RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 FRMPD2Q68DX3 1309 aaPredicted RBP12.91□□□□□ -0.34
NSMCE1-210ENST00000565626 PGK1P00558 417 aa12.91□□□□□ -0.34
NSMCE1-210ENST00000565626 MAGEA10P43363 369 aaPredicted RBP12.91□□□□□ -0.34
NSMCE1-210ENST00000565626 MFAP1P55081 439 aaKnown RBP12.91□□□□□ -0.34
NSMCE1-210ENST00000565626 CNTN2Q02246 1040 aa12.91□□□□□ -0.34
NSMCE1-210ENST00000565626 LRRC41Q15345 812 aa12.91□□□□□ -0.34
NSMCE1-210ENST00000565626 ARRDC4Q8NCT1 418 aa12.91□□□□□ -0.34
NSMCE1-210ENST00000565626 CHST13Q8NET6 341 aa12.91□□□□□ -0.34
NSMCE1-210ENST00000565626 FERMT2Q96AC1 680 aa12.91□□□□□ -0.34
NSMCE1-210ENST00000565626 GDF15Q99988 308 aa12.91□□□□□ -0.34
NSMCE1-210ENST00000565626 GPCPD1Q9NPB8 672 aa12.91□□□□□ -0.34
NSMCE1-210ENST00000565626 RNF146Q9NTX7 359 aa12.91□□□□□ -0.34
NSMCE1-210ENST00000565626 TCP11L1Q9NUJ3 509 aa12.91□□□□□ -0.34
NSMCE1-210ENST00000565626 ZNF213O14771 459 aa12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 PLA2G6O60733 806 aa12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 RARBP10826 455 aa12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 ALAS1P13196 640 aa12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 ADCYAP1R1P41586 468 aa12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 MUM1L1Q5H9M0 696 aa12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 TTC22Q5TAA0 569 aa12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 DCAF4Q8WV16 495 aa12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 TRERF1Q96PN7 1200 aa12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 ACAD9Q9H845 621 aa12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 A1CFQ9NQ94 594 aaKnown RBP12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 XPNPEP3Q9NQH7 507 aa12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 FBXO40Q9UH90 709 aa12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 NRBP1Q9UHY1 535 aa12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 ZHX1Q9UKY1 873 aaPredicted RBP12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 CNPY2Q9Y2B0 182 aa12.9□□□□□ -0.34
NSMCE1-210ENST00000565626 PLXNA1Q9UIW2 1896 aa12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 SOWAHBA6NEL2 793 aa12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 B4E1Z4 1266 aa12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 KBTBD13C9JR72 458 aa12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 HIP1O00291 1037 aa12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 SOX1O00570 391 aaPredicted RBP12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 ADCY6O43306 1168 aa12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 FDX1P10109 184 aa12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 PDHBP11177 359 aa12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 RTP1P59025 263 aa12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 SYDE2Q5VT97 1194 aa12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 MAMDC4Q6UXC1 1216 aa12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 FAM133AQ8N9E0 248 aa12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 PURBQ96QR8 312 aaKnown RBP12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 RNF41Q9H4P4 317 aaPredicted RBP12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 ATP11BQ9Y2G3 1177 aa12.89□□□□□ -0.35
NSMCE1-210ENST00000565626 ASTN1O14525 1302 aa12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 SYNGAP1Q96PV0 1343 aa12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 POTEB2H3BUK9 544 aa12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 KDM4AO75164 1064 aa12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 GOLGA8HP0CJ92 632 aa12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 PCP11498 1178 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 AKR1A1P14550 325 aa12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 MDM2Q00987 491 aaPredicted RBP12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 ACVR2BQ13705 512 aa12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 BTNL9Q6UXG8 535 aa12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 SLC39A5Q6ZMH5 540 aa12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 ARMCX2Q7L311 632 aa12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 ZNF467Q7Z7K2 595 aaPredicted RBP12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 CCDC144CPQ8IYA2 1237 aa12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 MSL3Q8N5Y2 521 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 ESR2Q92731 530 aa12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 DSCC1Q9BVC3 393 aa12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 RANBP17Q9H2T7 1088 aaKnown RBP12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 CPVLQ9H3G5 476 aa12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 CCPG1Q9ULG6 757 aa12.88□□□□□ -0.35
NSMCE1-210ENST00000565626 MYADML2A6NDP7 307 aa12.87□□□□□ -0.35
NSMCE1-210ENST00000565626 ADAMTS4O75173 837 aa12.87□□□□□ -0.35
NSMCE1-210ENST00000565626 ICAM1P05362 532 aa12.87□□□□□ -0.35
NSMCE1-210ENST00000565626 PTGS1P23219 599 aa12.87□□□□□ -0.35
NSMCE1-210ENST00000565626 ZNF543Q08ER8 600 aa12.87□□□□□ -0.35
NSMCE1-210ENST00000565626 TKFCQ3LXA3 575 aa12.87□□□□□ -0.35
NSMCE1-210ENST00000565626 TRIM60Q495X7 471 aa12.87□□□□□ -0.35
NSMCE1-210ENST00000565626 TTC14Q96N46 770 aa12.87□□□□□ -0.35
NSMCE1-210ENST00000565626 KATNBL1Q9H079 304 aa12.87□□□□□ -0.35
NSMCE1-210ENST00000565626 PHF24Q9UPV7 400 aa12.87□□□□□ -0.35
NSMCE1-210ENST00000565626 SYNRGQ9UMZ2 1314 aa12.87□□□□□ -0.35
NSMCE1-210ENST00000565626 NFIBO00712 420 aa12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 SNHG28P0DPA3 235 aa12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 CHMLP26374 656 aa12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 BMP8BP34820 402 aa12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 PTH1RQ03431 593 aa12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 IMMTQ16891 758 aaKnown RBP12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 CCDC144BQ3MJ40 725 aa12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 NSMFQ6X4W1 530 aa12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 RNF180Q86T96 592 aa12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 SKAP1Q86WV1 359 aa12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 ENAHQ8N8S7 591 aaPredicted RBP12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 LRCH3Q96II8 777 aa12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 UBE2OQ9C0C9 1292 aaKnown RBP12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 CYP39A1Q9NYL5 469 aa12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 ZSWIM5Q9P217 1185 aa12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 FAM184BQ9ULE4 1060 aa12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 MCM3APO60318 1980 aa12.86□□□□□ -0.35
NSMCE1-210ENST00000565626 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 A0A1W2PQ45 241 aaPredicted RBP12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 A0A1W2PQY0 241 aa12.85□□□□□ -0.35
NSMCE1-210ENST00000565626 BAATQ14032 418 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms