RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 PCF11P39081 626 aaPredicted RBP8.59□□□□□ -1.03
LSR1LSR1 YEL023CP39992 682 aa8.59□□□□□ -1.03
LSR1LSR1 NAS6P50086 228 aa8.59□□□□□ -1.03
LSR1LSR1 TRM112P53738 135 aaPredicted RBP8.59□□□□□ -1.03
LSR1LSR1 YNL095CP53932 642 aa8.59□□□□□ -1.03
LSR1LSR1 RSC4Q02206 625 aa8.59□□□□□ -1.03
LSR1LSR1 YMR099CQ03161 297 aaKnown RBP8.59□□□□□ -1.03
LSR1LSR1 RCO1Q04779 684 aa8.59□□□□□ -1.03
LSR1LSR1 SLF1Q12034 447 aaKnown RBP8.59□□□□□ -1.03
LSR1LSR1 ICT1Q12385 394 aa8.59□□□□□ -1.03
LSR1LSR1 VCX1Q99385 411 aa8.59□□□□□ -1.03
LSR1LSR1 COS2P0CX12 379 aa8.58□□□□□ -1.04
LSR1LSR1 COS3P0CX13 379 aa8.58□□□□□ -1.04
LSR1LSR1 DMC1P25453 334 aa8.58□□□□□ -1.04
LSR1LSR1 COQ8P27697 501 aa8.58□□□□□ -1.04
LSR1LSR1 IMP3P32899 183 aaPredicted RBP8.58□□□□□ -1.04
LSR1LSR1 YBR225WP38321 900 aa8.58□□□□□ -1.04
LSR1LSR1 ARP1P38696 384 aa8.58□□□□□ -1.04
LSR1LSR1 YRB2P40517 327 aa8.58□□□□□ -1.04
LSR1LSR1 FKH2P41813 862 aa8.58□□□□□ -1.04
LSR1LSR1 COS4P43542 379 aa8.58□□□□□ -1.04
LSR1LSR1 RPA14P50106 137 aa8.58□□□□□ -1.04
LSR1LSR1 SAP4P53036 818 aa8.58□□□□□ -1.04
LSR1LSR1 EFM5P53200 248 aaKnown RBP8.58□□□□□ -1.04
LSR1LSR1 EFM6P53970 246 aa8.58□□□□□ -1.04
LSR1LSR1 SED5Q01590 340 aa8.58□□□□□ -1.04
LSR1LSR1 TOF2Q02208 771 aa8.58□□□□□ -1.04
LSR1LSR1 NHP10Q03435 203 aa8.58□□□□□ -1.04
LSR1LSR1 YDR132CQ03900 495 aa8.58□□□□□ -1.04
LSR1LSR1 YMR111CQ04461 462 aaPredicted RBP8.58□□□□□ -1.04
LSR1LSR1 SSQ1Q05931 657 aaPredicted RBP8.58□□□□□ -1.04
LSR1LSR1 GYP1Q08484 637 aa8.58□□□□□ -1.04
LSR1LSR1 UAF30Q08747 228 aa8.58□□□□□ -1.04
LSR1LSR1 LEA1Q08963 238 aaPredicted RBP8.58□□□□□ -1.04
LSR1LSR1 JLP1Q12358 412 aa8.58□□□□□ -1.04
LSR1LSR1 AHA1Q12449 350 aaKnown RBP8.58□□□□□ -1.04
LSR1LSR1 REP1P03871 373 aa8.57□□□□□ -1.04
LSR1LSR1 FBA1P14540 359 aaKnown RBP8.57□□□□□ -1.04
LSR1LSR1 EMC1P25574 760 aa8.57□□□□□ -1.04
LSR1LSR1 TFB1P32776 642 aa8.57□□□□□ -1.04
LSR1LSR1 SLX1P38324 304 aa8.57□□□□□ -1.04
LSR1LSR1 YHR045WP38775 560 aa8.57□□□□□ -1.04
LSR1LSR1 YHR202WP38887 602 aa8.57□□□□□ -1.04
LSR1LSR1 AVT6P40074 448 aa8.57□□□□□ -1.04
LSR1LSR1 RIC1P40395 1056 aa8.57□□□□□ -1.04
LSR1LSR1 IRR1P40541 1150 aa8.57□□□□□ -1.04
LSR1LSR1 ELP2P42935 788 aa8.57□□□□□ -1.04
LSR1LSR1 YGL176CP46945 554 aa8.57□□□□□ -1.04
LSR1LSR1 PET130P47065 347 aa8.57□□□□□ -1.04
LSR1LSR1 MET13P53128 600 aa8.57□□□□□ -1.04
LSR1LSR1 COP1P53622 1201 aaKnown RBP8.57□□□□□ -1.04
LSR1LSR1 REG1Q00816 1014 aa8.57□□□□□ -1.04
LSR1LSR1 SPR6Q01684 191 aa8.57□□□□□ -1.04
LSR1LSR1 FMP30Q02883 468 aa8.57□□□□□ -1.04
LSR1LSR1 SVL3Q03088 825 aaKnown RBP8.57□□□□□ -1.04
LSR1LSR1 KRE28Q04431 385 aa8.57□□□□□ -1.04
LSR1LSR1 YDL114WQ07530 308 aa8.57□□□□□ -1.04
LSR1LSR1 UBR1P19812 1950 aa8.57□□□□□ -1.04
LSR1LSR1 ARG3P05150 338 aa8.56□□□□□ -1.04
LSR1LSR1 SPT3P06844 337 aa8.56□□□□□ -1.04
LSR1LSR1 SPS1P08458 490 aa8.56□□□□□ -1.04
LSR1LSR1 MSS116P15424 664 aaKnown RBP8.56□□□□□ -1.04
LSR1LSR1 GUK1P15454 187 aaKnown RBP8.56□□□□□ -1.04
LSR1LSR1 YAP1P19880 650 aaKnown RBP8.56□□□□□ -1.04
LSR1LSR1 SGF29P25554 259 aa8.56□□□□□ -1.04
LSR1LSR1 MET22P32179 357 aa8.56□□□□□ -1.04
LSR1LSR1 SAC1P32368 623 aaKnown RBP8.56□□□□□ -1.04
LSR1LSR1 RPS1AP33442 255 aaKnown RBP8.56□□□□□ -1.04
LSR1LSR1 MRPL17P36528 281 aa8.56□□□□□ -1.04
LSR1LSR1 APE4P38821 490 aa8.56□□□□□ -1.04
LSR1LSR1 ACO2P39533 789 aa8.56□□□□□ -1.04
LSR1LSR1 VAC8P39968 578 aa8.56□□□□□ -1.04
LSR1LSR1 RGI2P40188 164 aa8.56□□□□□ -1.04
LSR1LSR1 IRC5P43610 853 aa8.56□□□□□ -1.04
LSR1LSR1 NUP85P46673 744 aa8.56□□□□□ -1.04
LSR1LSR1 TY4A-JP47023 414 aa8.56□□□□□ -1.04
LSR1LSR1 TIS11P47977 285 aa8.56□□□□□ -1.04
LSR1LSR1 MTR3P48240 250 aaPredicted RBP8.56□□□□□ -1.04
LSR1LSR1 YGR035CP53222 116 aa8.56□□□□□ -1.04
LSR1LSR1 MMT1Q03218 510 aa8.56□□□□□ -1.04
LSR1LSR1 RPN4Q03465 531 aa8.56□□□□□ -1.04
LSR1LSR1 CLU1Q03690 1277 aaKnown RBP8.56□□□□□ -1.04
LSR1LSR1 RAD33Q04231 177 aa8.56□□□□□ -1.04
LSR1LSR1 ENT2Q05785 613 aa8.56□□□□□ -1.04
LSR1LSR1 MCM21Q06675 368 aa8.56□□□□□ -1.04
LSR1LSR1 VAM6Q07468 1049 aa8.56□□□□□ -1.04
LSR1LSR1 YOR131CQ12486 218 aa8.56□□□□□ -1.04
LSR1LSR1 BRR1Q99177 341 aaPredicted RBP8.56□□□□□ -1.04
LSR1LSR1 CBP2P03874 630 aaPredicted RBP8.55□□□□□ -1.04
LSR1LSR1 ARG81P05085 880 aa8.55□□□□□ -1.04
LSR1LSR1 RPS4AP0CX35 261 aaKnown RBP8.55□□□□□ -1.04
LSR1LSR1 RPS4BP0CX36 261 aaKnown RBP8.55□□□□□ -1.04
LSR1LSR1 RAP1P11938 827 aa8.55□□□□□ -1.04
LSR1LSR1 TOP3P13099 656 aa8.55□□□□□ -1.04
LSR1LSR1 DCC1P25559 380 aa8.55□□□□□ -1.04
LSR1LSR1 APE2P32454 952 aaKnown RBP8.55□□□□□ -1.04
LSR1LSR1 ATO2P32907 282 aa8.55□□□□□ -1.04
LSR1LSR1 TPO5P36029 618 aa8.55□□□□□ -1.04
LSR1LSR1 YKR051WP36142 418 aa8.55□□□□□ -1.04
LSR1LSR1 EDS1P38073 919 aa8.55□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms