RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 CFD1P40558 293 aa8.49□□□□□ -1.05
NME1NME1 HOS2P53096 452 aaPredicted RBP8.49□□□□□ -1.05
NME1NME1 JJJ1P53863 590 aa8.49□□□□□ -1.05
NME1NME1 FIN1Q03898 291 aa8.49□□□□□ -1.05
NME1NME1 ATG26Q06321 1198 aa8.49□□□□□ -1.05
NME1NME1 RLM1Q12224 676 aa8.49□□□□□ -1.05
NME1NME1 GRX6Q12438 231 aa8.49□□□□□ -1.05
NME1NME1 PGA3Q12746 312 aaKnown RBP8.49□□□□□ -1.05
NME1NME1 TAD3Q9URQ3 322 aa8.49□□□□□ -1.05
NME1NME1 YAP1P19880 650 aaKnown RBP8.48□□□□□ -1.05
NME1NME1 GAC1P28006 793 aa8.48□□□□□ -1.05
NME1NME1 GPI10P30777 616 aa8.48□□□□□ -1.05
NME1NME1 NFU1P32860 256 aa8.48□□□□□ -1.05
NME1NME1 TOM71P38825 639 aaKnown RBP8.48□□□□□ -1.05
NME1NME1 YIL024CP40543 189 aa8.48□□□□□ -1.05
NME1NME1 PET130P47065 347 aa8.48□□□□□ -1.05
NME1NME1 VPS25P47142 202 aa8.48□□□□□ -1.05
NME1NME1 LGE1Q02796 332 aaKnown RBP8.48□□□□□ -1.05
NME1NME1 MCP2Q06567 569 aa8.48□□□□□ -1.05
NME1NME1 ERP4Q12450 207 aa8.48□□□□□ -1.05
NME1NME1 BUD5P25300 642 aaPredicted RBP8.47□□□□□ -1.05
NME1NME1 BYE1P36106 594 aa8.47□□□□□ -1.05
NME1NME1 RSM23Q01163 450 aa8.47□□□□□ -1.05
NME1NME1 ARP10Q04549 284 aa8.47□□□□□ -1.05
NME1NME1 ATG29Q12092 213 aa8.47□□□□□ -1.05
NME1NME1 RPB8P20436 146 aa8.46□□□□□ -1.06
NME1NME1 WBP1P33767 430 aaKnown RBP8.46□□□□□ -1.06
NME1NME1 VRG4P40107 337 aa8.46□□□□□ -1.06
NME1NME1 PSA1P41940 361 aaKnown RBP8.46□□□□□ -1.06
NME1NME1 SGF73P53165 657 aa8.46□□□□□ -1.06
NME1NME1 YMR155WQ03795 547 aa8.46□□□□□ -1.06
NME1NME1 CAC2Q04199 468 aa8.46□□□□□ -1.06
NME1NME1 CDC45Q08032 650 aa8.46□□□□□ -1.06
NME1NME1 RPS10AQ08745 105 aaPredicted RBP8.46□□□□□ -1.06
NME1NME1 PUT2P07275 575 aa8.45□□□□□ -1.06
NME1NME1 RPL32P38061 130 aaKnown RBP8.45□□□□□ -1.06
NME1NME1 SCO2P38072 301 aa8.45□□□□□ -1.06
NME1NME1 SMF1P38925 575 aa8.45□□□□□ -1.06
NME1NME1 LTP1P40347 161 aa8.45□□□□□ -1.06
NME1NME1 XBP1P40489 647 aa8.45□□□□□ -1.06
NME1NME1 GPD2P41911 440 aaKnown RBP8.45□□□□□ -1.06
NME1NME1 YPT11P48559 417 aa8.45□□□□□ -1.06
NME1NME1 TWF1P53250 332 aa8.45□□□□□ -1.06
NME1NME1 ADE13Q05911 482 aaKnown RBP8.45□□□□□ -1.06
NME1NME1 MRD1Q06106 887 aaKnown RBP8.45□□□□□ -1.06
NME1NME1 MRE11P32829 692 aa8.44□□□□□ -1.06
NME1NME1 CIN4P39110 191 aa8.44□□□□□ -1.06
NME1NME1 RPS10BP46784 105 aaKnown RBP8.44□□□□□ -1.06
NME1NME1 RPC11Q04307 110 aaPredicted RBP8.44□□□□□ -1.06
NME1NME1 POS5Q06892 414 aa8.44□□□□□ -1.06
NME1NME1 PRD1P25375 712 aa8.43□□□□□ -1.06
NME1NME1 SUI2P20459 304 aaKnown RBP8.42□□□□□ -1.06
NME1NME1 YME1P32795 747 aa8.42□□□□□ -1.06
NME1NME1 CMC1P36064 111 aa8.42□□□□□ -1.06
NME1NME1 ARP1P38696 384 aa8.42□□□□□ -1.06
NME1NME1 OTU2P38747 307 aaKnown RBP8.42□□□□□ -1.06
NME1NME1 FLO5P38894 1075 aa8.42□□□□□ -1.06
NME1NME1 SEC39Q12745 709 aa8.42□□□□□ -1.06
NME1NME1 CLB3P24870 427 aa8.41□□□□□ -1.06
NME1NME1 MSR1P38714 643 aa8.41□□□□□ -1.06
NME1NME1 UBA4P38820 440 aa8.41□□□□□ -1.06
NME1NME1 LSM5P40089 93 aaKnown RBP8.41□□□□□ -1.06
NME1NME1 YIL060WP40519 144 aa8.41□□□□□ -1.06
NME1NME1 SNF3P10870 884 aa8.4□□□□□ -1.06
NME1NME1 RKM3P38222 552 aa8.4□□□□□ -1.06
NME1NME1 AXL1P40851 1208 aa8.4□□□□□ -1.06
NME1NME1 MSC1Q03104 513 aa8.4□□□□□ -1.06
NME1NME1 CTL1Q03220 320 aaKnown RBP8.4□□□□□ -1.06
NME1NME1 YDL218WQ07629 317 aa8.4□□□□□ -1.06
NME1NME1 EDE1P34216 1381 aa8.39□□□□□ -1.07
NME1NME1 YML133CQ03099 1374 aa8.39□□□□□ -1.07
NME1NME1 YLL067CQ07888 1374 aa8.39□□□□□ -1.07
NME1NME1 YLL066CQ99208 1374 aa8.39□□□□□ -1.07
NME1NME1 MTR2P34232 184 aaKnown RBP8.39□□□□□ -1.07
NME1NME1 HXT9P40885 567 aa8.39□□□□□ -1.07
NME1NME1 PYK2P52489 506 aaKnown RBP8.39□□□□□ -1.07
NME1NME1 YGR126WP53274 230 aa8.39□□□□□ -1.07
NME1NME1 RQC1Q05468 723 aaKnown RBP8.39□□□□□ -1.07
NME1NME1 PTP1P25044 335 aa8.38□□□□□ -1.07
NME1NME1 PMT1P33775 817 aa8.38□□□□□ -1.07
NME1NME1 ROT2P38138 954 aa8.38□□□□□ -1.07
NME1NME1 DUG3P53871 357 aa8.38□□□□□ -1.07
NME1NME1 RDR1Q08904 546 aa8.38□□□□□ -1.07
NME1NME1 YLR112WQ12130 139 aa8.38□□□□□ -1.07
NME1NME1 PDX1P16451 410 aa8.37□□□□□ -1.07
NME1NME1 RPC53P25441 422 aa8.37□□□□□ -1.07
NME1NME1 HXT14P42833 540 aa8.37□□□□□ -1.07
NME1NME1 STB2P46679 850 aa8.37□□□□□ -1.07
NME1NME1 BNA3P47039 444 aaKnown RBP8.37□□□□□ -1.07
NME1NME1 YGR250CP53316 781 aaKnown RBP8.37□□□□□ -1.07
NME1NME1 YNL234WP53857 426 aa8.37□□□□□ -1.07
NME1NME1 ATX2Q12067 313 aa8.37□□□□□ -1.07
NME1NME1 PUF2Q12221 1075 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
NME1NME1 YOL159C-AQ3E769 90 aa8.37□□□□□ -1.07
NME1NME1 PAP1P29468 568 aaKnown RBP8.36□□□□□ -1.07
NME1NME1 SEC66P33754 206 aa8.36□□□□□ -1.07
NME1NME1 SAS3P34218 831 aa8.36□□□□□ -1.07
NME1NME1 YMR124WP39523 943 aaKnown RBP8.36□□□□□ -1.07
NME1NME1 PHO90P39535 881 aa8.36□□□□□ -1.07
NME1NME1 TOF2Q02208 771 aa8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms