RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C ALA1P40825 983 aaKnown RBP6.72□□□□□ -1.33
LDB7YBL006C YNL320WP42840 284 aa6.72□□□□□ -1.33
LDB7YBL006C GCV1P48015 400 aa6.72□□□□□ -1.33
LDB7YBL006C COS12P53053 380 aa6.72□□□□□ -1.33
LDB7YBL006C SGF73P53165 657 aa6.72□□□□□ -1.33
LDB7YBL006C SIZ1Q04195 904 aa6.72□□□□□ -1.33
LDB7YBL006C RSC2Q06488 889 aa6.72□□□□□ -1.33
LDB7YBL006C HEM15P16622 393 aa6.71□□□□□ -1.34
LDB7YBL006C HOP1P20050 605 aa6.71□□□□□ -1.34
LDB7YBL006C PRP2P20095 876 aaPredicted RBP6.71□□□□□ -1.34
LDB7YBL006C CLN2P20438 545 aa6.71□□□□□ -1.34
LDB7YBL006C BEM3P32873 1128 aa6.71□□□□□ -1.34
LDB7YBL006C SEC61P32915 480 aa6.71□□□□□ -1.34
LDB7YBL006C UBC6P33296 250 aaPredicted RBP6.71□□□□□ -1.34
LDB7YBL006C SOL2P37262 315 aa6.71□□□□□ -1.34
LDB7YBL006C MPT5P39016 859 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
LDB7YBL006C CCT4P39078 528 aaKnown RBP6.71□□□□□ -1.34
LDB7YBL006C HAT2P39984 401 aa6.71□□□□□ -1.34
LDB7YBL006C TFG1P41895 735 aaPredicted RBP6.71□□□□□ -1.34
LDB7YBL006C COG6P53959 839 aa6.71□□□□□ -1.34
LDB7YBL006C ADE12P80210 433 aaKnown RBP6.71□□□□□ -1.34
LDB7YBL006C RRP45Q05636 305 aaKnown RBP6.71□□□□□ -1.34
LDB7YBL006C ADE13Q05911 482 aaKnown RBP6.71□□□□□ -1.34
LDB7YBL006C GLE1Q12315 538 aa6.71□□□□□ -1.34
LDB7YBL006C PST1Q12355 444 aa6.71□□□□□ -1.34
LDB7YBL006C RMP1Q12530 201 aa6.71□□□□□ -1.34
LDB7YBL006C GPA2P10823 449 aa6.7□□□□□ -1.34
LDB7YBL006C MET8P15807 274 aa6.7□□□□□ -1.34
LDB7YBL006C MEI5P32489 222 aa6.7□□□□□ -1.34
LDB7YBL006C RIM11P38615 370 aa6.7□□□□□ -1.34
LDB7YBL006C YHR127WP38833 243 aaKnown RBP6.7□□□□□ -1.34
LDB7YBL006C YJL049WP47048 450 aa6.7□□□□□ -1.34
LDB7YBL006C PMT3P47190 753 aa6.7□□□□□ -1.34
LDB7YBL006C BUD32P53323 261 aa6.7□□□□□ -1.34
LDB7YBL006C HST2P53686 357 aa6.7□□□□□ -1.34
LDB7YBL006C ESF2P53743 316 aaKnown RBP6.7□□□□□ -1.34
LDB7YBL006C SLT2Q00772 484 aa6.7□□□□□ -1.34
LDB7YBL006C MTQ2Q03920 221 aaPredicted RBP6.7□□□□□ -1.34
LDB7YBL006C YMR027WQ04371 470 aa6.7□□□□□ -1.34
LDB7YBL006C RIO1Q12196 484 aaKnown RBP6.7□□□□□ -1.34
LDB7YBL006C YOL107WQ12239 342 aa6.7□□□□□ -1.34
LDB7YBL006C YLR111WQ12528 110 aa6.7□□□□□ -1.34
LDB7YBL006C LAG2Q92325 660 aa6.7□□□□□ -1.34
LDB7YBL006C CYR1P08678 2026 aaKnown RBP6.7□□□□□ -1.34
LDB7YBL006C SEC53P07283 254 aaKnown RBP6.69□□□□□ -1.34
LDB7YBL006C ILS1P09436 1072 aaKnown RBP6.69□□□□□ -1.34
LDB7YBL006C TYR1P20049 452 aa6.69□□□□□ -1.34
LDB7YBL006C AMS1P22855 1083 aa6.69□□□□□ -1.34
LDB7YBL006C KAR4P25583 335 aa6.69□□□□□ -1.34
LDB7YBL006C IMG1P25626 169 aa6.69□□□□□ -1.34
LDB7YBL006C EFM1P38732 585 aa6.69□□□□□ -1.34
LDB7YBL006C SPF1P39986 1215 aaKnown RBP6.69□□□□□ -1.34
LDB7YBL006C FAU1P40099 211 aa6.69□□□□□ -1.34
LDB7YBL006C TIS11P47977 285 aa6.69□□□□□ -1.34
LDB7YBL006C VID22Q05934 901 aa6.69□□□□□ -1.34
LDB7YBL006C UTP13Q05946 817 aaKnown RBP6.69□□□□□ -1.34
LDB7YBL006C GYP1Q08484 637 aa6.69□□□□□ -1.34
LDB7YBL006C CDC21P06785 304 aa6.68□□□□□ -1.34
LDB7YBL006C GAL7P08431 366 aa6.68□□□□□ -1.34
LDB7YBL006C RPB2P08518 1224 aaKnown RBP6.68□□□□□ -1.34
LDB7YBL006C ARG1P22768 420 aa6.68□□□□□ -1.34
LDB7YBL006C YCK2P23292 546 aaKnown RBP6.68□□□□□ -1.34
LDB7YBL006C CLB1P24868 471 aa6.68□□□□□ -1.34
LDB7YBL006C BUB3P26449 341 aa6.68□□□□□ -1.34
LDB7YBL006C MVD1P32377 396 aaKnown RBP6.68□□□□□ -1.34
LDB7YBL006C YEL043WP32618 956 aa6.68□□□□□ -1.34
LDB7YBL006C SFC1P33303 322 aa6.68□□□□□ -1.34
LDB7YBL006C REI1P38344 393 aaPredicted RBP6.68□□□□□ -1.34
LDB7YBL006C DMA1P38823 416 aa6.68□□□□□ -1.34
LDB7YBL006C MTG2P38860 518 aa6.68□□□□□ -1.34
LDB7YBL006C BEM4P39011 633 aa6.68□□□□□ -1.34
LDB7YBL006C PTC2P39966 464 aaKnown RBP6.68□□□□□ -1.34
LDB7YBL006C MEP1P40260 492 aa6.68□□□□□ -1.34
LDB7YBL006C YIL086CP40503 102 aa6.68□□□□□ -1.34
LDB7YBL006C BOL2P53082 120 aa6.68□□□□□ -1.34
LDB7YBL006C MPS2P53159 387 aa6.68□□□□□ -1.34
LDB7YBL006C ERG26P53199 349 aaKnown RBP6.68□□□□□ -1.34
LDB7YBL006C FHN1P53279 174 aa6.68□□□□□ -1.34
LDB7YBL006C YDR056CQ12025 205 aa6.68□□□□□ -1.34
LDB7YBL006C BCY1P07278 416 aaKnown RBP6.67□□□□□ -1.34
LDB7YBL006C RPS4AP0CX35 261 aaKnown RBP6.67□□□□□ -1.34
LDB7YBL006C RPS4BP0CX36 261 aaKnown RBP6.67□□□□□ -1.34
LDB7YBL006C CMP2P14747 604 aa6.67□□□□□ -1.34
LDB7YBL006C SEC14P24280 304 aaKnown RBP6.67□□□□□ -1.34
LDB7YBL006C LDB16P25587 256 aa6.67□□□□□ -1.34
LDB7YBL006C DPB3P27344 201 aa6.67□□□□□ -1.34
LDB7YBL006C SIN4P32259 974 aa6.67□□□□□ -1.34
LDB7YBL006C RIM1P32445 135 aaKnown RBP6.67□□□□□ -1.34
LDB7YBL006C SKT5P34226 696 aa6.67□□□□□ -1.34
LDB7YBL006C BYE1P36106 594 aa6.67□□□□□ -1.34
LDB7YBL006C MUP3P38734 546 aa6.67□□□□□ -1.34
LDB7YBL006C RGA1P39083 1007 aa6.67□□□□□ -1.34
LDB7YBL006C INA22P40576 216 aa6.67□□□□□ -1.34
LDB7YBL006C ELP2P42935 788 aa6.67□□□□□ -1.34
LDB7YBL006C STB2P46679 850 aa6.67□□□□□ -1.34
LDB7YBL006C YGR015CP53208 328 aa6.67□□□□□ -1.34
LDB7YBL006C GOT1Q03554 138 aa6.67□□□□□ -1.34
LDB7YBL006C ATG23Q06671 453 aa6.67□□□□□ -1.34
LDB7YBL006C ATG29Q12092 213 aa6.67□□□□□ -1.34
LDB7YBL006C MCD1Q12158 566 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 127.6 ms