44□□□□□ -1.7
NPL4YBR170C YML133CQ03099 1374 aa4.44□□□□□ -1.7
NPL4YBR170C YLL067CQ07888 1374 aa4.44□□□□□ -1.7
NPL4YBR170C YLL066CQ99208 1374 aa4.44□□□□□ -1.7
NPL4YBR170C ILV2P07342 687 aaKnown RBP4.43□□□□□ -1.7
NPL4YBR170C VMA2P16140 517 aaKnown RBP4.43□□□□□ -1.7
NPL4YBR170C BRF1P29056 596 aa4.43□□□□□ -1.7
NPL4YBR170C GSH1P32477 678 aa4.43□□□□□ -1.7
NPL4YBR170C HEL1P36113 551 aa4.43□□□□□ -1.7
NPL4YBR170C NUP133P36161 1157 aa4.43□□□□□ -1.7
NPL4YBR170C TDA10P42938 290 aa4.43□□□□□ -1.7
NPL4YBR170C EOS1P53938 366 aa4.43□□□□□ -1.7
NPL4YBR170C YMR206WQ03695 313 aa4.43□□□□□ -1.7
NPL4YBR170C DON1Q05610 365 aa4.43□□□□□ -1.7
NPL4YBR170C RAD34Q06665 692 aa4.43□□□□□ -1.7
NPL4YBR170C KEL3Q08979 651 aaPredicted RBP4.43□□□□□ -1.7
NPL4YBR170C YDL007C-AQ2V2Q0 85 aa4.43□□□□□ -1.7
NPL4YBR170C RTC1Q08281 1341 aa4.43□□□□□ -1.7
NPL4YBR170C RPL7AP05737 244 aaKnown RBP4.43□□□□□ -1.7
NPL4YBR170C POT1P27796 417 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
NPL4YBR170C YME1P32795 747 aa4.43□□□□□ -1.7
NPL4YBR170C YME2P32843 850 aa4.43□□□□□ -1.7
NPL4YBR170C YBL055CP34220 418 aaPredicted RBP4.43□□□□□ -1.7
NPL4YBR170C HCS1P34243 683 aa4.43□□□□□ -1.7
NPL4YBR170C MOH1P38191 138 aa4.43□□□□□ -1.7
NPL4YBR170C SAE2P46946 345 aa4.43□□□□□ -1.7
NPL4YBR170C ASN1P49089 572 aaKnown RBP4.43□□□□□ -1.7
NPL4YBR170C PDS5Q04264 1277 aa4.43□□□□□ -1.7
NPL4YBR170C TAP42Q04372 366 aa4.43□□□□□ -1.7
NPL4YBR170C RPL7BQ12213 244 aaKnown RBP4.43□□□□□ -1.7
NPL4YBR170C KRS1P15180 591 aaKnown RBP4.42□□□□□ -1.7
NPL4YBR170C PMA2P19657 947 aa4.42□□□□□ -1.7
NPL4YBR170C SPE2P21182 396 aa4.42□□□□□ -1.7
NPL4YBR170C TRX1P22217 103 aaKnown RBP4.42□□□□□ -1.7
NPL4YBR170C LTV1P34078 463 aa4.42□□□□□ -1.7
NPL4YBR170C SWH1P35845 1188 aa4.42□□□□□ -1.7
NPL4YBR170C LAS1P36146 502 aaPredicted RBP4.42□□□□□ -1.7
NPL4YBR170C TSC10P38342 320 aa4.42□□□□□ -1.7
NPL4YBR170C MSR1P38714 643 aa4.42□□□□□ -1.7
NPL4YBR170C YHR054CP38780 354 aa4.42□□□□□ -1.7
NPL4YBR170C OPT1P40897 799 aa4.42□□□□□ -1.7
NPL4YBR170C SNM1P40993 198 aa4.42□□□□□ -1.7
NPL4YBR170C PTR3P43606 678 aa4.42□□□□□ -1.7
NPL4YBR170C SMC3P47037 1230 aa4.42□□□□□ -1.7
NPL4YBR170C MPP10P47083 593 aaKnown RBP4.42□□□□□ -1.7
NPL4YBR170C GPI8P49018 411 aa4.42□□□□□ -1.7
NPL4YBR170C YGR111WP53265 400 aa4.42□□□□□ -1.7
NPL4YBR170C YPR003CP53394 754 aa4.42□□□□□ -1.7
NPL4YBR170C ARO10Q06408 635 aa4.42□□□□□ -1.7
NPL4YBR170C CYK3Q07533 885 aa4.42□□□□□ -1.7
NPL4YBR170C YLL032CQ07834 825 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
NPL4YBR170C TEN1Q07921 160 aa4.42□□□□□ -1.7
NPL4YBR170C CHO1P08456 276 aa4.41□□□□□ -1.7
NPL4YBR170C ELO2P25358 347 aa4.41□□□□□ -1.7
NPL4YBR170C BOS1P25385 244 aa4.41□□□□□ -1.7
NPL4YBR170C IDH2P28241 369 aaKnown RBP4.41□□□□□ -1.7
NPL4YBR170C TUL1P36096 758 aa4.41□□□□□ -1.7
NPL4YBR170C ICS2P38284 255 aa4.41□□□□□ -1.7
NPL4YBR170C HEL2Q05580 639 aaKnown RBP4.41□□□□□ -1.7
NPL4YBR170C ETT1Q08421 412 aaKnown RBP4.41□□□□□ -1.7
NPL4YBR170C SEC3P33332 1336 aaKnown RBP4.41□□□□□ -1.7
NPL4YBR170C PPH22P23595 377 aa4.41□□□□□ -1.7
NPL4YBR170C EXO1P39875 702 aa4.41□□□□□ -1.7
NPL4YBR170C MSC1Q03104 513 aa4.41□□□□□ -1.7
NPL4YBR170C YDR341CQ05506 607 aaKnown RBP4.41□□□□□ -1.7
NPL4YBR170C COQ9Q05779 260 aa4.41□□□□□ -1.7
NPL4YBR170C FRE3Q08905 711 aa4.41□□□□□ -1.7
NPL4YBR170C YMR084WA2P2R3 262 aa4.4□□□□□ -1.71
NPL4YBR170C RPL1AP0CX43 217 aaKnown RBP4.4□□□□□ -1.71
NPL4YBR170C RPL1BP0CX44 217 aaKnown RBP4.4□□□□□ -1.71
NPL4YBR170C NIP100P33420 868 aa4.4□□□□□ -1.71
NPL4YBR170C UIP5P36137 443 aa4.4□□□□□ -1.71
NPL4YBR170C SLM4P38247 162 aa4.4□□□□□ -1.71
NPL4YBR170C STU2P46675 888 aa4.4□□□□□ -1.71
NPL4YBR170C NET1P47035 1189 aa4.4□□□□□ -1.71
NPL4YBR170C MDE1P47095 244 aa4.4□□□□□ -1.71
NPL4YBR170C ERG26P53199 349 aaKnown RBP4.4□□□□□ -1.71
NPL4YBR170C CAF130P53280 1122 aaPredicted RBP4.4□□□□□ -1.71
NPL4YBR170C TOF1P53840 1238 aa4.4□□□□□ -1.71
NPL4YBR170C HOT1Q03213 719 aa4.4□□□□□ -1.71
NPL4YBR170C UAF30Q08747 228 aa4.4□□□□□ -1.71
NPL4YBR170C APL4Q12028 832 aa4.4□□□□□ -1.71
NPL4YBR170C ACF2Q12168 779 aa4.4□□□□□ -1.71
NPL4YBR170C STF1P01098 86 aa4.39□□□□□ -1.71
NPL4YBR170C MRP2P10663 115 aaPredicted RBP4.39□□□□□ -1.71
NPL4YBR170C MEP1P40260 492 aa4.39□□□□□ -1.71
NPL4YBR170C CDC1P40986 491 aa4.39□□□□□ -1.71
NPL4YBR170C YJL107CP42947 387 aa4.39□□□□□ -1.71
NPL4YBR170C FYV8P46949 817 aaKnown RBP4.39□□□□□ -1.71
NPL4YBR170C SEC5P89102 971 aa4.39□□□□□ -1.71
NPL4YBR170C YMR178WQ03219 274 aaKnown RBP4.39□□□□□ -1.71
NPL4YBR170C YMR160WQ03823 816 aa4.39□□□□□ -1.71
NPL4YBR170C THI3Q07471 609 aa4.39□□□□□ -1.71
NPL4YBR170C HBT1Q07653 1046 aaKnown RBP4.39□□□□□ -1.71
NPL4YBR170C DCI1Q08558 271 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms