RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 SPA17Q15506 151 aa16.18■□□□□ 0.18
PTBP1-221ENST00000635647 CCDC70Q6NSX1 233 aa16.18■□□□□ 0.18
PTBP1-221ENST00000635647 RASGRP2Q7LDG7 609 aa16.18■□□□□ 0.18
PTBP1-221ENST00000635647 RIOK1Q9BRS2 568 aaKnown RBP16.18■□□□□ 0.18
PTBP1-221ENST00000635647 B4DLN1 442 aa16.17■□□□□ 0.18
PTBP1-221ENST00000635647 PARP1P09874 1014 aaKnown RBP16.17■□□□□ 0.18
PTBP1-221ENST00000635647 NAA15Q9BXJ9 866 aaKnown RBP16.17■□□□□ 0.18
PTBP1-221ENST00000635647 XDHP47989 1333 aa16.17■□□□□ 0.18
PTBP1-221ENST00000635647 DDAH1O94760 285 aa16.17■□□□□ 0.18
PTBP1-221ENST00000635647 CLEC10AQ8IUN9 316 aa16.17■□□□□ 0.18
PTBP1-221ENST00000635647 SRGAP2O75044 1071 aa16.17■□□□□ 0.18
PTBP1-221ENST00000635647 SASH3O75995 380 aa16.17■□□□□ 0.18
PTBP1-221ENST00000635647 SCNN1DP51172 638 aa16.17■□□□□ 0.18
PTBP1-221ENST00000635647 TCP11X2Q5H9J9 407 aa16.17■□□□□ 0.18
PTBP1-221ENST00000635647 SHISA4Q96DD7 197 aa16.17■□□□□ 0.18
PTBP1-221ENST00000635647 RUFY1Q96T51 708 aa16.17■□□□□ 0.18
PTBP1-221ENST00000635647 SLC39A2Q9NP94 309 aa16.17■□□□□ 0.18
PTBP1-221ENST00000635647 HDAC6Q9UBN7 1215 aa16.17■□□□□ 0.18
PTBP1-221ENST00000635647 EPN1Q9Y6I3 576 aaPredicted RBP16.17■□□□□ 0.18
PTBP1-221ENST00000635647 CACNB1Q02641 598 aaPredicted RBP16.16■□□□□ 0.18
PTBP1-221ENST00000635647 CCDC40Q4G0X9 1142 aa16.16■□□□□ 0.18
PTBP1-221ENST00000635647 ICE2Q659A1 982 aa16.16■□□□□ 0.18
PTBP1-221ENST00000635647 TBC1D9BQ66K14 1250 aa16.16■□□□□ 0.18
PTBP1-221ENST00000635647 CRACR2AQ9BSW2 395 aa16.16■□□□□ 0.18
PTBP1-221ENST00000635647 ABHD10Q9NUJ1 306 aa16.16■□□□□ 0.18
PTBP1-221ENST00000635647 ADAMTS3O15072 1205 aa16.16■□□□□ 0.18
PTBP1-221ENST00000635647 ATP2C1P98194 919 aaPredicted RBP16.16■□□□□ 0.18
PTBP1-221ENST00000635647 CYP27A1Q02318 531 aa16.16■□□□□ 0.18
PTBP1-221ENST00000635647 NELFCDQ8IXH7 590 aa16.16■□□□□ 0.18
PTBP1-221ENST00000635647 CALML4Q96GE6 196 aa16.16■□□□□ 0.18
PTBP1-221ENST00000635647 NSUN4Q96CB9 384 aaKnown RBP16.16■□□□□ 0.18
PTBP1-221ENST00000635647 BRIP1Q9BX63 1249 aa16.16■□□□□ 0.18
PTBP1-221ENST00000635647 TBC1D8O95759 1140 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 OR8K1Q8NGG5 319 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 ABCB6Q9NP58 842 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 NLRC4Q9NPP4 1024 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 BCL9O00512 1426 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 ABCC6O95255 1503 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 KLRF2D3W0D1 207 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 LRRC41Q15345 812 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 NT5DC1Q5TFE4 455 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 ZNF658Q5TYW1 1059 aaPredicted RBP16.15■□□□□ 0.18
PTBP1-221ENST00000635647 BSDC1Q9NW68 430 aaPredicted RBP16.15■□□□□ 0.18
PTBP1-221ENST00000635647 FAN1Q9Y2M0 1017 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 CNTNAP5Q8WYK1 1306 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 LIG3P49916 1009 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 HDXQ7Z353 690 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 TXNRD3Q86VQ6 643 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 CNBD1Q8NA66 436 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 PYM1Q9BRP8 204 aaKnown RBP16.15■□□□□ 0.18
PTBP1-221ENST00000635647 NOC4LQ9BVI4 516 aaKnown RBP16.15■□□□□ 0.18
PTBP1-221ENST00000635647 MYO6Q9UM54 1294 aa16.15■□□□□ 0.18
PTBP1-221ENST00000635647 TNS2Q63HR2 1409 aa16.14■□□□□ 0.18
PTBP1-221ENST00000635647 TTC26A0AVF1 554 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 ZNF76P36508 570 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 ERVK-24P63145 666 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 PFKFB3Q16875 520 aaPredicted RBP16.14■□□□□ 0.17
PTBP1-221ENST00000635647 SLC51AQ86UW1 340 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 KIFC2Q96AC6 838 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 KANSL2Q9H9L4 492 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.14■□□□□ 0.175e-7■■■■■ 80.5
PTBP1-221ENST00000635647 RWDD2AQ9UIY3 292 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 RNF225M0QZC1 329 aaPredicted RBP16.14■□□□□ 0.17
PTBP1-221ENST00000635647 IVLP07476 585 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 GTF2IP78347 998 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 GOLGA5Q8TBA6 731 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 ZNF804BA4D1E1 1349 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 LMTK3Q96Q04 1460 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 SMCO2A6NFE2 343 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 ACTN2P35609 894 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 SLC16A2P36021 539 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 CABP7Q86V35 215 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 MARCH10Q8NA82 808 aaPredicted RBP16.14■□□□□ 0.17
PTBP1-221ENST00000635647 COA7Q96BR5 231 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 TMEM60Q9H2L4 133 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 ACBD3Q9H3P7 528 aa16.14■□□□□ 0.17
PTBP1-221ENST00000635647 ARPP21Q9UBL0 812 aaPredicted RBP16.14■□□□□ 0.17
PTBP1-221ENST00000635647 PPP1R1BQ9UD71 204 aaPredicted RBP16.14■□□□□ 0.17
PTBP1-221ENST00000635647 EP400NLQ6ZTU2 488 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 SMARCC1Q92922 1105 aaPredicted RBP16.13■□□□□ 0.17
PTBP1-221ENST00000635647 GJA10Q969M2 543 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 CCDC42Q96M95 316 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 EFCC1Q9HA90 598 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 ATRNO75882 1429 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 DCCP43146 1447 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 UBAP1LF5GYI3 381 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 DOK7Q18PE1 504 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 MFSD14BQ5SR56 506 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 SH3RF3Q8TEJ3 882 aaPredicted RBP16.13■□□□□ 0.17
PTBP1-221ENST00000635647 DISC1Q9NRI5 854 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 PCDHA4Q9UN74 947 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 ALS2Q96Q42 1657 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 FAM196BA6NMK8 535 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 NDUFA10O95299 355 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 TYW1BQ6NUM6 668 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 PTF1AQ7RTS3 328 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 JAKMIP2Q96AA8 810 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 EYA3Q99504 573 aa16.13■□□□□ 0.17
PTBP1-221ENST00000635647 BMP2KQ9NSY1 1161 aaPredicted RBP16.13■□□□□ 0.17
PTBP1-221ENST00000635647 ATP8A2Q9NTI2 1148 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms