RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C MRP4P32902 394 aa2.34□□□□□ -2.03
CLN3YAL040C CSE2P33308 149 aa2.34□□□□□ -2.03
CLN3YAL040C CNS1P33313 385 aa2.34□□□□□ -2.03
CLN3YAL040C YBL055CP34220 418 aaPredicted RBP2.34□□□□□ -2.03
CLN3YAL040C LAS1P36146 502 aaPredicted RBP2.34□□□□□ -2.03
CLN3YAL040C FAT1P38225 669 aa2.34□□□□□ -2.03
CLN3YAL040C YBP1P38315 674 aa2.34□□□□□ -2.03
CLN3YAL040C SRP68P38687 599 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C YHL026CP38740 315 aa2.34□□□□□ -2.03
CLN3YAL040C RRF1P38771 230 aa2.34□□□□□ -2.03
CLN3YAL040C YHR054CP38780 354 aa2.34□□□□□ -2.03
CLN3YAL040C YHR078WP38799 552 aa2.34□□□□□ -2.03
CLN3YAL040C DUN1P39009 513 aa2.34□□□□□ -2.03
CLN3YAL040C CCT2P39076 527 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C CIN4P39110 191 aa2.34□□□□□ -2.03
CLN3YAL040C STL1P39932 569 aa2.34□□□□□ -2.03
CLN3YAL040C YEL068CP39977 110 aa2.34□□□□□ -2.03
CLN3YAL040C YIL166CP40445 542 aa2.34□□□□□ -2.03
CLN3YAL040C RLP7P40693 322 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C MAF1P41910 395 aa2.34□□□□□ -2.03
CLN3YAL040C LAM5P43560 674 aa2.34□□□□□ -2.03
CLN3YAL040C CTK3P46963 296 aaPredicted RBP2.34□□□□□ -2.03
CLN3YAL040C UBC9P50623 157 aaPredicted RBP2.34□□□□□ -2.03
CLN3YAL040C OCA1P50946 238 aaPredicted RBP2.34□□□□□ -2.03
CLN3YAL040C ALT2P52892 507 aa2.34□□□□□ -2.03
CLN3YAL040C SAP4P53036 818 aa2.34□□□□□ -2.03
CLN3YAL040C NNF2P53253 936 aa2.34□□□□□ -2.03
CLN3YAL040C YGR250CP53316 781 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C VPS9P54787 451 aa2.34□□□□□ -2.03
CLN3YAL040C BET4Q00618 327 aa2.34□□□□□ -2.03
CLN3YAL040C MTD1Q02046 320 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C INA17Q02888 182 aa2.34□□□□□ -2.03
CLN3YAL040C UTP21Q06078 939 aaPredicted RBP2.34□□□□□ -2.03
CLN3YAL040C NOP6Q07623 225 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C DIS3Q08162 1001 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C VPS54Q12071 889 aa2.34□□□□□ -2.03
CLN3YAL040C MDM20Q12387 796 aaKnown RBP2.34□□□□□ -2.03
CLN3YAL040C YBR182C-AQ8TGU6 64 aa2.34□□□□□ -2.03
CLN3YAL040C FUM1P08417 488 aaKnown RBP2.34□□□□□ -2.04
CLN3YAL040C TUB3P09734 445 aaKnown RBP2.34□□□□□ -2.04
CLN3YAL040C PMS1P14242 873 aa2.34□□□□□ -2.04
CLN3YAL040C CBF1P17106 351 aa2.34□□□□□ -2.04
CLN3YAL040C EST1P17214 699 aaPredicted RBP2.34□□□□□ -2.04
CLN3YAL040C ADE2P21264 571 aaKnown RBP2.34□□□□□ -2.04
CLN3YAL040C TRX1P22217 103 aaKnown RBP2.34□□□□□ -2.04
CLN3YAL040C RSA4P25382 515 aaKnown RBP2.34□□□□□ -2.04
CLN3YAL040C SGF29P25554 259 aa2.34□□□□□ -2.04
CLN3YAL040C SEC1P30619 724 aaKnown RBP2.34□□□□□ -2.04
CLN3YAL040C TPS2P31688 896 aaKnown RBP2.34□□□□□ -2.04
CLN3YAL040C ERG3P32353 365 aa2.34□□□□□ -2.04
CLN3YAL040C UIP5P36137 443 aa2.34□□□□□ -2.04
CLN3YAL040C YBR056WP38081 501 aa2.34□□□□□ -2.04
CLN3YAL040C APN2P38207 520 aa2.34□□□□□ -2.04
CLN3YAL040C SIF2P38262 535 aa2.34□□□□□ -2.04
CLN3YAL040C SPP381P38282 291 aaPredicted RBP2.34□□□□□ -2.04
CLN3YAL040C VHC1P38329 1120 aa2.34□□□□□ -2.04
CLN3YAL040C TIF5P38431 405 aaKnown RBP2.34□□□□□ -2.04
CLN3YAL040C YLF2P38746 405 aa2.34□□□□□ -2.04
CLN3YAL040C YHR202WP38887 602 aa2.34□□□□□ -2.04
CLN3YAL040C FLC2P39719 783 aa2.34□□□□□ -2.04
CLN3YAL040C SSP120P39931 234 aaKnown RBP2.34□□□□□ -2.04
CLN3YAL040C PUG1P40100 303 aa2.34□□□□□ -2.04
CLN3YAL040C SMX2P40204 77 aaKnown RBP2.34□□□□□ -2.04
CLN3YAL040C FKH2P41813 862 aa2.34□□□□□ -2.04
CLN3YAL040C SNZ3P43545 298 aa2.34□□□□□ -2.04
CLN3YAL040C IRC5P43610 853 aa2.34□□□□□ -2.04
CLN3YAL040C MAD3P47074 515 aa2.34□□□□□ -2.04
CLN3YAL040C YJR039WP47107 1121 aa2.34□□□□□ -2.04
CLN3YAL040C YJR079WP47126 109 aa2.34□□□□□ -2.04
CLN3YAL040C YGL036WP53185 909 aaPredicted RBP2.34□□□□□ -2.04
CLN3YAL040C SNZ2P53824 298 aa2.34□□□□□ -2.04
CLN3YAL040C YNL134CP53912 376 aaKnown RBP2.34□□□□□ -2.04
CLN3YAL040C YNL058CP53947 316 aa2.34□□□□□ -2.04
CLN3YAL040C UTP6Q02354 440 aaKnown RBP2.34□□□□□ -2.04
CLN3YAL040C MUB1Q03162 620 aa2.34□□□□□ -2.04
CLN3YAL040C MZM1Q03429 123 aaPredicted RBP2.34□□□□□ -2.04
CLN3YAL040C IVY1Q04934 453 aa2.34□□□□□ -2.04
CLN3YAL040C APL5Q08951 932 aaKnown RBP2.34□□□□□ -2.04
CLN3YAL040C SGT2Q12118 346 aaKnown RBP2.34□□□□□ -2.04
CLN3YAL040C RRD2Q12461 358 aa2.34□□□□□ -2.04
CLN3YAL040C PCD1Q12524 340 aa2.34□□□□□ -2.04
CLN3YAL040C YDR524C-BQ3E6R4 66 aa2.34□□□□□ -2.04
CLN3YAL040C PHO5P00635 467 aa2.33□□□□□ -2.04
CLN3YAL040C TPK1P06244 397 aa2.33□□□□□ -2.04
CLN3YAL040C CMD1P06787 147 aaKnown RBP2.33□□□□□ -2.04
CLN3YAL040C ADE3P07245 946 aaKnown RBP2.33□□□□□ -2.04
CLN3YAL040C ADH4P10127 382 aa2.33□□□□□ -2.04
CLN3YAL040C CDC26P14724 124 aa2.33□□□□□ -2.04
CLN3YAL040C CKA1P15790 372 aa2.33□□□□□ -2.04
CLN3YAL040C ACO1P19414 778 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
CLN3YAL040C MGT1P26188 188 aa2.33□□□□□ -2.04
CLN3YAL040C FRE1P32791 686 aa2.33□□□□□ -2.04
CLN3YAL040C GCS1P35197 352 aa2.33□□□□□ -2.04
CLN3YAL040C CAB3P36076 571 aa2.33□□□□□ -2.04
CLN3YAL040C YKR051WP36142 418 aa2.33□□□□□ -2.04
CLN3YAL040C MRPL7P36519 292 aa2.33□□□□□ -2.04
CLN3YAL040C DUG2P38149 878 aa2.33□□□□□ -2.04
CLN3YAL040C GDT1P38301 280 aaPredicted RBP2.33□□□□□ -2.04
CLN3YAL040C YBR225WP38321 900 aa2.33□□□□□ -2.04
CLN3YAL040C PCA1P38360 1216 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 54.1 ms