RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 BRCA2P51587 3418 aa22.05■■□□□ 1.12
SUSD3-205ENST00000617293 PGK2P07205 417 aa22.04■■□□□ 1.12
SUSD3-205ENST00000617293 ALAS1P13196 640 aa22.04■■□□□ 1.12
SUSD3-205ENST00000617293 EN2P19622 333 aaPredicted RBP22.04■■□□□ 1.12
SUSD3-205ENST00000617293 COL9A3Q14050 684 aaPredicted RBP22.04■■□□□ 1.12
SUSD3-205ENST00000617293 RASEFQ8IZ41 740 aa22.04■■□□□ 1.12
SUSD3-205ENST00000617293 CHST13Q8NET6 341 aa22.04■■□□□ 1.12
SUSD3-205ENST00000617293 DDX11Q96FC9 970 aa22.04■■□□□ 1.12
SUSD3-205ENST00000617293 NEK1Q96PY6 1258 aa22.04■■□□□ 1.12
SUSD3-205ENST00000617293 FBXO40Q9UH90 709 aa22.04■■□□□ 1.12
SUSD3-205ENST00000617293 CCPG1Q9ULG6 757 aa22.04■■□□□ 1.12
SUSD3-205ENST00000617293 KIAA0100Q14667 2235 aaKnown RBP22.03■■□□□ 1.12
SUSD3-205ENST00000617293 PRKAR2AP13861 404 aaKnown RBP22.03■■□□□ 1.12
SUSD3-205ENST00000617293 RGS19P49795 217 aa22.03■■□□□ 1.12
SUSD3-205ENST00000617293 MFSD14CQ5VZR4 134 aa22.03■■□□□ 1.12
SUSD3-205ENST00000617293 TRERF1Q96PN7 1200 aa22.03■■□□□ 1.12
SUSD3-205ENST00000617293 HMX1Q9NP08 348 aaPredicted RBP22.03■■□□□ 1.12
SUSD3-205ENST00000617293 GPHNQ9NQX3 736 aaPredicted RBP22.03■■□□□ 1.12
SUSD3-205ENST00000617293 ZNF236Q9UL36 1845 aa22.03■■□□□ 1.12
SUSD3-205ENST00000617293 RPTORQ8N122 1335 aa22.03■■□□□ 1.12
SUSD3-205ENST00000617293 ICAM1P05362 532 aa22.02■■□□□ 1.12
SUSD3-205ENST00000617293 CACNB2Q08289 660 aaPredicted RBP22.02■■□□□ 1.12
SUSD3-205ENST00000617293 TKFCQ3LXA3 575 aa22.02■■□□□ 1.12
SUSD3-205ENST00000617293 TSGA10IPQ3SY00 556 aa22.02■■□□□ 1.12
SUSD3-205ENST00000617293 CATIPQ7Z7H3 387 aa22.02■■□□□ 1.12
SUSD3-205ENST00000617293 ANKRD35Q8N283 1001 aa22.02■■□□□ 1.12
SUSD3-205ENST00000617293 STAG2Q8N3U4 1231 aa22.02■■□□□ 1.12
SUSD3-205ENST00000617293 TMEM87BQ96K49 555 aa22.02■■□□□ 1.12
SUSD3-205ENST00000617293 MTA3Q9BTC8 594 aa22.02■■□□□ 1.12
SUSD3-205ENST00000617293 ACAD9Q9H845 621 aa22.02■■□□□ 1.12
SUSD3-205ENST00000617293 LY9Q9HBG7 655 aa22.02■■□□□ 1.12
SUSD3-205ENST00000617293 RNF146Q9NTX7 359 aa22.02■■□□□ 1.12
SUSD3-205ENST00000617293 DHX16O60231 1041 aaKnown RBP22.01■■□□□ 1.11
SUSD3-205ENST00000617293 GJB1P08034 283 aa22.01■■□□□ 1.11
SUSD3-205ENST00000617293 TAL1P17542 331 aaPredicted RBP22.01■■□□□ 1.11
SUSD3-205ENST00000617293 CYP2C19P33261 490 aa22.01■■□□□ 1.11
SUSD3-205ENST00000617293 HSPA4P34932 840 aa22.01■■□□□ 1.11
SUSD3-205ENST00000617293 KRT32Q14532 448 aa22.01■■□□□ 1.11
SUSD3-205ENST00000617293 ADCK5Q3MIX3 580 aa22.01■■□□□ 1.11
SUSD3-205ENST00000617293 NFXL1Q6ZNB6 911 aa22.01■■□□□ 1.11
SUSD3-205ENST00000617293 MAML3Q96JK9 1138 aa22.01■■□□□ 1.11
SUSD3-205ENST00000617293 DEFB118Q96PH6 123 aa22.01■■□□□ 1.11
SUSD3-205ENST00000617293 LRRC2Q9BYS8 371 aa22.01■■□□□ 1.11
SUSD3-205ENST00000617293 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.01■■□□□ 1.11
SUSD3-205ENST00000617293 VAT1LQ9HCJ6 419 aa22.01■■□□□ 1.11
SUSD3-205ENST00000617293 RBBP6Q7Z6E9 1792 aaKnown RBP22.01■■□□□ 1.11
SUSD3-205ENST00000617293 SMCHD1A6NHR9 2005 aa22.01■■□□□ 1.11
SUSD3-205ENST00000617293 ZNF792Q3KQV3 632 aa22■■□□□ 1.11
SUSD3-205ENST00000617293 MAP3K21Q5TCX8 1036 aa22■■□□□ 1.11
SUSD3-205ENST00000617293 OLFML2BQ68BL8 750 aa22■■□□□ 1.11
SUSD3-205ENST00000617293 ADGRF4Q8IZF3 695 aa22■■□□□ 1.11
SUSD3-205ENST00000617293 TMTC2Q8N394 836 aa22■■□□□ 1.11
SUSD3-205ENST00000617293 NUP133Q8WUM0 1156 aa22■■□□□ 1.11
SUSD3-205ENST00000617293 PAK6Q9NQU5 681 aaPredicted RBP22■■□□□ 1.11
SUSD3-205ENST00000617293 MAD2L2Q9UI95 211 aa22■■□□□ 1.11
SUSD3-205ENST00000617293 PLXNA1Q9UIW2 1896 aa21.99■■□□□ 1.11
SUSD3-205ENST00000617293 PALM3A6NDB9 673 aaPredicted RBP21.99■■□□□ 1.11
SUSD3-205ENST00000617293 CCDC69A6NI79 296 aa21.99■■□□□ 1.11
SUSD3-205ENST00000617293 KLRF2D3W0D1 207 aa21.99■■□□□ 1.11
SUSD3-205ENST00000617293 SH2B2O14492 632 aaPredicted RBP21.99■■□□□ 1.11
SUSD3-205ENST00000617293 GJA8P48165 433 aa21.99■■□□□ 1.11
SUSD3-205ENST00000617293 TROAPQ12815 778 aa21.99■■□□□ 1.11
SUSD3-205ENST00000617293 GRM4Q14833 912 aa21.99■■□□□ 1.11
SUSD3-205ENST00000617293 MUM1L1Q5H9M0 696 aa21.99■■□□□ 1.11
SUSD3-205ENST00000617293 U2AF1L4Q8WU68 220 aaKnown RBP21.99■■□□□ 1.11
SUSD3-205ENST00000617293 DIS3Q9Y2L1 958 aaKnown RBP21.99■■□□□ 1.11
SUSD3-205ENST00000617293 SGPL1O95470 568 aa21.98■■□□□ 1.11
SUSD3-205ENST00000617293 CCND3P30281 292 aaPredicted RBP21.98■■□□□ 1.11
SUSD3-205ENST00000617293 MLLT1Q03111 559 aaPredicted RBP21.98■■□□□ 1.11
SUSD3-205ENST00000617293 CDC37Q16543 378 aaPredicted RBP21.98■■□□□ 1.11
SUSD3-205ENST00000617293 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.98■■□□□ 1.11
SUSD3-205ENST00000617293 DHX32Q7L7V1 743 aaKnown RBP21.98■■□□□ 1.11
SUSD3-205ENST00000617293 ZNF654Q8IZM8 581 aa21.98■■□□□ 1.11
SUSD3-205ENST00000617293 KCNB2Q92953 911 aa21.98■■□□□ 1.11
SUSD3-205ENST00000617293 TCEANC2Q96MN5 208 aa21.98■■□□□ 1.11
SUSD3-205ENST00000617293 MYL10Q9BUA6 226 aa21.98■■□□□ 1.11
SUSD3-205ENST00000617293 PNMA2Q9UL42 364 aa21.98■■□□□ 1.11
SUSD3-205ENST00000617293 SNX14Q9Y5W7 946 aa21.98■■□□□ 1.11
SUSD3-205ENST00000617293 DNAJC25-GNG10A0A024R161 153 aa21.97■■□□□ 1.11
SUSD3-205ENST00000617293 TFRCP02786 760 aaKnown RBP21.97■■□□□ 1.11
SUSD3-205ENST00000617293 LIFRP42702 1097 aa21.97■■□□□ 1.11
SUSD3-205ENST00000617293 JAKMIP1Q96N16 626 aaKnown RBP21.97■■□□□ 1.11
SUSD3-205ENST00000617293 USP26Q9BXU7 913 aa21.97■■□□□ 1.11
SUSD3-205ENST00000617293 JMJD4Q9H9V9 463 aa21.97■■□□□ 1.11
SUSD3-205ENST00000617293 A1CFQ9NQ94 594 aaKnown RBP21.97■■□□□ 1.11
SUSD3-205ENST00000617293 EPB41L2O43491 1005 aaKnown RBP21.96■■□□□ 1.11
SUSD3-205ENST00000617293 IGHA2P01877 340 aa21.96■■□□□ 1.11
SUSD3-205ENST00000617293 HMGB1P09429 215 aaKnown RBP21.96■■□□□ 1.11
SUSD3-205ENST00000617293 CNGA1P29973 690 aa21.96■■□□□ 1.11
SUSD3-205ENST00000617293 EXOSC10Q01780 885 aaKnown RBP21.96■■□□□ 1.11
SUSD3-205ENST00000617293 USH1GQ495M9 461 aa21.96■■□□□ 1.11
SUSD3-205ENST00000617293 NSMFQ6X4W1 530 aa21.96■■□□□ 1.11
SUSD3-205ENST00000617293 TINF2Q9BSI4 451 aa21.96■■□□□ 1.11
SUSD3-205ENST00000617293 POTEB2H3BUK9 544 aa21.95■■□□□ 1.1
SUSD3-205ENST00000617293 DDAH1O94760 285 aa21.95■■□□□ 1.1
SUSD3-205ENST00000617293 QRICH1Q2TAL8 776 aa21.95■■□□□ 1.1
SUSD3-205ENST00000617293 PRAMEF19Q5SWL8 479 aa21.95■■□□□ 1.1
SUSD3-205ENST00000617293 CTCFLQ8NI51 663 aaPredicted RBP21.95■■□□□ 1.1
SUSD3-205ENST00000617293 SHISA4Q96DD7 197 aa21.95■■□□□ 1.1
SUSD3-205ENST00000617293 SLC12A7Q9Y666 1083 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms